BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022524
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223...   151   5e-35
gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]                       145   3e-33
ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   145   4e-33
ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         134   1e-29
ref|XP_004135474.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]     133   2e-29

>ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223529002|gb|EEF30993.1|
           cyclin d, putative [Ricinus communis]
          Length = 386

 Score =  151 bits (382), Expect = 5e-35
 Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 3/136 (2%)
 Frame = +1

Query: 109 RGNEDS-SPIMSLSCSDCFSDLICSEDARTL--SEESLEDFQDFEFPDGIEESIAEFVEG 279
           + NE S + IMSLSCSDCF+DL+CSED+  +  + +S E   D E P G  ESIA F+E 
Sbjct: 30  KSNEKSPAAIMSLSCSDCFNDLLCSEDSSEIFSTGDSPEYSSDLESPAGTVESIASFIED 89

Query: 280 EGTHEPLEFDYMARFQSQSLDVSARKDSVSWIIKVQAFFCFQPLTAYLAVNYMDRFLAFR 459
           E    P  FDY++RFQS+SLD SAR+DSV+WI+KVQ ++ FQPLTAYL+VNY+DRFL  R
Sbjct: 90  ERNFVP-GFDYLSRFQSRSLDASAREDSVAWILKVQTYYRFQPLTAYLSVNYLDRFLYSR 148

Query: 460 GLPQANGSWPLQLLSV 507
            LPQ+ G WP+QLLSV
Sbjct: 149 SLPQSKG-WPMQLLSV 163


>gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]
          Length = 315

 Score =  145 bits (366), Expect = 3e-33
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = +1

Query: 136 MSLSCSDCFSDLICSEDARTLS-EESLEDFQDFEFPDGIEESIAEFVEGEGTHEPLEFDY 312
           MS+SCSDCFSDL+C ED+  LS ++  E   DFE+    ++SIAEF+E E    P   DY
Sbjct: 1   MSISCSDCFSDLLCCEDSGILSGDDRPECSYDFEYSGDFDDSIAEFIEQERKFVP-GIDY 59

Query: 313 MARFQSQSLDVSARKDSVSWIIKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPL 492
           + RFQSQ LD SAR++SV+WI+KVQ F+ FQPLTAYL+VNY+DRF+  RG P ANG WPL
Sbjct: 60  VERFQSQVLDASAREESVAWILKVQRFYGFQPLTAYLSVNYLDRFIYCRGFPVANG-WPL 118

Query: 493 QLLSV 507
           QLLSV
Sbjct: 119 QLLSV 123


>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera]
           gi|296086502|emb|CBI32091.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  145 bits (365), Expect = 4e-33
 Identities = 79/124 (63%), Positives = 92/124 (74%)
 Frame = +1

Query: 136 MSLSCSDCFSDLICSEDARTLSEESLEDFQDFEFPDGIEESIAEFVEGEGTHEPLEFDYM 315
           MSLS SD FSDL+C ED+  LS +  E   D E P  IEESIA F+E E    P  FDY+
Sbjct: 1   MSLSYSDRFSDLLCGEDSSILSGDLPECSSDLESPTDIEESIAGFIEDERNFVP-GFDYL 59

Query: 316 ARFQSQSLDVSARKDSVSWIIKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPLQ 495
           ARF+S SLD SAR++SV+WI+KVQA+  FQPLTAYL+VNY+DRFL  R LPQ NG WPLQ
Sbjct: 60  ARFRSHSLDASAREESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSRRLPQTNG-WPLQ 118

Query: 496 LLSV 507
           LLSV
Sbjct: 119 LLSV 122


>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  134 bits (336), Expect = 1e-29
 Identities = 74/132 (56%), Positives = 93/132 (70%), Gaps = 8/132 (6%)
 Frame = +1

Query: 136 MSLSCSDCFSD-----LICSEDARTLSEESLEDFQDFEFPDGIE---ESIAEFVEGEGTH 291
           MS+SCS+CF D     L+C ED+  + + S E   D + P   E   ESIA F+E E   
Sbjct: 1   MSVSCSNCFPDDDDSFLLCGEDSSGIIDSSPECSSDLDSPPPSEAEAESIAGFIEDERNF 60

Query: 292 EPLEFDYMARFQSQSLDVSARKDSVSWIIKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQ 471
            P  F+Y+ RFQS+SLD SAR++SV+WI+KVQA++ FQPLTAYL+VNY+DRFL  R LPQ
Sbjct: 61  VP-GFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSRQLPQ 119

Query: 472 ANGSWPLQLLSV 507
            NG WPLQLLSV
Sbjct: 120 TNG-WPLQLLSV 130


>ref|XP_004135474.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
          Length = 335

 Score =  133 bits (334), Expect = 2e-29
 Identities = 71/125 (56%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +1

Query: 136 MSLSCSDCFSDLICSEDAR-TLSEESLEDFQDFEFPDGIEESIAEFVEGEGTHEPLEFDY 312
           MS+S S+CFS+L+C ED+    S ES     D E P  +EESI+ F++ E    P ++D 
Sbjct: 1   MSVSISNCFSNLLCQEDSSGVFSGESPGCSSDLESPACVEESISVFIKNERHFVP-DYDC 59

Query: 313 MARFQSQSLDVSARKDSVSWIIKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPL 492
            +RFQS SLD +AR DS++WI+KVQA++ FQPLTAYL+VNY+DRFL  R LPQ+NG WPL
Sbjct: 60  FSRFQSPSLDAAARLDSIAWILKVQAYYGFQPLTAYLSVNYLDRFLCSRRLPQSNG-WPL 118

Query: 493 QLLSV 507
           QLLSV
Sbjct: 119 QLLSV 123