BLASTX nr result

ID: Coptis21_contig00022060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022060
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300748.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-12
ref|XP_002893061.1| predicted protein [Arabidopsis lyrata subsp....    73   4e-11
ref|XP_002510438.1| NAD dependent epimerase/dehydratase, putativ...    73   4e-11
gb|EEE54277.1| hypothetical protein OsJ_01183 [Oryza sativa Japo...    73   4e-11
gb|EAY73386.1| hypothetical protein OsI_01268 [Oryza sativa Indi...    73   4e-11

>ref|XP_002300748.1| predicted protein [Populus trichocarpa] gi|222842474|gb|EEE80021.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 48/116 (41%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
 Frame = +3

Query: 300 STNNNRTMFILGFGYVAQFFAKELIKDD-----------NXXXXXXXXXXXXXXXXXXXX 446
           S + NR MFILG G+V QFFA+ L K+                                 
Sbjct: 54  SESQNR-MFILGMGFVCQFFAQSLQKEGWVVTGTCTSKTKKKHLEEKGFHVHLLDANQPE 112

Query: 447 VSCLNSLTDATHLLVSIPPITSGDQVLDRHRNLLQSKLCNENLQWLCYLSSTGVYG 614
           +S LN+L   THLLVSIPP+      + +H  LL+S L + NLQWLCYLSST VYG
Sbjct: 113 LSTLNALKCYTHLLVSIPPVGCAGDPMLQHEELLRSTLLDGNLQWLCYLSSTSVYG 168


>ref|XP_002893061.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338903|gb|EFH69320.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 14/126 (11%)
 Frame = +3

Query: 282 ESLGGGSTNNNRTMFILGFGYVAQFFAKELIKDDNXXXXXXXXXXXXXXXXXXXXVSC-- 455
           +S+   S + NR MFILG G+V  FFA++L K+ N                    ++   
Sbjct: 43  QSVAPDSESRNR-MFILGMGFVGGFFAQQL-KEANWVVSGTCRSDPKKKEWEKRGINLHP 100

Query: 456 -----------LNSLTDATHLLVSIPPITS-GDQVLDRHRNLLQSKLCNENLQWLCYLSS 599
                      L+S+ D THLL+SIPP+   GD +L R+  LL+ KL + NL+WLCYLSS
Sbjct: 101 FSADSPEWSLLLDSVKDYTHLLISIPPLADIGDPML-RNVELLRGKLSSGNLRWLCYLSS 159

Query: 600 TGVYGD 617
           T VYGD
Sbjct: 160 TSVYGD 165


>ref|XP_002510438.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
           gi|223551139|gb|EEF52625.1| NAD dependent
           epimerase/dehydratase, putative [Ricinus communis]
          Length = 343

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 57/162 (35%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
 Frame = +3

Query: 186 MSVSSFPTAPQLFRVRH------GNSLGFPKVTCNEKKESLGGGSTNNNRTMFILGFGYV 347
           M +   P +  L  VRH         L    ++ + K + +   S N    MFILG G++
Sbjct: 1   MEIYQIPASYPLREVRHFPRNYMSTFLPISAISSHSKTDKIELESRNR---MFILGMGFI 57

Query: 348 AQFFAKELIKDD-----------NXXXXXXXXXXXXXXXXXXXXVSCLNSLTDATHLLVS 494
            QFFA+ L  +                                  S LN L   THLLVS
Sbjct: 58  GQFFAQNLKNEGWVVTGTSTSTIKKEQLQERGFDICLFDANEPQFSTLNRLKHYTHLLVS 117

Query: 495 IPPITS-GDQVLDRHRNLLQSKLCNENLQWLCYLSSTGVYGD 617
           IP +   GD VL +HR LL+S L + NLQWL YLSST VYGD
Sbjct: 118 IPSVVGIGDPVL-QHRELLRSSLMDGNLQWLGYLSSTSVYGD 158


>gb|EEE54277.1| hypothetical protein OsJ_01183 [Oryza sativa Japonica Group]
          Length = 333

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 38/55 (69%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +3

Query: 456 LNSLTDATHLLVSIPPITS-GDQVLDRHRNLLQSKLCNENLQWLCYLSSTGVYGD 617
           L SL DATHLL+SIPPI   GD +L  H NL Q+ L N NLQWLCYLSST VYGD
Sbjct: 86  LRSLQDATHLLISIPPIPGIGDPLLSSHSNL-QTTLSNSNLQWLCYLSSTSVYGD 139


>gb|EAY73386.1| hypothetical protein OsI_01268 [Oryza sativa Indica Group]
          Length = 363

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 38/55 (69%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +3

Query: 456 LNSLTDATHLLVSIPPITS-GDQVLDRHRNLLQSKLCNENLQWLCYLSSTGVYGD 617
           L SL DATHLL+SIPPI   GD +L  H NL Q+ L N NLQWLCYLSST VYGD
Sbjct: 116 LRSLQDATHLLISIPPIPGIGDPLLSSHSNL-QTTLSNSNLQWLCYLSSTSVYGD 169


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