BLASTX nr result

ID: Coptis21_contig00021458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021458
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317979.1| predicted protein [Populus trichocarpa] gi|1...   227   9e-58
ref|XP_003524776.1| PREDICTED: geranylgeranyl diphosphate reduct...   225   3e-57
ref|XP_003549679.1| PREDICTED: geranylgeranyl diphosphate reduct...   225   3e-57
emb|CBI15217.3| unnamed protein product [Vitis vinifera]              225   3e-57
ref|XP_002284906.1| PREDICTED: geranylgeranyl diphosphate reduct...   225   3e-57

>ref|XP_002317979.1| predicted protein [Populus trichocarpa] gi|118487707|gb|ABK95678.1|
           unknown [Populus trichocarpa]
           gi|222858652|gb|EEE96199.1| predicted protein [Populus
           trichocarpa]
          Length = 470

 Score =  227 bits (578), Expect = 9e-58
 Identities = 108/115 (93%), Positives = 110/115 (95%)
 Frame = -3

Query: 347 TKCSGEGIYFAAKSGRMCGEAIVEGSANGTRLIDESDLRKYLEKWDKTYWPTYKVLDVLQ 168
           TKCSGEGIYFAAKSGRMC EAIVEGS NG R++DESDLRKYLEKWDKTYWPTYKVLDVLQ
Sbjct: 342 TKCSGEGIYFAAKSGRMCAEAIVEGSGNGKRMVDESDLRKYLEKWDKTYWPTYKVLDVLQ 401

Query: 167 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVTPGNPLEDLKLAVNTIGSLV 3
           KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK V PGNPLEDLKLAVNTIGSLV
Sbjct: 402 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLV 456


>ref|XP_003524776.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
           [Glycine max]
          Length = 462

 Score =  225 bits (573), Expect = 3e-57
 Identities = 105/115 (91%), Positives = 110/115 (95%)
 Frame = -3

Query: 347 TKCSGEGIYFAAKSGRMCGEAIVEGSANGTRLIDESDLRKYLEKWDKTYWPTYKVLDVLQ 168
           TKCSGEGIYFAAKSGRMC EAIVEGS NG R+++E DLRKYLEKWDKTYWPTYKVLD+LQ
Sbjct: 334 TKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQ 393

Query: 167 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVTPGNPLEDLKLAVNTIGSLV 3
           KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTV PGNPLEDLKLA+NTIGSLV
Sbjct: 394 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDLKLAINTIGSLV 448


>ref|XP_003549679.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
           [Glycine max]
          Length = 462

 Score =  225 bits (573), Expect = 3e-57
 Identities = 105/115 (91%), Positives = 110/115 (95%)
 Frame = -3

Query: 347 TKCSGEGIYFAAKSGRMCGEAIVEGSANGTRLIDESDLRKYLEKWDKTYWPTYKVLDVLQ 168
           TKCSGEGIYFAAKSGRMC EAIVEGS NG R+++E DLRKYLEKWDKTYWPTYKVLD+LQ
Sbjct: 334 TKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQ 393

Query: 167 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVTPGNPLEDLKLAVNTIGSLV 3
           KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTV PGNPLEDLKLA+NTIGSLV
Sbjct: 394 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDLKLAINTIGSLV 448


>emb|CBI15217.3| unnamed protein product [Vitis vinifera]
          Length = 351

 Score =  225 bits (573), Expect = 3e-57
 Identities = 107/115 (93%), Positives = 109/115 (94%)
 Frame = -3

Query: 347 TKCSGEGIYFAAKSGRMCGEAIVEGSANGTRLIDESDLRKYLEKWDKTYWPTYKVLDVLQ 168
           TKCSGEGIYFAAKSGRMC EAIVEGS NG R++DE DLRKYLEKWDKTYWPTYKVLDVLQ
Sbjct: 223 TKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVDEGDLRKYLEKWDKTYWPTYKVLDVLQ 282

Query: 167 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVTPGNPLEDLKLAVNTIGSLV 3
           KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK V PGNPLEDLKLAVNTIGSLV
Sbjct: 283 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVVPGNPLEDLKLAVNTIGSLV 337


>ref|XP_002284906.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic
           [Vitis vinifera]
          Length = 467

 Score =  225 bits (573), Expect = 3e-57
 Identities = 107/115 (93%), Positives = 109/115 (94%)
 Frame = -3

Query: 347 TKCSGEGIYFAAKSGRMCGEAIVEGSANGTRLIDESDLRKYLEKWDKTYWPTYKVLDVLQ 168
           TKCSGEGIYFAAKSGRMC EAIVEGS NG R++DE DLRKYLEKWDKTYWPTYKVLDVLQ
Sbjct: 339 TKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVDEGDLRKYLEKWDKTYWPTYKVLDVLQ 398

Query: 167 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVTPGNPLEDLKLAVNTIGSLV 3
           KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK V PGNPLEDLKLAVNTIGSLV
Sbjct: 399 KVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVVPGNPLEDLKLAVNTIGSLV 453


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