BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022457
         (1414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containi...   424   e-116
emb|CBI31859.3| unnamed protein product [Vitis vinifera]              424   e-116
ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containi...   399   e-109
ref|XP_003623891.1| Pentatricopeptide repeat-containing protein ...   397   e-108
ref|XP_002510857.1| pentatricopeptide repeat-containing protein,...   390   e-106

>ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
            mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  424 bits (1091), Expect = e-116
 Identities = 201/297 (67%), Positives = 249/297 (83%)
 Frame = +2

Query: 2    LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
            L +AR LFD MP +DVISWTSMITGYS +++FSDA+ LF+EMM AKVK D++TV++VLSA
Sbjct: 299  LTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSA 358

Query: 182  CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSW 361
            CAHLG LD G AVH+YI  H ++AD++VGN+LIDMY KCG ++KAL VF  M +KD VSW
Sbjct: 359  CAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSW 418

Query: 362  TSIITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTHAGLVDEGLQYFESMKK 541
            TS+I+GLAVNG+A  AL  FS ML+EGVQP   TFVG+L+AC HAGLV++GL+YFESM+ 
Sbjct: 419  TSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMES 478

Query: 542  VHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHGNVILAE 721
            VH + P MKHYGC+VDLLSRSG +D+AYEFI  +PI PD +VWRILLSACK+HGNV+LAE
Sbjct: 479  VHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAE 538

Query: 722  ISLKKLLELEPSDSSNYVLLSNTYAGADRWDEVVTMRKLMKESYVQKAAGCSSIEVN 892
            I+ K+LLEL+P DS NYVLLSNTYAG DRWD+ + MR+LM++S VQK +G SSIEV+
Sbjct: 539  IATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEVD 595



 Score =  132 bits (332), Expect = 2e-28
 Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 31/265 (11%)
 Frame = +2

Query: 2   LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
           L  A+ +FD M  +D++SW ++I GYS  N++ + L LF  M  A +K D +T+  ++ A
Sbjct: 167 LGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILA 226

Query: 182 CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMY------------------------ 289
           C+HLG  +   ++  YI  ++++ D+++GN LIDMY                        
Sbjct: 227 CSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSW 286

Query: 290 -------FKCGCIKKALRVFEEMAEKDGVSWTSIITGLAVNGYAKEALRFFSHMLKEGVQ 448
                   K G +  A ++F+ M ++D +SWTS+ITG +      +A++ F  M+   V+
Sbjct: 287 NALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVK 346

Query: 449 PRDVTFVGVLVACTHAGLVDEGLQYFESMKKVHRIEPRMKHYGCIVDLLSRSGFLDRAYE 628
           P  VT   VL AC H G +D G      +++ H ++  +     ++D+  + G +++A E
Sbjct: 347 PDKVTVASVLSACAHLGKLDVGWAVHHYIRR-HGVQADIYVGNSLIDMYCKCGMVEKALE 405

Query: 629 FITSIPIAPDAIVWRILLSACKVHG 703
               +    D++ W  ++S   V+G
Sbjct: 406 VFHRMK-DKDSVSWTSVISGLAVNG 429



 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 4/290 (1%)
 Frame = +2

Query: 2   LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
           L  A  +F+++    ++ W  MI G S S+   +A+ ++  M    +  + +T+  +  A
Sbjct: 66  LHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKA 125

Query: 182 CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSW 361
           CA +  + +G+ +H +      ++ L V NALI MY  CG +  A ++F+ M ++D VSW
Sbjct: 126 CARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSW 185

Query: 362 TSIITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTHAG---LVDEGLQYFES 532
            ++I G +     KE LR F  M    ++   VT V +++AC+H G     D  ++Y   
Sbjct: 186 NTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYI-- 243

Query: 533 MKKVHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHGNVI 712
             K + +E  +     ++D+  R    + A      +    + + W  L+      GN+ 
Sbjct: 244 --KENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMR-ERNIVSWNALVMGHAKVGNLT 300

Query: 713 LAEISLKKLLELEPS-DSSNYVLLSNTYAGADRWDEVVTMRKLMKESYVQ 859
            A    +KL +  P  D  ++  +   Y+ A ++ + V + + M  + V+
Sbjct: 301 AA----RKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVK 346


>emb|CBI31859.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  424 bits (1091), Expect = e-116
 Identities = 201/297 (67%), Positives = 249/297 (83%)
 Frame = +2

Query: 2    LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
            L +AR LFD MP +DVISWTSMITGYS +++FSDA+ LF+EMM AKVK D++TV++VLSA
Sbjct: 176  LTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSA 235

Query: 182  CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSW 361
            CAHLG LD G AVH+YI  H ++AD++VGN+LIDMY KCG ++KAL VF  M +KD VSW
Sbjct: 236  CAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSW 295

Query: 362  TSIITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTHAGLVDEGLQYFESMKK 541
            TS+I+GLAVNG+A  AL  FS ML+EGVQP   TFVG+L+AC HAGLV++GL+YFESM+ 
Sbjct: 296  TSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMES 355

Query: 542  VHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHGNVILAE 721
            VH + P MKHYGC+VDLLSRSG +D+AYEFI  +PI PD +VWRILLSACK+HGNV+LAE
Sbjct: 356  VHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAE 415

Query: 722  ISLKKLLELEPSDSSNYVLLSNTYAGADRWDEVVTMRKLMKESYVQKAAGCSSIEVN 892
            I+ K+LLEL+P DS NYVLLSNTYAG DRWD+ + MR+LM++S VQK +G SSIEV+
Sbjct: 416  IATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEVD 472



 Score =  147 bits (370), Expect = 9e-33
 Identities = 73/234 (31%), Positives = 134/234 (57%)
 Frame = +2

Query: 2   LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
           L  A+ +FD M  +D++SW ++I GYS  N++ + L LF  M  A +K D +T+  ++ A
Sbjct: 75  LGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILA 134

Query: 182 CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSW 361
           C+HLG  +   ++  YI  ++++ D+++GN LIDMY + G +  A ++F+ M ++D +SW
Sbjct: 135 CSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISW 194

Query: 362 TSIITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTHAGLVDEGLQYFESMKK 541
           TS+ITG +      +A++ F  M+   V+P  VT   VL AC H G +D G      +++
Sbjct: 195 TSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR 254

Query: 542 VHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHG 703
            H ++  +     ++D+  + G +++A E    +    D++ W  ++S   V+G
Sbjct: 255 -HGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMK-DKDSVSWTSVISGLAVNG 306



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
 Frame = +2

Query: 155 ITVSNVLSACAHLGALDTG---KAVHNYIHAHSIKAD----LHVGNALIDMYFKCGCIKK 313
           + +S+ ++  A + AL T      + + IH H++K      L V NALI MY  CG +  
Sbjct: 18  VALSSTIAPAALVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGF 77

Query: 314 ALRVFEEMAEKDGVSWTSIITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTH 493
           A ++F+ M ++D VSW ++I G +     KE LR F  M    ++   VT V +++AC+H
Sbjct: 78  AQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSH 137

Query: 494 AG---LVDEGLQYFESMKKVHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAI 664
            G     D  ++Y     K + +E  +     ++D+  R G L  A +   ++P   D I
Sbjct: 138 LGDWEFADSMVKYI----KENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMP-KRDVI 192

Query: 665 VWRILLS 685
            W  +++
Sbjct: 193 SWTSMIT 199


>ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
            mitochondrial-like [Glycine max]
          Length = 566

 Score =  399 bits (1026), Expect = e-109
 Identities = 191/298 (64%), Positives = 246/298 (82%)
 Frame = +2

Query: 2    LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
            L +AR LFD M  +DVISWT+MIT YS + +F++AL LF+EMM +KVK DEITV++VLSA
Sbjct: 260  LVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSA 319

Query: 182  CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSW 361
            CAH G+LD G+A H+YI  + +KAD++VGNALIDMY KCG ++KAL VF+EM +KD VSW
Sbjct: 320  CAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSW 379

Query: 362  TSIITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTHAGLVDEGLQYFESMKK 541
            TSII+GLAVNG+A  AL +FS ML+E VQP    FVG+L+AC HAGLVD+GL+YFESM+K
Sbjct: 380  TSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEK 439

Query: 542  VHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHGNVILAE 721
            V+ ++P MKHYGC+VDLLSRSG L RA+EFI  +P+ PD ++WRILLSA +VHGN+ LAE
Sbjct: 440  VYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAE 499

Query: 722  ISLKKLLELEPSDSSNYVLLSNTYAGADRWDEVVTMRKLMKESYVQKAAGCSSIEVNV 895
            I+ KKLLEL+PS+S NYVL SNTYAG++RW++ V MR+LM++S VQK +G S IE+ +
Sbjct: 500  IATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCIEMEL 557



 Score =  138 bits (347), Expect = 4e-30
 Identities = 86/300 (28%), Positives = 152/300 (50%), Gaps = 34/300 (11%)
 Frame = +2

Query: 2    LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
            L  A+ +FD MP +D++SW S++ GY    RF + L +F  M VA VK D +T+  V+ A
Sbjct: 128  LGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLA 187

Query: 182  CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEE--------- 334
            C  LG      A+ +YI  ++++ D+++GN LIDMY + G +  A  VF++         
Sbjct: 188  CTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSW 247

Query: 335  ----------------------MAEKDGVSWTSIITGLAVNGYAKEALRFFSHMLKEGVQ 448
                                  M+++D +SWT++IT  +  G   EALR F  M++  V+
Sbjct: 248  NAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVK 307

Query: 449  PRDVTFVGVLVACTHAGLVDEGLQYFESMKKVHRIEPRMKHYGCIVDLLSRSGFLDRAYE 628
            P ++T   VL AC H G +D G    + ++K + ++  +     ++D+  + G +++A E
Sbjct: 308  PDEITVASVLSACAHTGSLDVGEAAHDYIQK-YDVKADIYVGNALIDMYCKCGVVEKALE 366

Query: 629  FITSIPIAPDAIVWRILLSACKVHGNVILAEISLKKLLE--LEPSDSSNY-VLLSNTYAG 799
                +    D++ W  ++S   V+G    A     ++L   ++PS  +   +LL+  +AG
Sbjct: 367  VFKEMR-KKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAG 425



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 75/287 (26%), Positives = 138/287 (48%), Gaps = 4/287 (1%)
 Frame = +2

Query: 11  ARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSACAH 190
           A  LF ++    +  W  MI G+S S++ ++A+ ++  M    +  + +T   +  ACA 
Sbjct: 30  AHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACAR 89

Query: 191 LGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSWTSI 370
           +  +  G  +H  +     ++ L+V NALI+MY  CG +  A +VF+EM E+D VSW S+
Sbjct: 90  VPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSL 149

Query: 371 ITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTHA---GLVDEGLQYFESMKK 541
           + G       +E L  F  M   GV+   VT V V++ACT     G+ D  + Y E    
Sbjct: 150 VCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEE--- 206

Query: 542 VHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHGNVILAE 721
            + +E  +     ++D+  R G +  A      +    + + W  ++      GN++ A 
Sbjct: 207 -NNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWR-NLVSWNAMIMGYGKAGNLVAA- 263

Query: 722 ISLKKLLE-LEPSDSSNYVLLSNTYAGADRWDEVVTMRKLMKESYVQ 859
              ++L + +   D  ++  +  +Y+ A ++ E + + K M ES V+
Sbjct: 264 ---RELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVK 307


>ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498906|gb|AES80109.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1288

 Score =  397 bits (1021), Expect = e-108
 Identities = 191/297 (64%), Positives = 241/297 (81%)
 Frame = +2

Query: 2    LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
            L +AR LFD MP +DVISWTSMI+ YS + +F  A+ LF+EMMV KVK DEITV++VLSA
Sbjct: 978  LVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSA 1037

Query: 182  CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSW 361
            CAH+GALD G+AVH YI  + + AD++VGNALIDMY KCG ++K L VFEEM ++D VSW
Sbjct: 1038 CAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSW 1097

Query: 362  TSIITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTHAGLVDEGLQYFESMKK 541
            TS+I GLAVNG A  AL  FS ML+EGV+P   TFVGVL+AC HAG+VD+GL+YFESM++
Sbjct: 1098 TSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMER 1157

Query: 542  VHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHGNVILAE 721
            V+ + P MKHYGC+VDLLSRSG L RAYEFI  +P+ PD +VWRILLSA +VHGN+ LAE
Sbjct: 1158 VYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAE 1217

Query: 722  ISLKKLLELEPSDSSNYVLLSNTYAGADRWDEVVTMRKLMKESYVQKAAGCSSIEVN 892
            I+ KKLLE +PS+S NY+L SNTYAG++RW++V+ MR+LM+ES V K +  SS+E+N
Sbjct: 1218 IATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIN 1274



 Score =  128 bits (321), Expect = 4e-27
 Identities = 75/266 (28%), Positives = 131/266 (49%), Gaps = 31/266 (11%)
 Frame = +2

Query: 2    LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
            L  AR +FD M  +D++SW S+I GY    R+S+ L +F EM +A VK D +T+  V+ A
Sbjct: 846  LGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLA 905

Query: 182  CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDM------------------------- 286
            C  LG      A+  YI  + ++ D+++GN LIDM                         
Sbjct: 906  CTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSW 965

Query: 287  ------YFKCGCIKKALRVFEEMAEKDGVSWTSIITGLAVNGYAKEALRFFSHMLKEGVQ 448
                  Y K G +  A ++F++M  +D +SWTS+I+  +  G   +A+R F  M+   V+
Sbjct: 966  NAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVK 1025

Query: 449  PRDVTFVGVLVACTHAGLVDEGLQYFESMKKVHRIEPRMKHYGCIVDLLSRSGFLDRAYE 628
            P ++T   VL AC H G +D G    E ++K + +   +     ++D+  + G +++   
Sbjct: 1026 PDEITVASVLSACAHIGALDVGEAVHEYIRK-YDVNADIYVGNALIDMYCKCGAVEKGLS 1084

Query: 629  FITSIPIAPDAIVWRILLSACKVHGN 706
                +    D++ W  +++   V+G+
Sbjct: 1085 VFEEMG-KRDSVSWTSVIAGLAVNGS 1109



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 4/288 (1%)
 Frame = +2

Query: 11   ARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSACAH 190
            A  LF ++P   +  W  MI G+S +N+  +A+  +  M    +  + +T   +L ACA 
Sbjct: 749  ANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACAR 808

Query: 191  LGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSWTSI 370
            +  +     VH  +      +DL V NALI  Y     +  A +VF+EM+E+D VSW S+
Sbjct: 809  ISNVSC-TTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSL 867

Query: 371  ITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACT---HAGLVDEGLQYFESMKK 541
            I G        E L  F  M    V+   VT V V++ACT     G+VD  ++Y E    
Sbjct: 868  ICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEE--- 924

Query: 542  VHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHGNVILAE 721
             +++E  +     ++D+  R   +D A      +    + + W  ++      GN++ A 
Sbjct: 925  -NKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMR-DRNMVSWNAMIMGYGKAGNLVAA- 981

Query: 722  ISLKKLLELEP-SDSSNYVLLSNTYAGADRWDEVVTMRKLMKESYVQK 862
               +KL +  P  D  ++  + ++Y+ A ++ + V   +L +E  V K
Sbjct: 982  ---RKLFDDMPHRDVISWTSMISSYSQAGQFGKAV---RLFQEMMVTK 1023


>ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223549972|gb|EEF51459.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 641

 Score =  390 bits (1003), Expect = e-106
 Identities = 187/296 (63%), Positives = 236/296 (79%)
 Frame = +2

Query: 2    LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
            L +A+ LF+ MP+++VISWT MI+G + +N+ SDAL LF+EMM A VK DEITVS+VLSA
Sbjct: 340  LVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSA 399

Query: 182  CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSW 361
            C+HLG LDTG+ VH Y+  H IK+D++VGNALIDMY KCG + KAL VF +M +KD VSW
Sbjct: 400  CSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSW 459

Query: 362  TSIITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTHAGLVDEGLQYFESMKK 541
            TS+I GLAVNG+       FS ML++G+QP   +F+G+L+ACTHAGLVD+GL+YFESM+ 
Sbjct: 460  TSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEH 519

Query: 542  VHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHGNVILAE 721
            V+ + P MKHYGC+VDLLSRSG LDRAYEFI  +P+ PD ++WRILLSACK+H N++LAE
Sbjct: 520  VYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAE 579

Query: 722  ISLKKLLELEPSDSSNYVLLSNTYAGADRWDEVVTMRKLMKESYVQKAAGCSSIEV 889
            I+  KLLEL+PS+S NYVLLSNTYAG+DRWD+   MR LM    VQK +  SSIEV
Sbjct: 580  IATSKLLELDPSNSGNYVLLSNTYAGSDRWDDASRMRDLMVVGDVQKPSSWSSIEV 635



 Score =  139 bits (351), Expect = 1e-30
 Identities = 92/300 (30%), Positives = 149/300 (49%), Gaps = 34/300 (11%)
 Frame = +2

Query: 2    LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKLDEITVSNVLSA 181
            L  A+ +FD+M  +D++SW S+I GYS  NRF + L LF  M  A V  D +T+  V+ A
Sbjct: 208  LGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILA 267

Query: 182  CAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVSW 361
            C++L       ++  YI    +  D+++GN+LIDMY + G +  A RVF+ M EK+ VSW
Sbjct: 268  CSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSW 327

Query: 362  TSIITGLAVNG-------------------------------YAKEALRFFSHMLKEGVQ 448
             +++TG A  G                                  +AL+ F  M+   V+
Sbjct: 328  NAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVK 387

Query: 449  PRDVTFVGVLVACTHAGLVDEGLQYFESMKKVHRIEPRMKHYGCIVDLLSRSGFLDRAYE 628
            P ++T   VL AC+H GL+D G    E M + H I+  +     ++D+  + G +D+A E
Sbjct: 388  PDEITVSSVLSACSHLGLLDTGQTVHEYMCR-HDIKSDVYVGNALIDMYCKCGVVDKALE 446

Query: 629  FITSIPIAPDAIVWRILLSACKVHGNVILAEISLKKLLE--LEPSDSSNY-VLLSNTYAG 799
                +    D++ W  ++    V+G V        ++L   L+P+  S   +LL+ T+AG
Sbjct: 447  VFHDMK-KKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAG 505



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 60/244 (24%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
 Frame = +2

Query: 2   LDSARALFDRMPVKDVISWTSMITGYSHSNRFSDALTLFREMMVAKVKL-DEITVSNVLS 178
           L+ A   F ++    ++ +  +I G S S   ++A+ ++ ++M  +  L D +T   +  
Sbjct: 106 LNKANFAFIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFK 165

Query: 179 ACAHLGALDTGKAVHNYIHAHSIKADLHVGNALIDMYFKCGCIKKALRVFEEMAEKDGVS 358
           AC+ +  +  G+  H  +      + L + N+LI MY   G +  A +VF++M ++D VS
Sbjct: 166 ACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVS 225

Query: 359 WTSIITGLAVNGYAKEALRFFSHMLKEGVQPRDVTFVGVLVACTHA---GLVDEGLQYFE 529
           W S+I G +     KE L  F+ M +  V    VT V V++AC++    G+VD  ++Y E
Sbjct: 226 WNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIE 285

Query: 530 SMKKVHRIEPRMKHYGCIVDLLSRSGFLDRAYEFITSIPIAPDAIVWRILLSACKVHGNV 709
                  ++  +     ++D+  R G +D A      +    + + W  +L+     G++
Sbjct: 286 D----KHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQ-EKNIVSWNAMLTGYATAGDL 340

Query: 710 ILAE 721
           + A+
Sbjct: 341 VAAK 344