BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022369
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat...    84   5e-23
ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|2...    84   8e-21
gb|ACU28453.1| At1g74580-like protein [Arabidopsis lyrata subsp....    85   4e-18
gb|ACU28436.1| At1g74580-like protein [Arabidopsis lyrata subsp....    85   4e-18
gb|ACU28433.1| At1g74580-like protein [Arabidopsis lyrata subsp....    85   4e-18

>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
           unnamed protein product [Vitis vinifera]
          Length = 764

 Score = 84.0 bits (206), Expect(2) = 5e-23
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = +2

Query: 2   FTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNAVAYCTVIGGFYED 139
           FTIR+KSFCRTSRPH A RLL NMPSQGC  +AVAYCTVIGGFYE+
Sbjct: 149 FTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEE 194



 Score = 48.5 bits (114), Expect(2) = 5e-23
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = +3

Query: 141 ENHQIPASDLFNEMLGEGICPDITTFNKLI 230
           ENH++ A +LF EMLG GICPDI  FNKLI
Sbjct: 194 ENHRVEAHELFEEMLGLGICPDIMAFNKLI 223


>ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|222865556|gb|EEF02687.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 84.0 bits (206), Expect(2) = 8e-21
 Identities = 38/46 (82%), Positives = 40/46 (86%)
 Frame = +2

Query: 2   FTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNAVAYCTVIGGFYED 139
           FTIRIKSFCRT RPH ALRLL NM SQGC LNAVAYCTV+ GFYE+
Sbjct: 149 FTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEE 194



 Score = 41.2 bits (95), Expect(2) = 8e-21
 Identities = 17/30 (56%), Positives = 25/30 (83%)
 Frame = +3

Query: 141 ENHQIPASDLFNEMLGEGICPDITTFNKLI 230
           EN+++ A +LFN+ML  GI PD++TFNKL+
Sbjct: 194 ENYRVEAYELFNDMLRIGIFPDVSTFNKLL 223


>gb|ACU28453.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
           gi|255685930|gb|ACU28454.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
          Length = 172

 Score = 84.7 bits (208), Expect(2) = 4e-18
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +2

Query: 2   FTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNAVAYCTVIGGFYED 139
           FTIR+KSFCRTSRPH ALRLL NM SQGC +N VAYCTV+GGFYE+
Sbjct: 76  FTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 121



 Score = 31.6 bits (70), Expect(2) = 4e-18
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +3

Query: 141 ENHQIPASDLFNEMLGEGICPDITTFNKLI 230
           EN ++ A +LF +ML  G+   ++TFNKL+
Sbjct: 121 ENFKVEAYELFGKMLASGVSLCLSTFNKLL 150


>gb|ACU28436.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
           gi|255685902|gb|ACU28440.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|255685904|gb|ACU28441.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|255685906|gb|ACU28442.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|255685908|gb|ACU28443.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|255685914|gb|ACU28446.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
          Length = 172

 Score = 84.7 bits (208), Expect(2) = 4e-18
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +2

Query: 2   FTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNAVAYCTVIGGFYED 139
           FTIR+KSFCRTSRPH ALRLL NM SQGC +N VAYCTV+GGFYE+
Sbjct: 76  FTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 121



 Score = 31.6 bits (70), Expect(2) = 4e-18
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +3

Query: 141 ENHQIPASDLFNEMLGEGICPDITTFNKLI 230
           EN ++ A +LF +ML  G+   ++TFNKL+
Sbjct: 121 ENFKVEAYELFGKMLASGVSLCLSTFNKLL 150


>gb|ACU28433.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
           gi|255685890|gb|ACU28434.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|255685892|gb|ACU28435.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
          Length = 172

 Score = 84.7 bits (208), Expect(2) = 4e-18
 Identities = 37/46 (80%), Positives = 41/46 (89%)
 Frame = +2

Query: 2   FTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNAVAYCTVIGGFYED 139
           FTIR+KSFCRTSRPH ALRLL NM SQGC +N VAYCTV+GGFYE+
Sbjct: 76  FTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 121



 Score = 31.6 bits (70), Expect(2) = 4e-18
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +3

Query: 141 ENHQIPASDLFNEMLGEGICPDITTFNKLI 230
           EN ++ A +LF +ML  G+   ++TFNKL+
Sbjct: 121 ENFKVEAYELFGKMLASGVSLCLSTFNKLL 150