BLASTX nr result

ID: Coptis21_contig00021899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021899
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277099.1| PREDICTED: uncharacterized protein LOC100244...    61   8e-08
emb|CAN82730.1| hypothetical protein VITISV_035708 [Vitis vinifera]    61   8e-08
ref|NP_567349.1| thioredoxin family protein [Arabidopsis thalian...    60   1e-07
ref|XP_002874600.1| hypothetical protein ARALYDRAFT_911277 [Arab...    60   1e-07
dbj|BAH19637.1| AT4G10000 [Arabidopsis thaliana]                       60   1e-07

>ref|XP_002277099.1| PREDICTED: uncharacterized protein LOC100244724 [Vitis vinifera]
           gi|297741048|emb|CBI31360.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -1

Query: 124 TQNQQSTSFLSLLCPLLKVFAASDPSQERNSYLEVATSSLS 2
           T    STSFLS+LCPLLK+F+A DPSQERN  LEVATSSLS
Sbjct: 82  TGTTPSTSFLSVLCPLLKLFSAGDPSQERNYLLEVATSSLS 122


>emb|CAN82730.1| hypothetical protein VITISV_035708 [Vitis vinifera]
          Length = 381

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -1

Query: 124 TQNQQSTSFLSLLCPLLKVFAASDPSQERNSYLEVATSSLS 2
           T    STSFLS+LCPLLK+F+A DPSQERN  LEVATSSLS
Sbjct: 82  TGTTPSTSFLSVLCPLLKLFSAGDPSQERNYLLEVATSSLS 122


>ref|NP_567349.1| thioredoxin family protein [Arabidopsis thaliana]
           gi|30681283|ref|NP_849353.1| thioredoxin family protein
           [Arabidopsis thaliana] gi|332657427|gb|AEE82827.1|
           thioredoxin family protein [Arabidopsis thaliana]
           gi|332657428|gb|AEE82828.1| thioredoxin family protein
           [Arabidopsis thaliana]
          Length = 333

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
 Frame = -1

Query: 262 CQVSFNFPSCNLYCFPNKK--------IKNHYKIVAESSNSEENGHLTTAPVLETQNQQS 107
           C  + +FPS  ++     K        ++   ++  +SSNSE  G    A    + N  S
Sbjct: 11  CHPTASFPSSMVHSNRFSKRISGNGNWVRERRRLYVKSSNSE--GKKEEAAQKSSSNNTS 68

Query: 106 TSFLSLLCPLLKVFAASDPSQERNSYLEVATSSLS 2
            SFLS LCPLLKVF+  DPSQ+RN  LEVATSSL+
Sbjct: 69  -SFLSFLCPLLKVFSGGDPSQQRNHALEVATSSLA 102


>ref|XP_002874600.1| hypothetical protein ARALYDRAFT_911277 [Arabidopsis lyrata subsp.
           lyrata] gi|297320437|gb|EFH50859.1| hypothetical protein
           ARALYDRAFT_911277 [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/68 (45%), Positives = 46/68 (67%)
 Frame = -1

Query: 205 IKNHYKIVAESSNSEENGHLTTAPVLETQNQQSTSFLSLLCPLLKVFAASDPSQERNSYL 26
           ++   ++  +SSNSE   + ++    ++ +  ++SFLS LCPLLKVF+  DPSQ RN  L
Sbjct: 41  VRERRRLSVKSSNSEAKSNESSQ---KSSSNNTSSFLSFLCPLLKVFSGGDPSQRRNHAL 97

Query: 25  EVATSSLS 2
           EVATSSL+
Sbjct: 98  EVATSSLA 105


>dbj|BAH19637.1| AT4G10000 [Arabidopsis thaliana]
          Length = 333

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
 Frame = -1

Query: 262 CQVSFNFPSCNLYCFPNKK--------IKNHYKIVAESSNSEENGHLTTAPVLETQNQQS 107
           C  + +FPS  ++     K        ++   ++  +SSNSE  G    A    + N  S
Sbjct: 11  CHPTASFPSSMVHSNRFSKRISGNGNWVRERRRLYVKSSNSE--GKKEEAAQKSSSNNTS 68

Query: 106 TSFLSLLCPLLKVFAASDPSQERNSYLEVATSSLS 2
            SFLS LCPLLKVF+  DPSQ+RN  LEVATSSL+
Sbjct: 69  -SFLSFLCPLLKVFSGGDPSQQRNHALEVATSSLA 102


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