BLASTX nr result

ID: Coptis21_contig00021460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021460
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519138.1| hypothetical protein RCOM_0939100 [Ricinus c...    68   1e-09
emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]    65   1e-08
emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]    64   2e-08
ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854...    63   3e-08
ref|XP_004160514.1| PREDICTED: uncharacterized LOC101221625 [Cuc...    62   7e-08

>ref|XP_002519138.1| hypothetical protein RCOM_0939100 [Ricinus communis]
           gi|223541801|gb|EEF43349.1| hypothetical protein
           RCOM_0939100 [Ricinus communis]
          Length = 545

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
 Frame = -2

Query: 576 LPLSFVNRYLKDDLTSLTLVTSDGHKRLVGCRVYKG-HSAQITEGWKMFAEENHLRVGDV 400
           +P  F  +YL +    L L  SDG +  V  RV K      +  G   F  +N+L+ GDV
Sbjct: 330 VPRGFSEKYLSEAPNYLILEVSDGREWQV--RVRKNCRRLDLGRGLTAFFRDNNLKAGDV 387

Query: 399 CVFEMIKKDPLLKVHIFPKGEATSSTILNMEDGHASSGKQGECVLPIDERHSCAKAYVSL 220
           C+FE+IK   ++K  +F                HA         L I    +C    VS 
Sbjct: 388 CIFELIKNTEVMKASLF----------------HAVQDD-----LEIITSETCESTNVS- 425

Query: 219 AVNNKALKASNTLKLDHPSFKFVMRS-SYARSGYPVPMHFFNTYLQGGYNSVRLKVSDGQ 43
           A + KA+ A+   K  +PSF  V+R  +    G  VP  F   YL      +++KVSDG+
Sbjct: 426 AESKKAIDAARMYKPANPSFMVVLRPYNCYDHGLSVPRIFSKWYLWRARKCIKVKVSDGR 485

Query: 42  TWSV 31
            W++
Sbjct: 486 EWTI 489


>emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]
          Length = 352

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/81 (44%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -2

Query: 576 LPLSFVNRYLKDDLTSLTLVTSDGHKRLVGCRVYKGHSAQITEGWKMFAEENHLRVGDVC 397
           +PLSFV R+ K D    TL  SDG    V   + K    + + GW  FA +N L VGDVC
Sbjct: 263 IPLSFVKRHFKTDXNKTTLSVSDGRTWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDVC 322

Query: 396 VFEMIK-KDPLLKVHIFPKGE 337
            FE+IK     LKV IF   E
Sbjct: 323 AFELIKCTGTSLKVVIFXNNE 343


>emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]
          Length = 617

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
 Frame = -2

Query: 576 LPLSFVNRYLKDDLTSLTLVTSDGH----KRLVGCRVYKGHSAQITEGWKMFAEENHLRV 409
           +P  F+ R+ + D T+ TL  SDG     K ++G R     SA  + GW+ FAE+N L V
Sbjct: 530 VPFHFLKRHFRTDNTNTTLSVSDGRAWSIKYIMGAR-----SAHFSAGWRKFAEDNSLEV 584

Query: 408 GDVCVFEMIK-KDPLLKVHIFPKGE 337
           GDVC FE++K  +  LKV IF K E
Sbjct: 585 GDVCAFELVKCTETSLKVVIFRKKE 609



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 51/188 (27%), Positives = 72/188 (38%), Gaps = 2/188 (1%)
 Frame = -2

Query: 576 LPLSFVNRYLKDDLTSLTLVTSDGHKRLVGCRVYKGHSAQITEGWKMFAEENHLRVGDVC 397
           +PLSFV R+ K D  +  L  SDG    V   + + ++ Q + GW  F  +N L VGDVC
Sbjct: 190 VPLSFVKRHFKRDNNNTILSVSDGRTWSVKY-IKRKNNVQFSSGWTKFVRDNSLEVGDVC 248

Query: 396 VFEMIK-KDPLLKVHIFPKGEATSSTILNMEDGHASSGKQGECVLPIDERHSCAKAYVSL 220
            FE++K     LKV IF   E                          D  H   ++   +
Sbjct: 249 AFELVKCTGTSLKVEIFRNNE--------------------------DATHHLQQSQKPM 282

Query: 219 AVNNKALKASNTLKLDHPSFKFVMRSSYARSGYP-VPMHFFNTYLQGGYNSVRLKVSDGQ 43
               K            P F  ++  S+   GYP +P  F   Y     + V L +  G 
Sbjct: 283 TSTQK------------PHFFRIIHPSFLTHGYPGIPQTFLREYGNSLSHFVFLHLPTGA 330

Query: 42  TWSVRWLE 19
            W V  L+
Sbjct: 331 EWGVELLK 338


>ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854873 [Vitis vinifera]
          Length = 1020

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 36/81 (44%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -2

Query: 576  LPLSFVNRYLKDDLTSLTLVTSDGHKRLVGCRVYKGHSAQITEGWKMFAEENHLRVGDVC 397
            +PLSFV R+ K D    TL  SDG    V   + K    + + GW  FA +N L VGDVC
Sbjct: 931  IPLSFVKRHFKTDNKKTTLSVSDGRTWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDVC 990

Query: 396  VFEMIK-KDPLLKVHIFPKGE 337
             FE+IK     LKV IF   E
Sbjct: 991  AFELIKCTGTSLKVVIFRNNE 1011


>ref|XP_004160514.1| PREDICTED: uncharacterized LOC101221625 [Cucumis sativus]
          Length = 1043

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 36/224 (16%)
 Frame = -2

Query: 579 ILPLSFVNRYLKDDLTSLTLVTSDGHKRLVGCRVYKGHS--AQITEGWKMFAEENHLRVG 406
           ++P  F  +YL D++ S+++ T +G K  +  +  + +   A I+ GW+ F EEN L+ G
Sbjct: 218 VIPKEFAGKYLSDEVGSISIQTENGKKWSLLYKWSESNDEVAYISRGWRDFVEENLLKPG 277

Query: 405 DVCVFEMIKKDPLLKVHI---------FPKGEATSSTILNMEDGHASSGKQGECVLPI-- 259
           DV  FE+IKKD  L   +          PK + T+ST     +        G  VL I  
Sbjct: 278 DVVFFELIKKDKFLFTKLQENITVPSSSPKNK-TASTTNPFFEVQIHKKSYGNTVLNIPL 336

Query: 258 ---DERHSCAKAYVSLAVNNKALKASNTLKLDHPSF-----KFVMRSSYARSG------Y 121
              ++  S    +  L V NK  +      ++H  F     KF  R +  R G       
Sbjct: 337 GFANKHFSPEMHHAKLQVWNKEWEVKLKQYVNHCRFSAGWSKF-YRENMLRDGETCLFEM 395

Query: 120 PVPMHFFNTYLQGGYNSVRLKVSDGQTWSVR---------WLEN 16
            +P  F   Y +   N + LK  DG  W V          WL+N
Sbjct: 396 MIPKKFITDYGKFLSNPICLKTPDGLEWKVESTTTPNGTVWLQN 439


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