BLASTX nr result

ID: Coptis21_contig00022113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022113
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140459.1| PREDICTED: regulator of nonsense transcripts...    87   1e-15
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...    85   5e-15
emb|CBI27489.3| unnamed protein product [Vitis vinifera]               85   5e-15
tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea m...    84   1e-14
ref|XP_003552892.1| PREDICTED: uncharacterized protein LOC100820...    83   3e-14

>ref|XP_004140459.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
           sativus]
          Length = 770

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   EDFDVRVKSVDGFQGGEQDIIIISTVRSNNGGDTGFLSNFQHTNVALTRAKYVDLWFLVD 181
           E F V+VKS+DGFQGGE+D+IIISTVRSNNG + GFLSN Q TNVALTRA++  LW + D
Sbjct: 644 EGFGVKVKSIDGFQGGEEDVIIISTVRSNNGHNIGFLSNKQRTNVALTRARFC-LWIVGD 702

Query: 182 QKLL 193
            K L
Sbjct: 703 AKTL 706


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/63 (68%), Positives = 51/63 (80%)
 Frame = +2

Query: 5   DFDVRVKSVDGFQGGEQDIIIISTVRSNNGGDTGFLSNFQHTNVALTRAKYVDLWFLVDQ 184
           +F V+VK+VDGFQGGE+DIIII TVRSN GG  GFLSN Q TNVALTRA+Y  LW L ++
Sbjct: 775 NFSVKVKTVDGFQGGEEDIIIICTVRSNTGGSIGFLSNPQRTNVALTRARYC-LWILGNE 833

Query: 185 KLL 193
           + L
Sbjct: 834 RTL 836


>emb|CBI27489.3| unnamed protein product [Vitis vinifera]
          Length = 2562

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/63 (68%), Positives = 51/63 (80%)
 Frame = +2

Query: 5   DFDVRVKSVDGFQGGEQDIIIISTVRSNNGGDTGFLSNFQHTNVALTRAKYVDLWFLVDQ 184
           +F V+VK+VDGFQGGE+DIIII TVRSN GG  GFLSN Q TNVALTRA+Y  LW L ++
Sbjct: 721 NFSVKVKTVDGFQGGEEDIIIICTVRSNTGGSIGFLSNPQRTNVALTRARYC-LWILGNE 779

Query: 185 KLL 193
           + L
Sbjct: 780 RTL 782


>tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea mays]
          Length = 2606

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
 Frame = +2

Query: 2   EDFDVRVKSVDGFQGGEQDIIIISTVRSNNGGDTGFLSNFQHTNVALTRAKYVDLWFLVD 181
           ++F VRVKS+DGFQG E DIII+STVRSN  G+ GFL++ Q TNVALTRA++  LW L +
Sbjct: 702 DNFHVRVKSIDGFQGEEDDIIILSTVRSNERGNVGFLADIQRTNVALTRARHC-LWILGN 760

Query: 182 QKLLY---TIYTQPISNISRQ 235
              LY   T++T  +S+  R+
Sbjct: 761 ANTLYKSGTVWTDLVSDAQRR 781


>ref|XP_003552892.1| PREDICTED: uncharacterized protein LOC100820164 [Glycine max]
          Length = 1054

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/63 (65%), Positives = 50/63 (79%)
 Frame = +2

Query: 5   DFDVRVKSVDGFQGGEQDIIIISTVRSNNGGDTGFLSNFQHTNVALTRAKYVDLWFLVDQ 184
           DF ++V +VDGFQGGE+D+IIISTVR NN G  GFLSNFQ TNVALTRA+Y  LW + + 
Sbjct: 793 DFSLKVSTVDGFQGGEEDVIIISTVRYNNMGYVGFLSNFQRTNVALTRARYC-LWIVGNS 851

Query: 185 KLL 193
           + L
Sbjct: 852 ETL 854


Top