BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022337
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090462.1| ribosomal protein S12 (mitochondrion) [Mille...   214   4e-54
ref|NP_064075.2| rps12 gene product (mitochondrion) [Beta vulgar...   214   8e-54
emb|CAA89889.1| ribosomal protein S12 [Magnolia x soulangeana]        213   2e-53
ref|YP_003587377.1| ribosomal protein S12 [Cucurbita pepo] gi|25...   213   2e-53
ref|YP_003587241.1| ribosomal protein S12 [Citrullus lanatus] gi...   213   2e-53

>ref|YP_005090462.1| ribosomal protein S12 (mitochondrion) [Millettia pinnata]
           gi|372450318|ref|YP_005090500.1| ribosomal protein S12
           (mitochondrion) [Lotus japonicus]
           gi|316996005|dbj|BAD83444.2| ribosomal protein S12
           (mitochondrion) [Nicotiana tabacum]
           gi|357197325|gb|AET62922.1| ribosomal protein S12
           (mitochondrion) [Millettia pinnata]
           gi|357197364|gb|AET62960.1| ribosomal protein S12
           (mitochondrion) [Lotus japonicus]
          Length = 125

 Score =  214 bits (546), Expect = 4e-54
 Identities = 107/119 (89%), Positives = 107/119 (89%)
 Frame = -2

Query: 358 MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGXXXXXXXXXXXXPNSALRKIAKVRLSNR 179
           MPTLNQLIRHGREEKRRTDRTRALDQCPQKQG            PNSALRKIAKVRLSNR
Sbjct: 1   MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 60

Query: 178 HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA 2
           HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA
Sbjct: 61  HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA 119


>ref|NP_064075.2| rps12 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435095|ref|YP_004222313.1| ribosomal protein S12
           [Beta vulgaris subsp. maritima]
           gi|346683187|ref|YP_004842119.1| ribosomal protein S12
           [Beta macrocarpa] gi|87248036|gb|ABD36073.1| ribosomal
           protein S12 [Beta vulgaris subsp. vulgaris]
           gi|148491434|dbj|BAA99468.2| ribosomal protein S12 [Beta
           vulgaris subsp. vulgaris] gi|317905649|emb|CBJ14048.1|
           ribosomal protein S12 [Beta vulgaris subsp. maritima]
           gi|319439828|emb|CBJ17539.1| ribosomal protein S12 [Beta
           vulgaris subsp. maritima] gi|320148728|emb|CBJ23366.1|
           ribosomal protein S12 [Beta vulgaris subsp. maritima]
           gi|345500105|emb|CBX24923.1| ribosomal protein S12 [Beta
           macrocarpa] gi|384939150|emb|CBL51997.1| ribosomal
           protein S12 (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 125

 Score =  214 bits (544), Expect = 8e-54
 Identities = 106/119 (89%), Positives = 107/119 (89%)
 Frame = -2

Query: 358 MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGXXXXXXXXXXXXPNSALRKIAKVRLSNR 179
           MPT+NQLIRHGREEKRRTDRTRALDQCPQKQG            PNSALRKIAKVRLSNR
Sbjct: 1   MPTINQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 60

Query: 178 HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA 2
           HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA
Sbjct: 61  HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA 119


>emb|CAA89889.1| ribosomal protein S12 [Magnolia x soulangeana]
          Length = 125

 Score =  213 bits (541), Expect = 2e-53
 Identities = 106/119 (89%), Positives = 107/119 (89%)
 Frame = -2

Query: 358 MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGXXXXXXXXXXXXPNSALRKIAKVRLSNR 179
           MPTLNQLIRHGREEKRRTDRTRALDQCPQKQG            PNSALRKIAKVRLSNR
Sbjct: 1   MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVLTRTPKKPNSALRKIAKVRLSNR 60

Query: 178 HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA 2
           HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIP+RRRGRSKYGA
Sbjct: 61  HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPNRRRGRSKYGA 119


>ref|YP_003587377.1| ribosomal protein S12 [Cucurbita pepo] gi|259156830|gb|ACV96691.1|
           ribosomal protein S12 [Cucurbita pepo]
          Length = 125

 Score =  213 bits (541), Expect = 2e-53
 Identities = 106/119 (89%), Positives = 107/119 (89%)
 Frame = -2

Query: 358 MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGXXXXXXXXXXXXPNSALRKIAKVRLSNR 179
           MPTLNQLIRHGREEKRRTDRTRALDQCPQKQG            PNSALRKIAKVRLSNR
Sbjct: 1   MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRLSTRTPKKPNSALRKIAKVRLSNR 60

Query: 178 HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA 2
           HDIFA+IPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA
Sbjct: 61  HDIFAHIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA 119


>ref|YP_003587241.1| ribosomal protein S12 [Citrullus lanatus]
           gi|259156786|gb|ACV96648.1| ribosomal protein S12
           [Citrullus lanatus]
          Length = 123

 Score =  213 bits (541), Expect = 2e-53
 Identities = 106/119 (89%), Positives = 107/119 (89%)
 Frame = -2

Query: 358 MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGXXXXXXXXXXXXPNSALRKIAKVRLSNR 179
           MPTLNQLIRHGREEKRRTDRTRALDQCPQKQG            PNSALRKIAKVRLSNR
Sbjct: 1   MPTLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNR 60

Query: 178 HDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA 2
           HDIFA+IPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA
Sbjct: 61  HDIFAHIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGA 119