BLASTX nr result

ID: Coptis21_contig00022024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022024
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25963.1| unknown [Picea sitchensis]                             146   4e-33
ref|XP_002316393.1| predicted protein [Populus trichocarpa] gi|2...   141   9e-32
ref|XP_003633469.1| PREDICTED: uncharacterized protein LOC100854...   139   5e-31
emb|CBI31396.3| unnamed protein product [Vitis vinifera]              139   5e-31
ref|XP_002311069.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30

>gb|ABK25963.1| unknown [Picea sitchensis]
          Length = 212

 Score =  146 bits (368), Expect = 4e-33
 Identities = 65/116 (56%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
 Frame = -3

Query: 579 SFSPVTMENNVSNSHPQEKKPSAPSTFIGEEKRFNE---NVPTFVNQAAITWHEKRREWV 409
           S SP  MENNVSNSH   + PS  ST   EE +      N  TFVN A I W+E+RREW+
Sbjct: 97  SSSPEDMENNVSNSHSMRRNPSVGSTSQAEETQLTNDSTNSTTFVNHALIMWNERRREWL 156

Query: 408 GDQSQKQQIVPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 241
           G++SQ Q  +P++P+ISW+ TY+DLL+T++PF QP+PLPEM+DFLVD+WH+EGL++
Sbjct: 157 GNRSQNQPQMPREPIISWNTTYDDLLATNQPFPQPVPLPEMIDFLVDVWHEEGLYE 212


>ref|XP_002316393.1| predicted protein [Populus trichocarpa] gi|222865433|gb|EEF02564.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  141 bits (356), Expect = 9e-32
 Identities = 69/110 (62%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
 Frame = -3

Query: 561 MENNVSNSHPQEKKPSAPSTFIGEEKRFNE---NVPTFVNQAAITWHEKRREWVGDQSQK 391
           ME N   SH  EK+P   ST    E    E   +   F+N AAI WHE RR+W GDQSQ+
Sbjct: 1   MEVNPVRSHSNEKQPLEHSTSTNGEHEHTEKEKSASVFINHAAIAWHESRRKWTGDQSQQ 60

Query: 390 QQIVPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 241
            Q + KDP+ISWS TYEDLLST EPF +PIPLPEMVDFLVDIWHDEGLFD
Sbjct: 61  PQRMIKDPIISWSTTYEDLLSTHEPFPEPIPLPEMVDFLVDIWHDEGLFD 110


>ref|XP_003633469.1| PREDICTED: uncharacterized protein LOC100854399 [Vitis vinifera]
          Length = 111

 Score =  139 bits (350), Expect = 5e-31
 Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
 Frame = -3

Query: 558 ENNVSNSHPQEKKPSAPSTFIGEEKRFNE-NVPTFVNQAAITWHEKRREWVGDQSQKQQI 382
           E N   SH  EK+    S    E+K   E +   F+N AAI WH++RREWVGDQSQK Q 
Sbjct: 5   EVNTGGSHSNEKQTLECSASANEQKEPMEVSTFVFINHAAIAWHDRRREWVGDQSQKSQR 64

Query: 381 VPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 241
             KDP+ISWSMTYEDLLST+EPFS+PIPL EMVDFLVDIW DEGL+D
Sbjct: 65  KQKDPIISWSMTYEDLLSTNEPFSEPIPLTEMVDFLVDIWQDEGLYD 111


>emb|CBI31396.3| unnamed protein product [Vitis vinifera]
          Length = 109

 Score =  139 bits (350), Expect = 5e-31
 Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
 Frame = -3

Query: 558 ENNVSNSHPQEKKPSAPSTFIGEEKRFNE-NVPTFVNQAAITWHEKRREWVGDQSQKQQI 382
           E N   SH  EK+    S    E+K   E +   F+N AAI WH++RREWVGDQSQK Q 
Sbjct: 3   EVNTGGSHSNEKQTLECSASANEQKEPMEVSTFVFINHAAIAWHDRRREWVGDQSQKSQR 62

Query: 381 VPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 241
             KDP+ISWSMTYEDLLST+EPFS+PIPL EMVDFLVDIW DEGL+D
Sbjct: 63  KQKDPIISWSMTYEDLLSTNEPFSEPIPLTEMVDFLVDIWQDEGLYD 109


>ref|XP_002311069.1| predicted protein [Populus trichocarpa] gi|222850889|gb|EEE88436.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  137 bits (344), Expect = 2e-30
 Identities = 68/110 (61%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
 Frame = -3

Query: 561 MENNVSNSHPQEKKPSAPSTFIGEEKRFNE---NVPTFVNQAAITWHEKRREWVGDQSQK 391
           ME N  +SH  EK+ S  ST    E    E   +   FVN AAI WHE RR+W G+QS++
Sbjct: 1   MEVNSVSSHSNEKRSSEHSTSTNGEHMNTEKEKSTSVFVNHAAIAWHESRRKWTGNQSRQ 60

Query: 390 QQIVPKDPVISWSMTYEDLLSTSEPFSQPIPLPEMVDFLVDIWHDEGLFD 241
            Q   KDP+ISWS TYEDLLST EPFS+PIPL EMVDFLVDIWHDEGLFD
Sbjct: 61  PQRTTKDPIISWSTTYEDLLSTQEPFSEPIPLSEMVDFLVDIWHDEGLFD 110


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