BLASTX nr result

ID: Coptis21_contig00021492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021492
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni...   337   1e-90
emb|CBI25461.3| unnamed protein product [Vitis vinifera]              337   1e-90
ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative ...   326   3e-87
emb|CAN67855.1| hypothetical protein VITISV_041255 [Vitis vinifera]   323   1e-86
ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|2...   323   3e-86

>ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis vinifera]
          Length = 1716

 Score =  337 bits (865), Expect = 1e-90
 Identities = 164/227 (72%), Positives = 190/227 (83%)
 Frame = +3

Query: 3    SIFRWLESCLLHGCSSINVDDLPDLIRKDGSSVVSWGRKIVSFYSLLSGAERTGRQISSG 182
            S+FRWLE CL +GC+S N++DLP LIRKDG SV+ W RKIVSFYSLLSGA++ GR++SSG
Sbjct: 668  SLFRWLEHCLQYGCNSANINDLPPLIRKDGHSVI-WARKIVSFYSLLSGAKQAGRKLSSG 726

Query: 183  IYCDIVGGSSRTPEESTVLAMVAEGFGLKQLDLLPGAVSLALRHALDNCRESPPTDWPAA 362
            +YC++  GSS + EE TVLAMV E FGL+QLDLLP  VSL LRHALD CRESPP+DWPAA
Sbjct: 727  VYCNLATGSSSSSEELTVLAMVGEKFGLQQLDLLPAGVSLPLRHALDKCRESPPSDWPAA 786

Query: 363  AYVLIGREDLALSCFEHARKSTDCEVQNTIDLISISAPYMLHLHPVTIPSSVSDTIGTDG 542
            AYVL+GREDLALSC  H+ K  + E+Q  ++LIS+S PYML LHPVTIPS+ SDTIG D 
Sbjct: 787  AYVLLGREDLALSCLAHSHKYKELEIQTNVNLISMSTPYMLLLHPVTIPSTSSDTIGLDN 846

Query: 543  VKVEDADSLDGSMIDGMEHIFNSSTQLRYGRDLRLNEVRCLLCSAKP 683
             K ED DS+DGSM DGMEHIFNSSTQLRYGRDLRLNEVR LLCSA+P
Sbjct: 847  TKFEDTDSVDGSMTDGMEHIFNSSTQLRYGRDLRLNEVRRLLCSARP 893


>emb|CBI25461.3| unnamed protein product [Vitis vinifera]
          Length = 1931

 Score =  337 bits (865), Expect = 1e-90
 Identities = 164/227 (72%), Positives = 190/227 (83%)
 Frame = +3

Query: 3    SIFRWLESCLLHGCSSINVDDLPDLIRKDGSSVVSWGRKIVSFYSLLSGAERTGRQISSG 182
            S+FRWLE CL +GC+S N++DLP LIRKDG SV+ W RKIVSFYSLLSGA++ GR++SSG
Sbjct: 771  SLFRWLEHCLQYGCNSANINDLPPLIRKDGHSVI-WARKIVSFYSLLSGAKQAGRKLSSG 829

Query: 183  IYCDIVGGSSRTPEESTVLAMVAEGFGLKQLDLLPGAVSLALRHALDNCRESPPTDWPAA 362
            +YC++  GSS + EE TVLAMV E FGL+QLDLLP  VSL LRHALD CRESPP+DWPAA
Sbjct: 830  VYCNLATGSSSSSEELTVLAMVGEKFGLQQLDLLPAGVSLPLRHALDKCRESPPSDWPAA 889

Query: 363  AYVLIGREDLALSCFEHARKSTDCEVQNTIDLISISAPYMLHLHPVTIPSSVSDTIGTDG 542
            AYVL+GREDLALSC  H+ K  + E+Q  ++LIS+S PYML LHPVTIPS+ SDTIG D 
Sbjct: 890  AYVLLGREDLALSCLAHSHKYKELEIQTNVNLISMSTPYMLLLHPVTIPSTSSDTIGLDN 949

Query: 543  VKVEDADSLDGSMIDGMEHIFNSSTQLRYGRDLRLNEVRCLLCSAKP 683
             K ED DS+DGSM DGMEHIFNSSTQLRYGRDLRLNEVR LLCSA+P
Sbjct: 950  TKFEDTDSVDGSMTDGMEHIFNSSTQLRYGRDLRLNEVRRLLCSARP 996


>ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative [Ricinus communis]
            gi|223532263|gb|EEF34066.1| meiotic checkpoint regulator
            cut4, putative [Ricinus communis]
          Length = 1703

 Score =  326 bits (835), Expect = 3e-87
 Identities = 161/227 (70%), Positives = 185/227 (81%)
 Frame = +3

Query: 3    SIFRWLESCLLHGCSSINVDDLPDLIRKDGSSVVSWGRKIVSFYSLLSGAERTGRQISSG 182
            SIFRWLE+CL  GC+S N +DLP LI KDGSSVVSW RKIVSFYSLL GA++ G+Q+SSG
Sbjct: 652  SIFRWLENCLKLGCTSANRNDLPPLIYKDGSSVVSWARKIVSFYSLLCGAKQIGKQLSSG 711

Query: 183  IYCDIVGGSSRTPEESTVLAMVAEGFGLKQLDLLPGAVSLALRHALDNCRESPPTDWPAA 362
            +YC +  GS  T EE TVLAMV E FGL+QLD LP  VSL LRH LD CRESPPTDWPAA
Sbjct: 712  VYCSVALGSYCTSEELTVLAMVGEKFGLQQLDSLPSGVSLPLRHVLDKCRESPPTDWPAA 771

Query: 363  AYVLIGREDLALSCFEHARKSTDCEVQNTIDLISISAPYMLHLHPVTIPSSVSDTIGTDG 542
            AYVL+GREDLA+    H+ KS + E Q+  +LIS+SAPYMLH+HPVTIPS+VSD+ G D 
Sbjct: 772  AYVLLGREDLAMLRLTHSHKSKELETQSKANLISMSAPYMLHMHPVTIPSAVSDSTGLDA 831

Query: 543  VKVEDADSLDGSMIDGMEHIFNSSTQLRYGRDLRLNEVRCLLCSAKP 683
             K +D +S DGSM+DGMEHIFNSSTQL+YGRDLRLNEVR LLCSAKP
Sbjct: 832  SKFDDTESADGSMMDGMEHIFNSSTQLQYGRDLRLNEVRRLLCSAKP 878


>emb|CAN67855.1| hypothetical protein VITISV_041255 [Vitis vinifera]
          Length = 295

 Score =  323 bits (829), Expect = 1e-86
 Identities = 157/218 (72%), Positives = 182/218 (83%)
 Frame = +3

Query: 3   SIFRWLESCLLHGCSSINVDDLPDLIRKDGSSVVSWGRKIVSFYSLLSGAERTGRQISSG 182
           S+FRWLE CL +GC+S N++DLP LIRKDG SV+ W RKIVSFYSLLSGA++ GR++SSG
Sbjct: 66  SLFRWLEHCLQYGCNSANINDLPPLIRKDGHSVI-WARKIVSFYSLLSGAKQAGRKLSSG 124

Query: 183 IYCDIVGGSSRTPEESTVLAMVAEGFGLKQLDLLPGAVSLALRHALDNCRESPPTDWPAA 362
           +YC++  GSS + EE TVLAMV E FGL+QLDLLP  VSL LRHALD CRESPP+DWPAA
Sbjct: 125 VYCNLATGSSSSSEELTVLAMVGEKFGLQQLDLLPAGVSLPLRHALDKCRESPPSDWPAA 184

Query: 363 AYVLIGREDLALSCFEHARKSTDCEVQNTIDLISISAPYMLHLHPVTIPSSVSDTIGTDG 542
           AYVL+GREDLALSC  H+ K  + E+Q  ++LIS+S PYML LHPVTIPS+ SDTIG D 
Sbjct: 185 AYVLLGREDLALSCLAHSHKYKELEIQTNVNLISMSTPYMLLLHPVTIPSTSSDTIGLDN 244

Query: 543 VKVEDADSLDGSMIDGMEHIFNSSTQLRYGRDLRLNEV 656
            K ED DS+DGSM DGMEHIFNSSTQLRYGRDLRLNEV
Sbjct: 245 TKFEDTDSVDGSMTDGMEHIFNSSTQLRYGRDLRLNEV 282


>ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|222851985|gb|EEE89532.1|
            predicted protein [Populus trichocarpa]
          Length = 1929

 Score =  323 bits (827), Expect = 3e-86
 Identities = 160/227 (70%), Positives = 183/227 (80%)
 Frame = +3

Query: 3    SIFRWLESCLLHGCSSINVDDLPDLIRKDGSSVVSWGRKIVSFYSLLSGAERTGRQISSG 182
            S+FRWLE+C+ HGCSS N DDLP LI KDG+ VVSW RKIVSFYSLL G ++TG+++SSG
Sbjct: 670  SLFRWLENCMQHGCSSANTDDLPPLICKDGNFVVSWARKIVSFYSLLCGGKQTGKKLSSG 729

Query: 183  IYCDIVGGSSRTPEESTVLAMVAEGFGLKQLDLLPGAVSLALRHALDNCRESPPTDWPAA 362
            +YC+I  GS  T EE TVLAMV E FGL+QLD LP  VSL LRHALD CRESPPTDW AA
Sbjct: 730  VYCNIAMGSCCTSEELTVLAMVGERFGLQQLDSLPSGVSLPLRHALDKCRESPPTDWSAA 789

Query: 363  AYVLIGREDLALSCFEHARKSTDCEVQNTIDLISISAPYMLHLHPVTIPSSVSDTIGTDG 542
            AYVL+GREDLALS      KS + E Q  ++LIS+S PYMLHLHPVTIPS+VSDT G + 
Sbjct: 790  AYVLLGREDLALSRSALPCKSGELETQPNVNLISMSTPYMLHLHPVTIPSTVSDTTGLES 849

Query: 543  VKVEDADSLDGSMIDGMEHIFNSSTQLRYGRDLRLNEVRCLLCSAKP 683
             K ED+DS DGSM+DGMEHIFNSSTQL+YGRD RLNEVR LLCS +P
Sbjct: 850  AKFEDSDSADGSMMDGMEHIFNSSTQLQYGRDQRLNEVRRLLCSTRP 896


Top