BLASTX nr result

ID: Coptis21_contig00022559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022559
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271286.1| PREDICTED: dihydrolipoyllysine-residue acety...   108   1e-26
ref|XP_002526841.1| dihydrolipoamide acetyltransferase component...   107   3e-25
ref|XP_002325998.1| predicted protein [Populus trichocarpa] gi|2...   109   1e-24
gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [A...   104   4e-24
ref|XP_004160254.1| PREDICTED: dihydrolipoyllysine-residue acety...   107   6e-24

>ref|XP_002271286.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component
           of pyruvate dehydrogenase complex, mitochondrial-like
           isoform 1 [Vitis vinifera]
          Length = 477

 Score =  108 bits (271), Expect(2) = 1e-26
 Identities = 54/62 (87%), Positives = 58/62 (93%)
 Frame = +1

Query: 46  RRTKIQAKIREIFMSALSSTIIEGKIVSWIKSEGDKLLKGESVVVVESDKANMDVETFYD 225
           +RT IQAKIREIFM ALSST+ EGKIVSW+KSEGDKL KGESVVVVESDKA+MDVETFYD
Sbjct: 35  KRTTIQAKIREIFMPALSSTMTEGKIVSWVKSEGDKLSKGESVVVVESDKADMDVETFYD 94

Query: 226 GY 231
           GY
Sbjct: 95  GY 96



 Score = 37.0 bits (84), Expect(2) = 1e-26
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 16/72 (22%)
 Frame = +2

Query: 248 AIGSFIAYLAETKDEMDAARSKADS----------------EDGVAVSKEEKPIEASLET 379
           A+GS IA LAET+DE+  ARSKA++                E+ V   ++  P++A+  T
Sbjct: 109 AVGSAIALLAETEDEIAEARSKANTSPSSSPPSPAAAAAAPEESVGAPEKAAPVKAA-AT 167

Query: 380 VTIVSSILHHHP 415
           VT+       HP
Sbjct: 168 VTVAKMASSVHP 179


>ref|XP_002526841.1| dihydrolipoamide acetyltransferase component of pyruvate
           dehydrogenase, putative [Ricinus communis]
           gi|223533845|gb|EEF35576.1| dihydrolipoamide
           acetyltransferase component of pyruvate dehydrogenase,
           putative [Ricinus communis]
          Length = 473

 Score =  107 bits (268), Expect(2) = 3e-25
 Identities = 56/73 (76%), Positives = 60/73 (82%)
 Frame = +1

Query: 13  NPNFSSTPNPIRRTKIQAKIREIFMSALSSTIIEGKIVSWIKSEGDKLLKGESVVVVESD 192
           NP+F  +     R  I AKIREIFM ALSST+ EGKIVSWIKSEGDKL KGESVVVVESD
Sbjct: 21  NPSFHISHAHNTRVHINAKIREIFMPALSSTMTEGKIVSWIKSEGDKLSKGESVVVVESD 80

Query: 193 KANMDVETFYDGY 231
           KA+MDVETFYDGY
Sbjct: 81  KADMDVETFYDGY 93



 Score = 33.5 bits (75), Expect(2) = 3e-25
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +2

Query: 248 AIGSFIAYLAETKDEMDAARSKADS 322
           A+GS IA LAE+ DE+D A+SKA S
Sbjct: 106 AVGSAIALLAESPDEIDQAKSKASS 130


>ref|XP_002325998.1| predicted protein [Populus trichocarpa] gi|222862873|gb|EEF00380.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  109 bits (272), Expect(2) = 1e-24
 Identities = 56/74 (75%), Positives = 64/74 (86%), Gaps = 2/74 (2%)
 Frame = +1

Query: 16  PNFSSTPNPIR--RTKIQAKIREIFMSALSSTIIEGKIVSWIKSEGDKLLKGESVVVVES 189
           P  SS+P+ I   RT++ AKIREIFM ALSST+ EGKIV+W+KSEGDKL KGESVVVVES
Sbjct: 20  PCLSSSPSHISSSRTRVHAKIREIFMPALSSTMTEGKIVAWVKSEGDKLSKGESVVVVES 79

Query: 190 DKANMDVETFYDGY 231
           DKA+MDVETFYDGY
Sbjct: 80  DKADMDVETFYDGY 93



 Score = 30.0 bits (66), Expect(2) = 1e-24
 Identities = 14/23 (60%), Positives = 20/23 (86%)
 Frame = +2

Query: 248 AIGSFIAYLAETKDEMDAARSKA 316
           AIGS IA LAE+++E++ A+SKA
Sbjct: 106 AIGSAIALLAESQEEIEEAKSKA 128


>gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [Arabidopsis
           thaliana]
          Length = 464

 Score =  104 bits (259), Expect(2) = 4e-24
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = +1

Query: 58  IQAKIREIFMSALSSTIIEGKIVSWIKSEGDKLLKGESVVVVESDKANMDVETFYDGY 231
           IQAKIREIFM ALSST+ EGKIVSW+KSEGDKL KGESVVVVESDKA+MDVETFYDGY
Sbjct: 35  IQAKIREIFMPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGY 92



 Score = 33.5 bits (75), Expect(2) = 4e-24
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +2

Query: 251 IGSFIAYLAETKDEMDAARSKADSEDGVAVSKEEKPIEASLETVTIVSSI 400
           +GS IA LAET+DE+  A++KA    G      + P  AS  T T+V+ +
Sbjct: 106 VGSAIALLAETEDEIADAKAKASGGGG----DSKAPPPASPPTATVVAPV 151


>ref|XP_004160254.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component
           of pyruvate dehydrogenase complex-like [Cucumis sativus]
          Length = 464

 Score =  107 bits (268), Expect(2) = 6e-24
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +1

Query: 16  PNFSSTPNPIRRTKIQAKIREIFMSALSSTIIEGKIVSWIKSEGDKLLKGESVVVVESDK 195
           P+F S   P++   +QAKIREIFM ALSST+ EGKIVSWIK+EGDKL KGESVVVVESDK
Sbjct: 25  PSFHSIRRPLQ---VQAKIREIFMPALSSTMTEGKIVSWIKTEGDKLAKGESVVVVESDK 81

Query: 196 ANMDVETFYDGY 231
           A+MDVETFYDGY
Sbjct: 82  ADMDVETFYDGY 93



 Score = 29.3 bits (64), Expect(2) = 6e-24
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 251 IGSFIAYLAETKDEMDAARSKA 316
           +GS IA LAET+DE+  A+S+A
Sbjct: 107 VGSAIALLAETQDEISEAKSRA 128


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