BLASTX nr result

ID: Coptis21_contig00021478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021478
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632222.1| PREDICTED: uncharacterized protein LOC100242...   105   5e-21
ref|XP_002263460.1| PREDICTED: uncharacterized protein LOC100242...   105   5e-21
emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]   103   2e-20
ref|XP_003545975.1| PREDICTED: uncharacterized protein LOC100790...    89   7e-16
ref|XP_002314007.1| predicted protein [Populus trichocarpa] gi|2...    88   9e-16

>ref|XP_003632222.1| PREDICTED: uncharacterized protein LOC100242692 isoform 2 [Vitis
           vinifera]
          Length = 261

 Score =  105 bits (262), Expect = 5e-21
 Identities = 56/108 (51%), Positives = 71/108 (65%)
 Frame = +1

Query: 250 KVRNFSASSDDLASARQLIHGKNCRKKVLESSLKDKAKISDAELKEKWLASLSCPLPEKV 429
           K R F A+S +  +    I   +    VL SS K +A++SD + +E WLASLSCP P++ 
Sbjct: 34  KFRVFCATSLNSTNTHDPIPAPSSTDTVLRSSGKARARVSDTQYRENWLASLSCPFPDEN 93

Query: 430 EELGSEVRSNGSGAGLNWVIGIDPDVSGALALLKTDESGCSAQVFDNP 573
           E  G  + S  S AG   VIGIDPD+SGALALLKT +SGCSAQVFD+P
Sbjct: 94  ERPGIRMDSAESNAGTQCVIGIDPDISGALALLKTGDSGCSAQVFDSP 141


>ref|XP_002263460.1| PREDICTED: uncharacterized protein LOC100242692 isoform 1 [Vitis
           vinifera]
          Length = 291

 Score =  105 bits (262), Expect = 5e-21
 Identities = 56/108 (51%), Positives = 71/108 (65%)
 Frame = +1

Query: 250 KVRNFSASSDDLASARQLIHGKNCRKKVLESSLKDKAKISDAELKEKWLASLSCPLPEKV 429
           K R F A+S +  +    I   +    VL SS K +A++SD + +E WLASLSCP P++ 
Sbjct: 34  KFRVFCATSLNSTNTHDPIPAPSSTDTVLRSSGKARARVSDTQYRENWLASLSCPFPDEN 93

Query: 430 EELGSEVRSNGSGAGLNWVIGIDPDVSGALALLKTDESGCSAQVFDNP 573
           E  G  + S  S AG   VIGIDPD+SGALALLKT +SGCSAQVFD+P
Sbjct: 94  ERPGIRMDSAESNAGTQCVIGIDPDISGALALLKTGDSGCSAQVFDSP 141


>emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]
          Length = 1030

 Score =  103 bits (257), Expect = 2e-20
 Identities = 55/108 (50%), Positives = 70/108 (64%)
 Frame = +1

Query: 250 KVRNFSASSDDLASARQLIHGKNCRKKVLESSLKDKAKISDAELKEKWLASLSCPLPEKV 429
           K R F A+S +  +    I   +    VL SS K + ++SD + +E WLASLSCP P++ 
Sbjct: 34  KFRVFCATSLNSTNTHDPIPAPSSTGTVLRSSGKARVRVSDTQYRENWLASLSCPFPDEN 93

Query: 430 EELGSEVRSNGSGAGLNWVIGIDPDVSGALALLKTDESGCSAQVFDNP 573
           E  G  + S  S AG   VIGIDPD+SGALALLKT +SGCSAQVFD+P
Sbjct: 94  ERPGIRMDSAESNAGTQCVIGIDPDISGALALLKTGDSGCSAQVFDSP 141


>ref|XP_003545975.1| PREDICTED: uncharacterized protein LOC100790125 [Glycine max]
          Length = 290

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 51/123 (41%), Positives = 64/123 (52%)
 Frame = +1

Query: 205 TVVSTSFRTKLQFYNKVRNFSASSDDLASARQLIHGKNCRKKVLESSLKDKAKISDAELK 384
           T+ S  FR      +        + +L+  + ++ GK           K + K SD + K
Sbjct: 28  TISSIHFRAFCASSSSTTTTLTQTQNLSDPQIIVPGK-----------KRRVKASDTQFK 76

Query: 385 EKWLASLSCPLPEKVEELGSEVRSNGSGAGLNWVIGIDPDVSGALALLKTDESGCSAQVF 564
           E WLASLS P PEK   L  E        G  WV+GIDPDVSGA+ALLKT  S CSAQVF
Sbjct: 77  ENWLASLSNPFPEKTHLLNGEHEPTHQNDGSKWVLGIDPDVSGAVALLKTHGSVCSAQVF 136

Query: 565 DNP 573
           D+P
Sbjct: 137 DSP 139


>ref|XP_002314007.1| predicted protein [Populus trichocarpa] gi|222850415|gb|EEE87962.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 48/89 (53%), Positives = 64/89 (71%), Gaps = 5/89 (5%)
 Frame = +1

Query: 322 RKKVLESS-LKDKAKISD-AELKEKWLASLSCPLPEKVEEL---GSEVRSNGSGAGLNWV 486
           +K +L  + +K + K++D A+LK+ WL SL+ PLP + E     G ++  N  G+  NWV
Sbjct: 53  KKTILSRNRVKVREKVADVAQLKQNWLDSLTFPLPNETENTNLGGDDLARNNVGS--NWV 110

Query: 487 IGIDPDVSGALALLKTDESGCSAQVFDNP 573
           IG+DPDVSGALALLK DESGCSAQVFD+P
Sbjct: 111 IGVDPDVSGALALLKIDESGCSAQVFDSP 139


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