BLASTX nr result

ID: Coptis21_contig00021861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021861
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632255.1| PREDICTED: uncharacterized protein LOC100242...   187   2e-45
emb|CBI24314.3| unnamed protein product [Vitis vinifera]              187   2e-45
ref|XP_002523227.1| conserved hypothetical protein [Ricinus comm...   160   2e-37
ref|XP_002873561.1| hypothetical protein ARALYDRAFT_488073 [Arab...   150   2e-34
dbj|BAC43370.1| unknown protein [Arabidopsis thaliana]                144   1e-32

>ref|XP_003632255.1| PREDICTED: uncharacterized protein LOC100242629 [Vitis vinifera]
          Length = 594

 Score =  187 bits (475), Expect = 2e-45
 Identities = 96/187 (51%), Positives = 125/187 (66%), Gaps = 10/187 (5%)
 Frame = +1

Query: 130 IKTLLNFYSNKIWSRFISFIPFRDFNLLSKLSNFYXXXXXXXXXXXXXXXXXXXXXXXXX 309
           +KTL++ YSNK+W+R I+ +PF   N L K+S+ Y                         
Sbjct: 12  VKTLISLYSNKLWNRIINILPFSHSNFLGKISSLYLQAIRTRSRRRRPSLPLPLPSHSLD 71

Query: 310 -------ASRVFDVLEDILDHIFSSLHNIQKNLQFWQCRAEGTNAQKVYFMFFERGPRAF 468
                  ASRVFDVLEDIL+H+F +LHNIQKNLQFWQ RAE +NA+K YFM FERGPRAF
Sbjct: 72  TSVIPMEASRVFDVLEDILEHLFLNLHNIQKNLQFWQSRAEESNARKAYFMIFERGPRAF 131

Query: 469 VDGTIQLLS---GRGSRLQYLCHSAAAHISERVAILTSLRHCLASFLAQVYTEVDKYGED 639
           +  T+Q +     +GS LQ L  SA+AHISER+ ILTSLR+ LA+FLAQV+ ++DK+GE+
Sbjct: 132 ITRTVQFIRESVAQGSSLQLLSQSASAHISERITILTSLRYSLATFLAQVHIDIDKFGEE 191

Query: 640 LIKNPEK 660
           L+ +PEK
Sbjct: 192 LVNDPEK 198


>emb|CBI24314.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  187 bits (475), Expect = 2e-45
 Identities = 96/187 (51%), Positives = 125/187 (66%), Gaps = 10/187 (5%)
 Frame = +1

Query: 130 IKTLLNFYSNKIWSRFISFIPFRDFNLLSKLSNFYXXXXXXXXXXXXXXXXXXXXXXXXX 309
           +KTL++ YSNK+W+R I+ +PF   N L K+S+ Y                         
Sbjct: 12  VKTLISLYSNKLWNRIINILPFSHSNFLGKISSLYLQAIRTRSRRRRPSLPLPLPSHSLD 71

Query: 310 -------ASRVFDVLEDILDHIFSSLHNIQKNLQFWQCRAEGTNAQKVYFMFFERGPRAF 468
                  ASRVFDVLEDIL+H+F +LHNIQKNLQFWQ RAE +NA+K YFM FERGPRAF
Sbjct: 72  TSVIPMEASRVFDVLEDILEHLFLNLHNIQKNLQFWQSRAEESNARKAYFMIFERGPRAF 131

Query: 469 VDGTIQLLS---GRGSRLQYLCHSAAAHISERVAILTSLRHCLASFLAQVYTEVDKYGED 639
           +  T+Q +     +GS LQ L  SA+AHISER+ ILTSLR+ LA+FLAQV+ ++DK+GE+
Sbjct: 132 ITRTVQFIRESVAQGSSLQLLSQSASAHISERITILTSLRYSLATFLAQVHIDIDKFGEE 191

Query: 640 LIKNPEK 660
           L+ +PEK
Sbjct: 192 LVNDPEK 198


>ref|XP_002523227.1| conserved hypothetical protein [Ricinus communis]
           gi|223537523|gb|EEF39148.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 609

 Score =  160 bits (405), Expect = 2e-37
 Identities = 84/187 (44%), Positives = 121/187 (64%), Gaps = 6/187 (3%)
 Frame = +1

Query: 118 ESPMIKTLLNFYSNKIWSRFISFIPFRDFNLLSKLSNFYXXXXXXXXXXXXXXXXXXXXX 297
           E+  +K L++FYSN +W+   +F   R  + LS+ +  +                     
Sbjct: 28  ETKGVKFLISFYSNYLWNSLANFNFLRKISFLSRQTAAFSTFRRRRACLPLPLPSYSPES 87

Query: 298 XXXX--ASRVFDVLEDILDHIFSSLHNIQKNLQFWQCRAEGTNAQKVYFMFFERGPRAFV 471
                 AS V+DVLEDI++HI  +LH++QKNL FWQ RAEG+N++K+YFM FERGPRA +
Sbjct: 88  SLVVKEASGVYDVLEDIIEHILINLHSVQKNLHFWQSRAEGSNSRKLYFMMFERGPRALI 147

Query: 472 DGTIQLL----SGRGSRLQYLCHSAAAHISERVAILTSLRHCLASFLAQVYTEVDKYGED 639
           DGT+QLL    +  G  L ++C SA+++ISER+ +LT+LR  LA+FLA+VY EVD+ GE 
Sbjct: 148 DGTLQLLQQCIADGGPSLHHVCQSASSYISERLTVLTTLRRGLATFLAEVYMEVDRCGEA 207

Query: 640 LIKNPEK 660
           L+K+PEK
Sbjct: 208 LVKDPEK 214


>ref|XP_002873561.1| hypothetical protein ARALYDRAFT_488073 [Arabidopsis lyrata subsp.
           lyrata] gi|297319398|gb|EFH49820.1| hypothetical protein
           ARALYDRAFT_488073 [Arabidopsis lyrata subsp. lyrata]
          Length = 602

 Score =  150 bits (379), Expect = 2e-34
 Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 11/206 (5%)
 Frame = +1

Query: 76  MSSDALANPNYYNTESPMIKTLLNFYSNKIWSRFISFIPFRDFNLLSKLSNFYXXXXXXX 255
           M S   AN +  +T    +  L+ FYS+ +W+R  S +P  +   L K+SN Y       
Sbjct: 1   MDSQPPANESSPSTALSNVGELVPFYSSYLWNRLASLLPTSNSIFLGKISNLYRQTVSRK 60

Query: 256 XXXXXXXXXXXXXXXXXX--------ASRVFDVLEDILDHIFSSLHNIQKNLQFWQCRAE 411
                                      +R+  VLE+I+  + S+LH+IQK+L FW+ RAE
Sbjct: 61  RSISFPLPLPSEFPNSSTITSNVSADTARIHGVLEEIMADVLSNLHDIQKSLDFWRSRAE 120

Query: 412 GTNAQKVYFMFFERGPRAFVDGTIQLLS---GRGSRLQYLCHSAAAHISERVAILTSLRH 582
           G+NA+K YFM FERGP AFV+ + + +S      S +Q+LC S+++H++ER+ +L  LR 
Sbjct: 121 GSNARKAYFMIFERGPTAFVNESTKFVSKSLSEDSAMQHLCQSSSSHMTERMRVLVELRS 180

Query: 583 CLASFLAQVYTEVDKYGEDLIKNPEK 660
            LASFLAQ+Y E+DK GEDL+KNPEK
Sbjct: 181 ALASFLAQLYVELDKRGEDLVKNPEK 206


>dbj|BAC43370.1| unknown protein [Arabidopsis thaliana]
          Length = 602

 Score =  144 bits (364), Expect = 1e-32
 Identities = 80/206 (38%), Positives = 116/206 (56%), Gaps = 11/206 (5%)
 Frame = +1

Query: 76  MSSDALANPNYYNTESPMIKTLLNFYSNKIWSRFISFIPFRDFNLLSKLSNFYXXXXXXX 255
           M S    N +  +T       L+ FYS+ +W+R  S +P      L K+SN Y       
Sbjct: 1   MDSQPPVNESTPSTALSNFGELVPFYSSYLWNRLASLLPTSKPIFLGKISNLYRQTVSRK 60

Query: 256 XXXXXXXXXXXXXXXXXX--------ASRVFDVLEDILDHIFSSLHNIQKNLQFWQCRAE 411
                                      +R+  VLE+I+  + S+LH+IQK+L FW+ RAE
Sbjct: 61  RSISFPLPLPSDFPSSSTITSNVSADTARIHGVLEEIMADVLSNLHDIQKSLDFWRSRAE 120

Query: 412 GTNAQKVYFMFFERGPRAFVDGTIQLLS---GRGSRLQYLCHSAAAHISERVAILTSLRH 582
           G+NA+K YFM FERGP AFV+ + + +S     GS +Q+LC S+++H++ER+ +L  LR 
Sbjct: 121 GSNARKAYFMIFERGPTAFVNESTKFVSKSLSEGSAMQHLCQSSSSHMTERMRVLVELRS 180

Query: 583 CLASFLAQVYTEVDKYGEDLIKNPEK 660
            LASF+AQ+Y E+DK GEDL+K PEK
Sbjct: 181 ALASFIAQLYVELDKRGEDLVKIPEK 206


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