BLASTX nr result
ID: Coptis21_contig00021479
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00021479 (230 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI25522.3| unnamed protein product [Vitis vinifera] 117 1e-24 ref|XP_002319875.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24 ref|XP_003526783.1| PREDICTED: uncharacterized protein LOC100814... 114 6e-24 gb|ACU18885.1| unknown [Glycine max] 114 6e-24 ref|XP_002329184.1| predicted protein [Populus trichocarpa] gi|2... 113 1e-23 >emb|CBI25522.3| unnamed protein product [Vitis vinifera] Length = 464 Score = 117 bits (293), Expect = 1e-24 Identities = 65/85 (76%), Positives = 71/85 (83%), Gaps = 9/85 (10%) Frame = -3 Query: 228 TSDQDLIISYCKADTDDPLEE-NAGSINISNILTGKCLAKIRASSSDP---QMCCT---- 73 TSDQDLIISYCKAD+DDPL E NAGSINISNILTGKCLAKI+AS++ P + CT Sbjct: 365 TSDQDLIISYCKADSDDPLSEGNAGSINISNILTGKCLAKIKASNNFPMENECSCTHASA 424 Query: 72 -RTRNTVAEALEDITALFYDEERNE 1 R R+TVAEALEDITALFYDEERNE Sbjct: 425 SRIRSTVAEALEDITALFYDEERNE 449 >ref|XP_002319875.1| predicted protein [Populus trichocarpa] gi|222858251|gb|EEE95798.1| predicted protein [Populus trichocarpa] Length = 403 Score = 117 bits (292), Expect = 1e-24 Identities = 61/87 (70%), Positives = 66/87 (75%), Gaps = 11/87 (12%) Frame = -3 Query: 228 TSDQDLIISYCKADTDDPLEENAGSINISNILTGKCLAKIRASSSDP-----------QM 82 TSDQDLIISYCKAD+DDPL E GSINISNILTGKCLAKI+A +S P M Sbjct: 302 TSDQDLIISYCKADSDDPLSEGNGSINISNILTGKCLAKIKAGNSFPNENECSQSSKKHM 361 Query: 81 CCTRTRNTVAEALEDITALFYDEERNE 1 C + R+T AEALEDITALFYDEERNE Sbjct: 362 CASTVRSTAAEALEDITALFYDEERNE 388 >ref|XP_003526783.1| PREDICTED: uncharacterized protein LOC100814724 [Glycine max] Length = 478 Score = 114 bits (286), Expect = 6e-24 Identities = 65/96 (67%), Positives = 71/96 (73%), Gaps = 20/96 (20%) Frame = -3 Query: 228 TSDQDLIISYCKADTDDPLEE-NAGSINISNILTGKCLAKIRASSSDP-----------Q 85 TSDQDLIISYCKAD+DD L E NAGSIN+SNILTGKCLAKIRAS+S P Sbjct: 368 TSDQDLIISYCKADSDDSLSEGNAGSINVSNILTGKCLAKIRASNSFPVDNSCSDNPSGS 427 Query: 84 MCC--------TRTRNTVAEALEDITALFYDEERNE 1 CC ++TR+TVAEALEDITALFYDEERNE Sbjct: 428 CCCNSKKRKHGSKTRSTVAEALEDITALFYDEERNE 463 >gb|ACU18885.1| unknown [Glycine max] Length = 239 Score = 114 bits (286), Expect = 6e-24 Identities = 65/96 (67%), Positives = 71/96 (73%), Gaps = 20/96 (20%) Frame = -3 Query: 228 TSDQDLIISYCKADTDDPLEE-NAGSINISNILTGKCLAKIRASSSDP-----------Q 85 TSDQDLIISYCKAD+DD L E NAGSIN+SNILTGKCLAKIRAS+S P Sbjct: 129 TSDQDLIISYCKADSDDSLSEGNAGSINVSNILTGKCLAKIRASNSFPVDNSCSDNPSGS 188 Query: 84 MCC--------TRTRNTVAEALEDITALFYDEERNE 1 CC ++TR+TVAEALEDITALFYDEERNE Sbjct: 189 CCCNSKKRKHGSKTRSTVAEALEDITALFYDEERNE 224 >ref|XP_002329184.1| predicted protein [Populus trichocarpa] gi|222870965|gb|EEF08096.1| predicted protein [Populus trichocarpa] Length = 474 Score = 113 bits (283), Expect = 1e-23 Identities = 63/88 (71%), Positives = 68/88 (77%), Gaps = 12/88 (13%) Frame = -3 Query: 228 TSDQDLIISYCKADTDDPLEE-NAGSINISNILTGKCLAKIRASSSDP-----------Q 85 TSDQDLIISYCKAD+DDPL E NAGSINISNILTGKCLAKI+AS+S P Sbjct: 372 TSDQDLIISYCKADSDDPLSEGNAGSINISNILTGKCLAKIKASNSFPNENECGQNSKKH 431 Query: 84 MCCTRTRNTVAEALEDITALFYDEERNE 1 +R R+T AEALEDITALFYDEERNE Sbjct: 432 RHASRIRSTAAEALEDITALFYDEERNE 459