BLASTX nr result

ID: Coptis21_contig00022521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022521
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275427.2| PREDICTED: uncharacterized protein LOC100242...   225   3e-56
emb|CBI15420.3| unnamed protein product [Vitis vinifera]              225   3e-56
ref|XP_004137291.1| PREDICTED: uncharacterized protein LOC101206...   221   4e-55
ref|XP_002516741.1| ubiquitin-protein ligase, putative [Ricinus ...   213   9e-53
ref|XP_002309643.1| predicted protein [Populus trichocarpa] gi|2...   211   3e-52

>ref|XP_002275427.2| PREDICTED: uncharacterized protein LOC100242396 [Vitis vinifera]
          Length = 653

 Score =  225 bits (573), Expect = 3e-56
 Identities = 152/401 (37%), Positives = 202/401 (50%), Gaps = 9/401 (2%)
 Frame = +2

Query: 209  PTSKRNSCPGVRIRGGRIFDSQNGKTCHQCRQKTMDFVAVCKRQIDEKRCCSIKFCHKCL 388
            P  +R   PGVRI GGRI+DSQNGKTCHQCRQKTMDF+A CK Q  EK+ CS +FCHKCL
Sbjct: 21   PKKQRTKSPGVRIIGGRIYDSQNGKTCHQCRQKTMDFMAPCKNQ-GEKKQCSFRFCHKCL 79

Query: 389  LNRYGEKAEEAERLENWKCPKCRGICNCSFCMKKKGHQPTGILVHTAKATGFQSVLDMLV 568
            LNRYGEKAEEA  L+ WKCPKCRGICNCSFCMKK+GH+PTGILVHTAKATGF SV +ML 
Sbjct: 80   LNRYGEKAEEAVALDEWKCPKCRGICNCSFCMKKRGHRPTGILVHTAKATGFSSVSEMLQ 139

Query: 569  VTGPDNFNGSRRKEKVAEGEESLSSPRDVXXXXXXXXXQFEESNTDGNVDKGKKRSKKDN 748
              G +N +GS R     EG    +S  ++           E++ +DG  D          
Sbjct: 140  FKGSEN-SGSERSVP-DEGTSLTASSEELVVALSGSR---EKNGSDGRDDS--------- 185

Query: 749  VRCEIDLNITLNEEEMKSERSDGGETMRMIKCRKFKRLARANRDVNEQDNGAYSEKNREG 928
                         + M  + +   +  R  K +  ++ A  +   +  D+GA + K+   
Sbjct: 186  -----------RVQSMPLQMNGSAKETRNSKSKSIRKKADNSMCEHNGDDGASTGKS--- 231

Query: 929  LCESIETSLNSIYEGEKMNETAGVDKKPQICSNICLDLIKALHKIAHSKDSRNC-ISEVN 1105
                                     KKP+I   +     K   ++  +K + +    +  
Sbjct: 232  -----------------------CPKKPRISKEVSKKEGKIHKRVQFNKSNADMRFPDKT 268

Query: 1106 STELIKKEEE----PDETDMSFHACDKNSGIDNLGGKTMLITNYRHKNEPDAGTSLRQNM 1273
            S E I+ E+     P   ++  H         + G K    T      +      L Q  
Sbjct: 269  SAESIEIEDNEATAPSYANIDGHKTKHKPVKKSYGCKRN--TLEVQGKDSHVEILLPQGT 326

Query: 1274 NLTTIADIELPAEDV---LQFLEFCNAFGQEL-LSKEIPDV 1384
             L+++A I++ AEDV   LQFLEFC AFGQ L L K  P++
Sbjct: 327  QLSSVASIDMLAEDVGHALQFLEFCEAFGQVLDLKKGQPEL 367


>emb|CBI15420.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  225 bits (573), Expect = 3e-56
 Identities = 152/401 (37%), Positives = 202/401 (50%), Gaps = 9/401 (2%)
 Frame = +2

Query: 209  PTSKRNSCPGVRIRGGRIFDSQNGKTCHQCRQKTMDFVAVCKRQIDEKRCCSIKFCHKCL 388
            P  +R   PGVRI GGRI+DSQNGKTCHQCRQKTMDF+A CK Q  EK+ CS +FCHKCL
Sbjct: 21   PKKQRTKSPGVRIIGGRIYDSQNGKTCHQCRQKTMDFMAPCKNQ-GEKKQCSFRFCHKCL 79

Query: 389  LNRYGEKAEEAERLENWKCPKCRGICNCSFCMKKKGHQPTGILVHTAKATGFQSVLDMLV 568
            LNRYGEKAEEA  L+ WKCPKCRGICNCSFCMKK+GH+PTGILVHTAKATGF SV +ML 
Sbjct: 80   LNRYGEKAEEAVALDEWKCPKCRGICNCSFCMKKRGHRPTGILVHTAKATGFSSVSEMLQ 139

Query: 569  VTGPDNFNGSRRKEKVAEGEESLSSPRDVXXXXXXXXXQFEESNTDGNVDKGKKRSKKDN 748
              G +N +GS R     EG    +S  ++           E++ +DG  D          
Sbjct: 140  FKGSEN-SGSERSVP-DEGTSLTASSEELVVALSGSR---EKNGSDGRDDS--------- 185

Query: 749  VRCEIDLNITLNEEEMKSERSDGGETMRMIKCRKFKRLARANRDVNEQDNGAYSEKNREG 928
                         + M  + +   +  R  K +  ++ A  +   +  D+GA + K+   
Sbjct: 186  -----------RVQSMPLQMNGSAKETRNSKSKSIRKKADNSMCEHNGDDGASTGKS--- 231

Query: 929  LCESIETSLNSIYEGEKMNETAGVDKKPQICSNICLDLIKALHKIAHSKDSRNC-ISEVN 1105
                                     KKP+I   +     K   ++  +K + +    +  
Sbjct: 232  -----------------------CPKKPRISKEVSKKEGKIHKRVQFNKSNADMRFPDKT 268

Query: 1106 STELIKKEEE----PDETDMSFHACDKNSGIDNLGGKTMLITNYRHKNEPDAGTSLRQNM 1273
            S E I+ E+     P   ++  H         + G K    T      +      L Q  
Sbjct: 269  SAESIEIEDNEATAPSYANIDGHKTKHKPVKKSYGCKRN--TLEVQGKDSHVEILLPQGT 326

Query: 1274 NLTTIADIELPAEDV---LQFLEFCNAFGQEL-LSKEIPDV 1384
             L+++A I++ AEDV   LQFLEFC AFGQ L L K  P++
Sbjct: 327  QLSSVASIDMLAEDVGHALQFLEFCEAFGQVLDLKKGQPEL 367


>ref|XP_004137291.1| PREDICTED: uncharacterized protein LOC101206502 [Cucumis sativus]
          Length = 637

 Score =  221 bits (563), Expect = 4e-55
 Identities = 146/414 (35%), Positives = 214/414 (51%), Gaps = 28/414 (6%)
 Frame = +2

Query: 215  SKRNSCPGVRIRGGRIFDSQNGKTCHQCRQKTMDFVAVCKRQIDEKRCCSIKFCHKCLLN 394
            +KR   PGVR+ GGRI+DS+NGKTCHQCRQKTMDF A C    ++K  C+IKFCHKCLLN
Sbjct: 16   AKRTKSPGVRVVGGRIYDSENGKTCHQCRQKTMDFAASCMNMKEDK-LCTIKFCHKCLLN 74

Query: 395  RYGEKAEEAERLENWKCPKCRGICNCSFCMKKKGHQPTGILVHTAKATGFQSVLDMLVVT 574
            RYGEKAEEA  +++W CPKCRG+CNCS CMKKKG +PTG+LV  AKATGF SV +ML+V 
Sbjct: 75   RYGEKAEEAMLMKDWSCPKCRGLCNCSVCMKKKGLKPTGLLVRAAKATGFSSVSEMLLVH 134

Query: 575  GPDNFNGSRRKEKVAEGEESLSSPRDVXXXXXXXXXQFEESNTDGNVDKGKK-------- 730
            G D  +  + K  +++         D          Q +E++ +GN +            
Sbjct: 135  GSDCLD--QYKNTISKAASPKKQASDDKSVMITPRKQGKENSLNGNNESNLNLQKQTPNF 192

Query: 731  -RSKKDNVRCEIDLNITLNEEEMKSERSDGGETMRMIKCRKFKRLARANRDVNEQDNGAY 907
             R K   ++ E +L    NE ++ ++ S    T +         +++   + N +++   
Sbjct: 193  DRKKLKEMKRE-ELKEICNENKVDAKFSKKSSTTK----SSLGEISKEQTEANGRNDSLP 247

Query: 908  SEKN--REGLCESIETSLNSIYEGEKMNETAGVDKKPQICSNICLDLIKALHKIAHSKDS 1081
            S+K   R+G  +   + +++  +  + N +   + K                 +A  +D 
Sbjct: 248  SKKKGPRKGTSKDAASDVSTPKDAREKNSSGHENAKAS--------------DVAEEEDK 293

Query: 1082 RNCISEVNSTELIKKEEEPDETDMSFHACDKNSGIDNLGGKTML--------------IT 1219
            R+  S+     LIK  +E +E ++  H    N+  D    KT +                
Sbjct: 294  RS--SKDVPYHLIKAGDEKEEKELHIHKY-ANTSKDVKNNKTKVHDKPPAKSQENKKCSV 350

Query: 1220 NYRHKNEPDAGTSLRQNMNLTTIADIELPAEDV---LQFLEFCNAFGQELLSKE 1372
            N ++K E  A       + LTT+ADIEL  +DV   LQFLEFC AFG+ L  K+
Sbjct: 351  NIQNK-EFGASVPFSPGLRLTTVADIELTTDDVGHALQFLEFCAAFGKALNIKK 403


>ref|XP_002516741.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223544114|gb|EEF45639.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 687

 Score =  213 bits (543), Expect = 9e-53
 Identities = 149/409 (36%), Positives = 201/409 (49%), Gaps = 29/409 (7%)
 Frame = +2

Query: 221  RNSCPGVRIRGGRIFDSQNGKTCHQCRQKTMDFVAVCKRQIDEKRCCSIKFCHKCLLNRY 400
            R+ CPGVR+  GRI+DS NGKTCHQCRQKT DF A CK     K+C +IK+CHKCL+NRY
Sbjct: 30   RSKCPGVRVIHGRIYDSDNGKTCHQCRQKTRDFAAECKILKGNKQC-TIKYCHKCLMNRY 88

Query: 401  GEKAEEAERLENWKCPKCRGICNCSFCMKKKGHQPTGILVHTAKATGFQSVLDMLVVTGP 580
            GEKAEE   L+NW CPKCRGICNCSFCMKK+GH+PTGILVHTAK  GF SV ++L + GP
Sbjct: 89   GEKAEEVALLDNWTCPKCRGICNCSFCMKKRGHKPTGILVHTAKENGFSSVSELLQIKGP 148

Query: 581  DNF-------NGSRRKEKVAEGEES-LSSPRDVXXXXXXXXXQFEESNTDGNVDKGKKRS 736
            +NF       N      K A  +ES ++SPR +             S     V   KK  
Sbjct: 149  ENFACDRFPNNTGASLNKPASAKESIIASPRKLGKENSLDGKCDSHSPKSSPVSNKKKHK 208

Query: 737  K------------KDNVRCEIDLNITLNEEEMKSERSDGGETMRMIKCR-KFKRLARANR 877
            K            +D+ R +      +   +MK    D    ++  K + +FK + +   
Sbjct: 209  KAKSEGLHDVNSLRDSSRKKPRFTEEVLTNKMKINGKDEDSLVKTCKSKIEFKDIPKKEV 268

Query: 878  DVNEQDNGAYSEKNREGLCESIETSLNSIYEGEKMN---ETAGVDKKPQICSN-ICLDLI 1045
              N++  G  +      + +  +     + + E +N   E+   + +PQI  N +CL   
Sbjct: 269  KKNDKVEGVIA------VGKKFKKQSQDVSKKEVINVKAESENENFQPQISRNVVCL--- 319

Query: 1046 KALHKIAHSK-DSRNCISEVNSTELIKKEEEPDETDMSFHACDKNSGIDNLGGKTMLITN 1222
                 IA+ K D+ NC S +     +K              C+ + G   L  K      
Sbjct: 320  -----IANEKRDTGNCKS-IGVPGGVK--------------CNVDKGTIELQSK------ 353

Query: 1223 YRHKNEPDAGTSLRQNMNLTTIADIELPAED---VLQFLEFCNAFGQEL 1360
                 + +    L     LT +A IELP ED    LQF EFC AF + L
Sbjct: 354  -----QTEDDIQLPSGTCLTNVAGIELPHEDAGHALQFFEFCAAFAEVL 397


>ref|XP_002309643.1| predicted protein [Populus trichocarpa] gi|222855619|gb|EEE93166.1|
            predicted protein [Populus trichocarpa]
          Length = 570

 Score =  211 bits (538), Expect = 3e-52
 Identities = 138/380 (36%), Positives = 189/380 (49%), Gaps = 3/380 (0%)
 Frame = +2

Query: 230  CPGVRIRGGRIFDSQNGKTCHQCRQKTMDFVAVCKRQIDEKRCCSIKFCHKCLLNRYGEK 409
            CPGVR+ GGRI+DSQNGKTCHQCRQKTMDF+A C  Q   K  C++KFCHKCLLNRYGEK
Sbjct: 23   CPGVRVVGGRIYDSQNGKTCHQCRQKTMDFIAACTAQKGNK-LCTLKFCHKCLLNRYGEK 81

Query: 410  AEEAERLENWKCPKCRGICNCSFCMKKKGHQPTGILVHTAKATGFQSVLDMLVVTGPDNF 589
            AEE   L++W+CPKCRGICNCSFCMK++GH+PTGILV TAK  GF SV ++L V GP+N 
Sbjct: 82   AEEVALLDDWQCPKCRGICNCSFCMKRRGHKPTGILVRTAKENGFSSVSELLQVKGPENL 141

Query: 590  NGSRRKEKVAEGEESLSSPRDVXXXXXXXXXQFEESNTDGNVDKGKKRSKKDNVRCEIDL 769
            +  +      + +++  SP+ +         + +ES        G+K+SKK+  +     
Sbjct: 142  SHYK------DVKDNNVSPKKISDGNMDAETRLKES--------GQKKSKKERTK----- 182

Query: 770  NITLNEEEMKSERSDGGETMRMIKCRKFKRLARANRDVNEQDNGAYSEKNREGLCESIET 949
                       E S+GG         +     R   +V+E      ++ N +  C+ ++ 
Sbjct: 183  -----------EVSNGGRN------GEASSKVRITAEVSENK----AKTNEKDKCDVVKD 221

Query: 950  SLNSIYEGEKMNETAGVDKKPQICSNICLDLIKALHKIAHSKDSRNCISEVNSTELIKKE 1129
                       NE A V+K                      K S+  + E +  E++  +
Sbjct: 222  K----------NEDAFVEK----------------------KRSKTQLQEFSKNEVLLAK 249

Query: 1130 EEPDETDMSFHACDKNSGIDNLGGKTMLITNYRHKNEPDAGTSLRQNMNLTTIADIELPA 1309
            E                          L T  ++K E D    L Q   L  +A  ELP 
Sbjct: 250  ER------------------------RLTTEIQNK-EIDVDIKLPQGTCLMAVAGFELPP 284

Query: 1310 EDV---LQFLEFCNAFGQEL 1360
            +DV   LQFLEFC +FG+ L
Sbjct: 285  DDVGNALQFLEFCASFGKVL 304