BLASTX nr result

ID: Coptis21_contig00022081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022081
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vi...   304   2e-80
ref|XP_002529941.1| Auxin response factor, putative [Ricinus com...   282   8e-74
ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|2...   279   9e-73
ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|2...   273   4e-71
gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   273   5e-71

>ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  304 bits (778), Expect = 2e-80
 Identities = 161/272 (59%), Positives = 202/272 (74%), Gaps = 8/272 (2%)
 Frame = -2

Query: 995  GARHAQFGISLSDLHIN-KLQSSLFPTCFQRLDHVAPPSRIPSGLMVGNPNNTENVSCLL 819
            GARHAQ+GISLSDLH+N KLQS LFPT FQR D     SRI +G++  +  N E++SCLL
Sbjct: 444  GARHAQYGISLSDLHLNNKLQSGLFPTSFQRFDQ---HSRITNGIITAHRKNNESISCLL 500

Query: 818  TMGNSNQSSKKSDEGKAPQFLLFGQPILTEQQISLRFSTDTVSHIPNGNKGSD----KTE 651
            TMGNS+Q+ +KS   K PQFLLFGQPILTEQQ+S   S+D VS +  G   SD    K +
Sbjct: 501  TMGNSSQNLEKSANEKTPQFLLFGQPILTEQQMSRTCSSDAVSQVLTGKSSSDGSSDKAK 560

Query: 650  SISESLP---HQRSELKNPSCQVLPWYKDHRMAELDLETGHCKVFLESEDVGRTLDLSVL 480
             IS+ L     Q+ + +N S     W++  +  E+ L+TGHCKVF+ESEDVGR+LDLSVL
Sbjct: 561  KISDGLGSTLEQKGKPENLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVL 620

Query: 479  RSYEELYSKLANMFGIERSEMLSHVLYRDAEGAVKHTGDEPFCEFMKTAQRLTVLIESGK 300
             SYEELY++LANMFGIERSE  SHVLYRDA GAVKHTGDEPF +F K A+RLT+L++SG 
Sbjct: 621  GSYEELYTRLANMFGIERSETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTILMDSGS 680

Query: 299  ENVGRSWIKGLKDTDNGLKSSNERGGLLSMFA 204
             N+GR+WI G+++ +NGL SSN+ G  LS+FA
Sbjct: 681  NNIGRTWITGMRNAENGLDSSNKTGP-LSIFA 711


>ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
            gi|223530571|gb|EEF32449.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 709

 Score =  282 bits (722), Expect = 8e-74
 Identities = 155/271 (57%), Positives = 190/271 (70%), Gaps = 7/271 (2%)
 Frame = -2

Query: 995  GARHAQFGISLSDLHINKLQSSLFPTCFQRLDHVAPPSRIPSGLMVGNPNNTENVSCLLT 816
            GARHAQFGISLSDL +NKLQS LF +  QR +     SR+    M  N N+ EN+SCLLT
Sbjct: 444  GARHAQFGISLSDLQLNKLQSGLFLSSLQRFNS---HSRVSESFMKSNTNSNENLSCLLT 500

Query: 815  MGNSNQSSKKSDEGKAPQFLLFGQPILTEQQISLRFSTDTVSHIPNGNKGSD------KT 654
            MGNSN +S+KSD  K  QF+LFGQPILTEQQIS   STD VS + +    SD      K 
Sbjct: 501  MGNSNTNSEKSDNVKRHQFVLFGQPILTEQQISRSCSTDAVSQVLSKKLSSDESPEKAKI 560

Query: 653  ESISESLPHQRSELKNPSCQVLPWYKDHRMAELDLETGHCKVFLESEDVGRTLDLSVLRS 474
              +  S P +++  +  +   L W   H   E  L+ GHCKVFLESEDVGRTLDLSVL S
Sbjct: 561  HDVLGSTPEKQTSPEKSASTGLSWQSLHT-TETGLDAGHCKVFLESEDVGRTLDLSVLGS 619

Query: 473  YEELYSKLANMFGIERSEMLSHVLYRDAEGAVKHTGDEPFCEFMKTAQRLTVLIE-SGKE 297
            YEELYS+LANMFGIERSEML HVLYRDA GA++ TGDEPF  F KTA+RLT+L+  +  +
Sbjct: 620  YEELYSRLANMFGIERSEMLHHVLYRDAAGAIRQTGDEPFSVFAKTAKRLTILMNPASSD 679

Query: 296  NVGRSWIKGLKDTDNGLKSSNERGGLLSMFA 204
            N+GR WI+G++ T+NGL++SN +   LS+FA
Sbjct: 680  NIGRPWIRGMRSTENGLEASN-KADPLSIFA 709


>ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|222850909|gb|EEE88456.1|
            predicted protein [Populus trichocarpa]
          Length = 671

 Score =  279 bits (713), Expect = 9e-73
 Identities = 145/238 (60%), Positives = 174/238 (73%), Gaps = 1/238 (0%)
 Frame = -2

Query: 995  GARHAQFGISLSDLHINKLQSSLFPTCFQRLDHVAPPSRIPSGLMVGNPNNTENVSCLLT 816
            GARHAQF +S SDLH NKLQS LFP  FQR DH A PSRI SG  +GN   +EN+SCLLT
Sbjct: 435  GARHAQFELSSSDLHFNKLQSGLFPVDFQRRDHAASPSRISSGNFMGNTKKSENISCLLT 494

Query: 815  MGNSNQSSKKSDEGKAPQFLLFGQPILTEQQISLRFSTDT-VSHIPNGNKGSDKTESISE 639
            MGNS+QS K+S E K P F+LFGQ I+T+QQ S   S DT  +   +GN G   ++    
Sbjct: 495  MGNSSQSLKESSETKTPHFVLFGQLIVTDQQSSQSCSGDTNANSSSDGNLGKASSDGSGS 554

Query: 638  SLPHQRSELKNPSCQVLPWYKDHRMAELDLETGHCKVFLESEDVGRTLDLSVLRSYEELY 459
            +L  Q   ++N S +   WYKDH+  +L LET HCKVFLESED+GRTLDLSVL SYEEL+
Sbjct: 555  AL-QQNGPMENSSDERSTWYKDHQKTDLGLETDHCKVFLESEDIGRTLDLSVLGSYEELH 613

Query: 458  SKLANMFGIERSEMLSHVLYRDAEGAVKHTGDEPFCEFMKTAQRLTVLIESGKENVGR 285
             KLA+MFGIE SEMLS+VLYRDA GA KH GDEPF EF+KTA+RLT+L  + ++N GR
Sbjct: 614  RKLASMFGIESSEMLSNVLYRDAAGATKHAGDEPFSEFLKTARRLTILSYASRDNFGR 671


>ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|222865410|gb|EEF02541.1|
            predicted protein [Populus trichocarpa]
          Length = 669

 Score =  273 bits (699), Expect = 4e-71
 Identities = 143/237 (60%), Positives = 169/237 (71%)
 Frame = -2

Query: 995  GARHAQFGISLSDLHINKLQSSLFPTCFQRLDHVAPPSRIPSGLMVGNPNNTENVSCLLT 816
            GARHAQFG+S SDLH NKLQ+ LFP  FQRLD  APPSRI +   VGN  N+E++SCLLT
Sbjct: 434  GARHAQFGLSSSDLHFNKLQAGLFPVDFQRLDRAAPPSRISNSNFVGNTQNSESISCLLT 493

Query: 815  MGNSNQSSKKSDEGKAPQFLLFGQPILTEQQISLRFSTDTVSHIPNGNKGSDKTESISES 636
            MGNS+Q  K SD  K P  LLFGQ I+T+QQ S   S DT ++  +           S S
Sbjct: 494  MGNSSQGMKGSDT-KTPHILLFGQLIVTDQQSSQSCSGDTNANSSSDGHPGKAISDGSGS 552

Query: 635  LPHQRSELKNPSCQVLPWYKDHRMAELDLETGHCKVFLESEDVGRTLDLSVLRSYEELYS 456
               Q   L+N S    PWYKD++  +  LETGHCKVF+ESEDVGRTLDLSVL SYEEL+ 
Sbjct: 553  ASQQNGPLENSSGGRCPWYKDYQKTDPGLETGHCKVFMESEDVGRTLDLSVLGSYEELHR 612

Query: 455  KLANMFGIERSEMLSHVLYRDAEGAVKHTGDEPFCEFMKTAQRLTVLIESGKENVGR 285
            KL NMFGIE SEMLS+VLYR+A GA KH GDEPF EF+KTA+RLT+L ++  +NVGR
Sbjct: 613  KLVNMFGIESSEMLSNVLYRNAAGATKHAGDEPFSEFLKTARRLTILSDASSDNVGR 669


>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  273 bits (698), Expect = 5e-71
 Identities = 143/245 (58%), Positives = 174/245 (71%), Gaps = 9/245 (3%)
 Frame = -2

Query: 995  GARHAQFGISLSDLHINKLQSSLFPTCFQRLDHVAPPSRIPSGLMVGNPNNTENVSCLLT 816
            GARHA +G+SLSD+H+NKL + LFP  F  LDH A PS+  +  M+  P  +EN+SCLLT
Sbjct: 457  GARHAHYGLSLSDMHLNKLHTGLFPAGFPPLDHAAAPSKFSNNTMIQKPTMSENLSCLLT 516

Query: 815  MGNSNQSSKKSDEGKAPQFLLFGQPILTEQQISLRFSTDTVSHIPNGNKGSD------KT 654
            M +S Q+SKK D+ K PQ +LFGQPILTEQQISL  S DTVS +  GN  SD        
Sbjct: 517  MSHSTQTSKKPDDVKPPQLILFGQPILTEQQISLSSSGDTVSPVLTGNSSSDGNADKMAN 576

Query: 653  ESISESLPHQRSELKNPSCQVLPWYKDHR-MAELDLETGHCKVFLESEDVGRTLDLSVLR 477
             S +     Q+S  +  SC+   WYKD+R   E  LETGHCKVF+ESEDVGRTLDLS+L 
Sbjct: 577  HSDNSGSALQQSIQERSSCEGFQWYKDNRHETEPHLETGHCKVFMESEDVGRTLDLSLLG 636

Query: 476  SYEELYSKLANMFGIERSEMLSHVLYRDAEGAVKHTGDEPF--CEFMKTAQRLTVLIESG 303
            SY+ELY KLA+MFGI+ SE L+HVLYRD  GAVKH GDEPF   +FMKTA+RLT+L++ G
Sbjct: 637  SYDELYRKLADMFGIDNSETLNHVLYRDGTGAVKHVGDEPFSCSDFMKTARRLTILMDLG 696

Query: 302  KENVG 288
              NVG
Sbjct: 697  STNVG 701


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