BLASTX nr result

ID: Coptis21_contig00021479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021479
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25522.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002319875.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003526783.1| PREDICTED: uncharacterized protein LOC100814...   114   6e-24
gb|ACU18885.1| unknown [Glycine max]                                  114   6e-24
ref|XP_002329184.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>emb|CBI25522.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/85 (76%), Positives = 71/85 (83%), Gaps = 9/85 (10%)
 Frame = -3

Query: 228 TSDQDLIISYCKADTDDPLEE-NAGSINISNILTGKCLAKIRASSSDP---QMCCT---- 73
           TSDQDLIISYCKAD+DDPL E NAGSINISNILTGKCLAKI+AS++ P   +  CT    
Sbjct: 365 TSDQDLIISYCKADSDDPLSEGNAGSINISNILTGKCLAKIKASNNFPMENECSCTHASA 424

Query: 72  -RTRNTVAEALEDITALFYDEERNE 1
            R R+TVAEALEDITALFYDEERNE
Sbjct: 425 SRIRSTVAEALEDITALFYDEERNE 449


>ref|XP_002319875.1| predicted protein [Populus trichocarpa] gi|222858251|gb|EEE95798.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/87 (70%), Positives = 66/87 (75%), Gaps = 11/87 (12%)
 Frame = -3

Query: 228 TSDQDLIISYCKADTDDPLEENAGSINISNILTGKCLAKIRASSSDP-----------QM 82
           TSDQDLIISYCKAD+DDPL E  GSINISNILTGKCLAKI+A +S P            M
Sbjct: 302 TSDQDLIISYCKADSDDPLSEGNGSINISNILTGKCLAKIKAGNSFPNENECSQSSKKHM 361

Query: 81  CCTRTRNTVAEALEDITALFYDEERNE 1
           C +  R+T AEALEDITALFYDEERNE
Sbjct: 362 CASTVRSTAAEALEDITALFYDEERNE 388


>ref|XP_003526783.1| PREDICTED: uncharacterized protein LOC100814724 [Glycine max]
          Length = 478

 Score =  114 bits (286), Expect = 6e-24
 Identities = 65/96 (67%), Positives = 71/96 (73%), Gaps = 20/96 (20%)
 Frame = -3

Query: 228 TSDQDLIISYCKADTDDPLEE-NAGSINISNILTGKCLAKIRASSSDP-----------Q 85
           TSDQDLIISYCKAD+DD L E NAGSIN+SNILTGKCLAKIRAS+S P            
Sbjct: 368 TSDQDLIISYCKADSDDSLSEGNAGSINVSNILTGKCLAKIRASNSFPVDNSCSDNPSGS 427

Query: 84  MCC--------TRTRNTVAEALEDITALFYDEERNE 1
            CC        ++TR+TVAEALEDITALFYDEERNE
Sbjct: 428 CCCNSKKRKHGSKTRSTVAEALEDITALFYDEERNE 463


>gb|ACU18885.1| unknown [Glycine max]
          Length = 239

 Score =  114 bits (286), Expect = 6e-24
 Identities = 65/96 (67%), Positives = 71/96 (73%), Gaps = 20/96 (20%)
 Frame = -3

Query: 228 TSDQDLIISYCKADTDDPLEE-NAGSINISNILTGKCLAKIRASSSDP-----------Q 85
           TSDQDLIISYCKAD+DD L E NAGSIN+SNILTGKCLAKIRAS+S P            
Sbjct: 129 TSDQDLIISYCKADSDDSLSEGNAGSINVSNILTGKCLAKIRASNSFPVDNSCSDNPSGS 188

Query: 84  MCC--------TRTRNTVAEALEDITALFYDEERNE 1
            CC        ++TR+TVAEALEDITALFYDEERNE
Sbjct: 189 CCCNSKKRKHGSKTRSTVAEALEDITALFYDEERNE 224


>ref|XP_002329184.1| predicted protein [Populus trichocarpa] gi|222870965|gb|EEF08096.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  113 bits (283), Expect = 1e-23
 Identities = 63/88 (71%), Positives = 68/88 (77%), Gaps = 12/88 (13%)
 Frame = -3

Query: 228 TSDQDLIISYCKADTDDPLEE-NAGSINISNILTGKCLAKIRASSSDP-----------Q 85
           TSDQDLIISYCKAD+DDPL E NAGSINISNILTGKCLAKI+AS+S P            
Sbjct: 372 TSDQDLIISYCKADSDDPLSEGNAGSINISNILTGKCLAKIKASNSFPNENECGQNSKKH 431

Query: 84  MCCTRTRNTVAEALEDITALFYDEERNE 1
              +R R+T AEALEDITALFYDEERNE
Sbjct: 432 RHASRIRSTAAEALEDITALFYDEERNE 459


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