BLASTX nr result

ID: Coptis21_contig00022138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022138
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262774.2| PREDICTED: putative BTB/POZ domain-containin...   410   e-112
ref|XP_003635572.1| PREDICTED: putative BTB/POZ domain-containin...   402   e-110
emb|CBI25777.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002531260.1| Root phototropism protein, putative [Ricinus...   379   e-103
emb|CBI41104.3| unnamed protein product [Vitis vinifera]              375   e-102

>ref|XP_002262774.2| PREDICTED: putative BTB/POZ domain-containing protein DOT3-like,
            partial [Vitis vinifera]
          Length = 571

 Score =  410 bits (1053), Expect = e-112
 Identities = 210/340 (61%), Positives = 257/340 (75%), Gaps = 2/340 (0%)
 Frame = +2

Query: 122  KSLQVDRPQKPSSDYIGVERVNDQSTVIPVPNKRVNITEKVNEYERSWFPT-QTPTDLII 298
            KSL + RP  P S+    ++V+DQS V  VP+K V I +   + E SWF T Q PTDL I
Sbjct: 3    KSLTLGRPLSPGSESDYNDQVHDQSIV--VPSKLVTIADSFEKKEHSWFVTSQVPTDLTI 60

Query: 299  QVEDVNFYVHKLPLISRSEHLSQLNRRSHSSDNGYDFKLDNFPGGVETFETVLKFCYGLP 478
            QV+D+ FY HK PL+SR  ++SQ+  +   S+ GYD KL+NFPGG ETFE +LKFCYGLP
Sbjct: 61   QVQDITFYAHKYPLVSRCGYISQIELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP 120

Query: 479  VDLTPTNVATLRCAAEFLQMTEEYEESNLIAKTEAFLTFIVLSSWRDSITVMKSCESLSP 658
            VDL P N A+LRCA+EFL+MTEE +E NLI+KTE FLTF+VLSSWRDSITV+KSCE+LSP
Sbjct: 121  VDLNPNNAASLRCASEFLEMTEELDEGNLISKTEVFLTFVVLSSWRDSITVLKSCENLSP 180

Query: 659  WAENLQIVRR*SDSIASKIIRRNSKCNETENDERWYFDDVSGLRIDHFVRIITAIKAKGT 838
            WAENLQIVRR  DSIA K  + NS   ET ++E W+FDDV+ LRIDHF+RI+T  +AKG 
Sbjct: 181  WAENLQIVRRCCDSIAWKASQDNSTTGETISEEHWWFDDVATLRIDHFMRIMTTARAKGL 240

Query: 839  KPEVIGACIMHYAEKWLPSTNAELKS-QINRYGINELHMSIFSGRKEEGTKGRNKDHKRM 1015
            KPE+IG+CIMHYAEKWLP  +  L+  +    G NEL +SI SGR++EG  G NK+ K +
Sbjct: 241  KPEIIGSCIMHYAEKWLPGMDVALEGPRAFGCGKNELQLSILSGRRQEGGVGHNKELKMI 300

Query: 1016 IEVLVSILPPQREAVSCKFLLWMLKMGLVYLATPALVSEL 1135
            IE LVSILPP++EAVSCKFLL MLKM +VY AT  LVSEL
Sbjct: 301  IESLVSILPPEKEAVSCKFLLQMLKMSVVYSATQVLVSEL 340


>ref|XP_003635572.1| PREDICTED: putative BTB/POZ domain-containing protein DOT3-like,
            partial [Vitis vinifera]
          Length = 556

 Score =  402 bits (1033), Expect = e-110
 Identities = 199/309 (64%), Positives = 242/309 (78%), Gaps = 2/309 (0%)
 Frame = +2

Query: 215  NKRVNITEKVNEYERSWFPT-QTPTDLIIQVEDVNFYVHKLPLISRSEHLSQLNRRSHSS 391
            +K V I + + + E SWF T Q PTDL IQV+D+ FY HK PL+SR  ++SQ+  +   S
Sbjct: 1    SKLVTIADSLEKKEHSWFVTSQVPTDLTIQVQDITFYAHKYPLVSRCGYISQIELQPSIS 60

Query: 392  DNGYDFKLDNFPGGVETFETVLKFCYGLPVDLTPTNVATLRCAAEFLQMTEEYEESNLIA 571
            + GYD KL+NFPGG ETFE +LKFCYGLPVDL P N A+LRCA+EFL+MTEE +E NLI+
Sbjct: 61   NLGYDLKLENFPGGSETFEIILKFCYGLPVDLNPNNAASLRCASEFLEMTEELDEGNLIS 120

Query: 572  KTEAFLTFIVLSSWRDSITVMKSCESLSPWAENLQIVRR*SDSIASKIIRRNSKCNETEN 751
            KTEAFLTF+VLSSWRDSITV+KSCE+LSPWAENLQI+RR  DSIA K  + NS   ET +
Sbjct: 121  KTEAFLTFVVLSSWRDSITVLKSCENLSPWAENLQIIRRCCDSIAWKASQDNSTTGETIS 180

Query: 752  DERWYFDDVSGLRIDHFVRIITAIKAKGTKPEVIGACIMHYAEKWLPSTNAELKS-QINR 928
            +E W+FDDV+ LRIDHF RI+TA +AKG KPE+IG+CIMHYAEKWLP  +  L+  +   
Sbjct: 181  EEGWWFDDVATLRIDHFTRIMTAARAKGLKPEIIGSCIMHYAEKWLPGMDVALEGPRAFG 240

Query: 929  YGINELHMSIFSGRKEEGTKGRNKDHKRMIEVLVSILPPQREAVSCKFLLWMLKMGLVYL 1108
            YG NEL +SI SGR++EG  G NK+ K +IE LVSILPP++EAVSCKFLLWMLKM +VY 
Sbjct: 241  YGKNELQLSILSGRRQEGGVGHNKELKMIIESLVSILPPEKEAVSCKFLLWMLKMSVVYS 300

Query: 1109 ATPALVSEL 1135
            AT  LVSEL
Sbjct: 301  ATQVLVSEL 309


>emb|CBI25777.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  384 bits (986), Expect = e-104
 Identities = 200/339 (58%), Positives = 242/339 (71%), Gaps = 1/339 (0%)
 Frame = +2

Query: 122  KSLQVDRPQKPSSDYIGVERVNDQSTVIPVPNKRVNITEKVNEYERSWFPT-QTPTDLII 298
            KSL + RP  P S+    ++V+DQS V  VP+K V I +   + E SWF T Q PTDL I
Sbjct: 3    KSLTLGRPLSPGSESDYNDQVHDQSIV--VPSKLVTIADSFEKKEHSWFVTSQVPTDLTI 60

Query: 299  QVEDVNFYVHKLPLISRSEHLSQLNRRSHSSDNGYDFKLDNFPGGVETFETVLKFCYGLP 478
            QV+D+ FY HK PL+SR  ++SQ+  +   S+ GYD KL+NFPGG ETFE +LKFCYGLP
Sbjct: 61   QVQDITFYAHKYPLVSRCGYISQIELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP 120

Query: 479  VDLTPTNVATLRCAAEFLQMTEEYEESNLIAKTEAFLTFIVLSSWRDSITVMKSCESLSP 658
            VDL P N A+LRCA+EFL+MTEE +E NLI+KTE FLTF+VLSSWRDSITV+KSCE+LSP
Sbjct: 121  VDLNPNNAASLRCASEFLEMTEELDEGNLISKTEVFLTFVVLSSWRDSITVLKSCENLSP 180

Query: 659  WAENLQIVRR*SDSIASKIIRRNSKCNETENDERWYFDDVSGLRIDHFVRIITAIKAKGT 838
            WAENLQIVRR  DSIA K  + NS   ET ++E W+FDDV+ LRIDHF+RI+T  +AKG 
Sbjct: 181  WAENLQIVRRCCDSIAWKASQDNSTTGETISEEHWWFDDVATLRIDHFMRIMTTARAKGL 240

Query: 839  KPEVIGACIMHYAEKWLPSTNAELKSQINRYGINELHMSIFSGRKEEGTKGRNKDHKRMI 1018
            KPE+IG+CIMHYAEKWLP                           +EG  G NK+ K +I
Sbjct: 241  KPEIIGSCIMHYAEKWLPG-------------------------MDEGGVGHNKELKMII 275

Query: 1019 EVLVSILPPQREAVSCKFLLWMLKMGLVYLATPALVSEL 1135
            E LVSILPP++EAVSCKFLL MLKM +VY AT  LVSEL
Sbjct: 276  ESLVSILPPEKEAVSCKFLLQMLKMSVVYSATQVLVSEL 314


>ref|XP_002531260.1| Root phototropism protein, putative [Ricinus communis]
            gi|223529145|gb|EEF31124.1| Root phototropism protein,
            putative [Ricinus communis]
          Length = 643

 Score =  379 bits (973), Expect = e-103
 Identities = 192/352 (54%), Positives = 251/352 (71%), Gaps = 3/352 (0%)
 Frame = +2

Query: 89   PDMISSHRMTMK-SLQVDRPQKPSSDYIGVERVNDQSTVIPVPNKRVNITEKVNEYERSW 265
            P++ ++  + MK S  V R     SD  GV++ +     I +P K V  T+   + E SW
Sbjct: 6    PNLSTTRTVDMKKSRHVVRSHSSESDSDGVDQDHGHDKSIIIPTKVVATTDIFEKKEDSW 65

Query: 266  FPT-QTPTDLIIQVEDVNFYVHKLPLISRSEHLSQLNRRSHSSDNGYDFKLDNFPGGVET 442
            F T Q PTDL +QV+D+ F VHK PL+S+  ++ +L  +   S+ GY+ KL+NFPGG E 
Sbjct: 66   FVTSQIPTDLSVQVQDITFTVHKYPLVSKCGYIGRLELQPSISNFGYELKLENFPGGSEA 125

Query: 443  FETVLKFCYGLPVDLTPTNVATLRCAAEFLQMTEEYEESNLIAKTEAFLTFIVLSSWRDS 622
            FE +LKFCYGLP+DL P N+A LRCA+EFL+M+EE E+ NLI+KTEAFLTF+VLSSW+D+
Sbjct: 126  FEIILKFCYGLPLDLNPNNIAALRCASEFLEMSEELEDGNLISKTEAFLTFVVLSSWKDT 185

Query: 623  ITVMKSCESLSPWAENLQIVRR*SDSIASKIIRRNSKCNETENDERWYFDDVSGLRIDHF 802
            ITV+KSCE+LSPWAENLQIVRR  DSIA K  R NS  +   N+E W+FDDV+ LR DHF
Sbjct: 186  ITVLKSCETLSPWAENLQIVRRCCDSIAWKASRDNSTVHNIINEEGWWFDDVATLRTDHF 245

Query: 803  VRIITAIKAKGTKPEVIGACIMHYAEKWLPSTNAELKS-QINRYGINELHMSIFSGRKEE 979
            +RI+TA++AKG KPE+ G CIMHYA +WLP  + EL+  +  RYG NEL   I  GR ++
Sbjct: 246  MRIVTAVRAKGAKPEITGKCIMHYASRWLPGMDVELEGLRGYRYGKNELQFGILCGRNKD 305

Query: 980  GTKGRNKDHKRMIEVLVSILPPQREAVSCKFLLWMLKMGLVYLATPALVSEL 1135
               G +K+ K +IE +V +LPPQ EAV CKFLL MLKM +VY A+PAL+SEL
Sbjct: 306  EGVGHSKEQKNIIESIVRLLPPQPEAVPCKFLLKMLKMAIVYSASPALISEL 357


>emb|CBI41104.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  375 bits (964), Expect = e-102
 Identities = 189/309 (61%), Positives = 227/309 (73%), Gaps = 1/309 (0%)
 Frame = +2

Query: 212  PNKRVNITEKVNEYERSWFPT-QTPTDLIIQVEDVNFYVHKLPLISRSEHLSQLNRRSHS 388
            P+K V I + + + E SWF T Q PTDL IQV+D+ FY HK PL+SR  ++SQ+  +   
Sbjct: 1    PSKLVTIADSLEKKEHSWFVTSQVPTDLTIQVQDITFYAHKYPLVSRCGYISQIELQPSI 60

Query: 389  SDNGYDFKLDNFPGGVETFETVLKFCYGLPVDLTPTNVATLRCAAEFLQMTEEYEESNLI 568
            S+ GYD KL+NFPGG ETFE +LKFCYGLPVDL P N A+LRCA+EFL+MTEE +E NLI
Sbjct: 61   SNLGYDLKLENFPGGSETFEIILKFCYGLPVDLNPNNAASLRCASEFLEMTEELDEGNLI 120

Query: 569  AKTEAFLTFIVLSSWRDSITVMKSCESLSPWAENLQIVRR*SDSIASKIIRRNSKCNETE 748
            +KTEAFLTF+VLSSWRDSITV+KSCE+LSPWAENLQI+RR  DSIA K  + NS   ET 
Sbjct: 121  SKTEAFLTFVVLSSWRDSITVLKSCENLSPWAENLQIIRRCCDSIAWKASQDNSTTGETI 180

Query: 749  NDERWYFDDVSGLRIDHFVRIITAIKAKGTKPEVIGACIMHYAEKWLPSTNAELKSQINR 928
            ++E W+FDDV+ LRIDHF RI+TA +AKG KPE+IG+CIMHYAEKWLP            
Sbjct: 181  SEEGWWFDDVATLRIDHFTRIMTAARAKGLKPEIIGSCIMHYAEKWLPG----------- 229

Query: 929  YGINELHMSIFSGRKEEGTKGRNKDHKRMIEVLVSILPPQREAVSCKFLLWMLKMGLVYL 1108
                           +EG  G NK+ K +IE LVSILPP++EAVSCKFLLWMLKM +VY 
Sbjct: 230  --------------MDEGGVGHNKELKMIIESLVSILPPEKEAVSCKFLLWMLKMSVVYS 275

Query: 1109 ATPALVSEL 1135
            AT  LVSEL
Sbjct: 276  ATQVLVSEL 284


Top