BLASTX nr result

ID: Coptis21_contig00022513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022513
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_085566.1| hypothetical protein ArthMp044 [Arabidopsis tha...    59   4e-07
ref|YP_002608374.1| orf102 [Vitis vinifera] gi|209954171|emb|CAQ...    55   8e-06

>ref|NP_085566.1| hypothetical protein ArthMp044 [Arabidopsis thaliana]
           gi|45477063|sp|P92544.1|M1130_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg01130;
           AltName: Full=ORF106f gi|1785767|emb|CAA69797.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 106

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +2

Query: 98  MIVTALQILFTLIRYVTETKFFRSVSVLFSDSEDEPAD 211
           M+VTALQILF+LIRYVTET   RSVSVLFSDSEDEP D
Sbjct: 1   MMVTALQILFSLIRYVTET--IRSVSVLFSDSEDEPDD 36


>ref|YP_002608374.1| orf102 [Vitis vinifera] gi|209954171|emb|CAQ77618.1| orf102 [Vitis
           vinifera] gi|239764768|gb|ACS15237.1| ORF102 [Vitis
           vinifera]
          Length = 101

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = +3

Query: 141 MSLKQSSSVLSLFYFRIPRMSRPILTSFMRSRTTE 245
           MSLKQS  VLSL YFRIPRMSRPILTSFMRS TT+
Sbjct: 1   MSLKQS--VLSLLYFRIPRMSRPILTSFMRSWTTK 33