BLASTX nr result

ID: Coptis21_contig00021463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021463
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...    95   7e-18
emb|CBI29966.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]      91   1e-16
ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]      91   1e-16
ref|XP_002531584.1| programmed cell death protein, putative [Ric...    89   5e-16

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -3

Query: 264  VTLFQRALQYRDPEKVHLELLGMYERNEQRKLADELLDIMTKRFKHSCKVWLRLVQRL 91
            V +FQRALQY DP+KVHL LLGMYER EQ KLADELL+ MTK+FKHSCKVWLR VQ +
Sbjct: 1691 VKVFQRALQYCDPKKVHLALLGMYERTEQHKLADELLEKMTKKFKHSCKVWLRRVQNV 1748


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -3

Query: 264  VTLFQRALQYRDPEKVHLELLGMYERNEQRKLADELLDIMTKRFKHSCKVWLRLVQRL 91
            V +FQRALQY DP+KVHL LLGMYER EQ KLADELL+ MTK+FKHSCKVWLR VQ +
Sbjct: 1674 VKVFQRALQYCDPKKVHLALLGMYERTEQHKLADELLEKMTKKFKHSCKVWLRRVQNV 1731


>ref|XP_003535096.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 1885

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = -3

Query: 258  LFQRALQYRDPEKVHLELLGMYERNEQRKLADELLDIMTKRFKHSCKVWLRLVQRL 91
            +FQRALQY DP+KV+L LLGMYER EQ  LADELL+ MTK+FKHSCKVWLR +Q L
Sbjct: 1699 VFQRALQYNDPKKVYLALLGMYERTEQHNLADELLNKMTKKFKHSCKVWLRRIQSL 1754


>ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 2174

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = -3

Query: 258  LFQRALQYRDPEKVHLELLGMYERNEQRKLADELLDIMTKRFKHSCKVWLRLVQRL 91
            +FQRALQY DP+KV+L LLGMYER EQ  LADELL+ MTK+FKHSCKVWLR +Q L
Sbjct: 1988 VFQRALQYNDPKKVYLALLGMYERTEQHNLADELLNKMTKKFKHSCKVWLRRIQSL 2043


>ref|XP_002531584.1| programmed cell death protein, putative [Ricinus communis]
            gi|223528780|gb|EEF30787.1| programmed cell death
            protein, putative [Ricinus communis]
          Length = 1330

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = -3

Query: 258  LFQRALQYRDPEKVHLELLGMYERNEQRKLADELLDIMTKRFKHSCKVWLRLVQR 94
            +FQRALQY DP+KVHL LLG+YER EQ KLADELLD M K+FK SCK+WLR VQR
Sbjct: 1144 VFQRALQYCDPKKVHLALLGVYERTEQHKLADELLDRMVKKFKISCKIWLRRVQR 1198


Top