BLASTX nr result

ID: Coptis21_contig00022544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022544
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus ...   206   8e-62
sp|P29696.1|LEU3_SOLTU RecName: Full=3-isopropylmalate dehydroge...   206   8e-62
ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] ca...   206   3e-61
emb|CBI32749.3| unnamed protein product [Vitis vinifera]              206   3e-61
gb|AAO61642.1| NAD-dependent isocitrate dehydrogenase alpha subu...   203   4e-61

>ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223541383|gb|EEF42934.1| isocitrate dehydrogenase,
           putative [Ricinus communis]
          Length = 364

 Score =  206 bits (523), Expect(2) = 8e-62
 Identities = 99/108 (91%), Positives = 104/108 (96%)
 Frame = -1

Query: 325 KGEYSGLEHQVVRGVVESLKIITSFASQRVAEYAFHYARTHGREKVSAIHKANIMRKTDG 146
           +GEYSGLEHQVVRGVVESLKIIT  AS RVAEYAFHYA+THGRE+VSAIHKANIM+KTDG
Sbjct: 152 EGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDG 211

Query: 145 LFLTCCREVAEKYPEIKYEEVIIDNCCMMLVKNPALFDVLVMPNLYGD 2
           LFL CCREVAEKYPEIKYEEV+IDNCCMMLVKNPALFDVLVMPNLYGD
Sbjct: 212 LFLKCCREVAEKYPEIKYEEVVIDNCCMMLVKNPALFDVLVMPNLYGD 259



 Score = 56.6 bits (135), Expect(2) = 8e-62
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 398 PCYSLSGYKTRYDDVNLVTIRENTEG 321
           PCYSL GYKTRYDDVNL+TIRENTEG
Sbjct: 128 PCYSLPGYKTRYDDVNLITIRENTEG 153


>sp|P29696.1|LEU3_SOLTU RecName: Full=3-isopropylmalate dehydrogenase, chloroplastic;
           Short=3-IPM-DH; Short=IMDH; AltName: Full=Beta-IPM
           dehydrogenase; Flags: Precursor gi|22643|emb|CAA47720.1|
           3-isopropylmalate dehydrogenase [Solanum tuberosum]
           gi|445064|prf||1908380A beta isopropylmalate
           dehydrogenase
          Length = 357

 Score =  206 bits (523), Expect(2) = 8e-62
 Identities = 99/108 (91%), Positives = 104/108 (96%)
 Frame = -1

Query: 325 KGEYSGLEHQVVRGVVESLKIITSFASQRVAEYAFHYARTHGREKVSAIHKANIMRKTDG 146
           +GEYSGLEHQVVRGVVESLKIIT  AS RVAEYAFHYA+THGRE+VSAIHKANIM+KTDG
Sbjct: 155 EGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDG 214

Query: 145 LFLTCCREVAEKYPEIKYEEVIIDNCCMMLVKNPALFDVLVMPNLYGD 2
           LFL CCREVAEKYPEIKYEEV+IDNCCMMLVKNPALFDVLVMPNLYGD
Sbjct: 215 LFLKCCREVAEKYPEIKYEEVVIDNCCMMLVKNPALFDVLVMPNLYGD 262



 Score = 56.6 bits (135), Expect(2) = 8e-62
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 398 PCYSLSGYKTRYDDVNLVTIRENTEG 321
           PCYSL GYKTRYDDVNL+TIRENTEG
Sbjct: 131 PCYSLPGYKTRYDDVNLITIRENTEG 156


>ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial-like [Vitis vinifera]
          Length = 367

 Score =  206 bits (523), Expect(2) = 3e-61
 Identities = 99/108 (91%), Positives = 104/108 (96%)
 Frame = -1

Query: 325 KGEYSGLEHQVVRGVVESLKIITSFASQRVAEYAFHYARTHGREKVSAIHKANIMRKTDG 146
           +GEYSGLEHQVVRGVVESLKIIT  AS RVAEYAFHYA+THGRE+VSAIHKANIM+KTDG
Sbjct: 155 EGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDG 214

Query: 145 LFLTCCREVAEKYPEIKYEEVIIDNCCMMLVKNPALFDVLVMPNLYGD 2
           LFL CCREVAEKYPEIKYEEV+IDNCCMMLVKNPALFDVLVMPNLYGD
Sbjct: 215 LFLKCCREVAEKYPEIKYEEVVIDNCCMMLVKNPALFDVLVMPNLYGD 262



 Score = 54.7 bits (130), Expect(2) = 3e-61
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -3

Query: 398 PCYSLSGYKTRYDDVNLVTIRENTEG 321
           PCYSL GYKTRYDDV+L+TIRENTEG
Sbjct: 131 PCYSLPGYKTRYDDVDLITIRENTEG 156


>emb|CBI32749.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  206 bits (523), Expect(2) = 3e-61
 Identities = 99/108 (91%), Positives = 104/108 (96%)
 Frame = -1

Query: 325 KGEYSGLEHQVVRGVVESLKIITSFASQRVAEYAFHYARTHGREKVSAIHKANIMRKTDG 146
           +GEYSGLEHQVVRGVVESLKIIT  AS RVAEYAFHYA+THGRE+VSAIHKANIM+KTDG
Sbjct: 154 EGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDG 213

Query: 145 LFLTCCREVAEKYPEIKYEEVIIDNCCMMLVKNPALFDVLVMPNLYGD 2
           LFL CCREVAEKYPEIKYEEV+IDNCCMMLVKNPALFDVLVMPNLYGD
Sbjct: 214 LFLKCCREVAEKYPEIKYEEVVIDNCCMMLVKNPALFDVLVMPNLYGD 261



 Score = 54.7 bits (130), Expect(2) = 3e-61
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -3

Query: 398 PCYSLSGYKTRYDDVNLVTIRENTEG 321
           PCYSL GYKTRYDDV+L+TIRENTEG
Sbjct: 130 PCYSLPGYKTRYDDVDLITIRENTEG 155


>gb|AAO61642.1| NAD-dependent isocitrate dehydrogenase alpha subunit [Brassica
           napus] gi|28974494|gb|AAO61643.1| NAD-dependent
           isocitrate dehydrogenase alpha subunit [Brassica napus]
           gi|28974496|gb|AAO61644.1| NAD-dependent isocitrate
           dehydrogenase alpha subunit [Brassica napus]
          Length = 330

 Score =  203 bits (517), Expect(2) = 4e-61
 Identities = 98/108 (90%), Positives = 103/108 (95%)
 Frame = -1

Query: 325 KGEYSGLEHQVVRGVVESLKIITSFASQRVAEYAFHYARTHGREKVSAIHKANIMRKTDG 146
           +GEYSGLEHQVVRGVVESLKIIT  AS RVAEYAFHYA+THGRE+VSAIHKANIM+KTDG
Sbjct: 118 EGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDG 177

Query: 145 LFLTCCREVAEKYPEIKYEEVIIDNCCMMLVKNPALFDVLVMPNLYGD 2
           LFL CCREVAEKYPEI YEEV+IDNCCMMLVKNPALFDVLVMPNLYGD
Sbjct: 178 LFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPALFDVLVMPNLYGD 225



 Score = 56.6 bits (135), Expect(2) = 4e-61
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 398 PCYSLSGYKTRYDDVNLVTIRENTEG 321
           PCYSL GYKTRYDDVNL+TIRENTEG
Sbjct: 94  PCYSLPGYKTRYDDVNLITIRENTEG 119


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