BLASTX nr result

ID: Coptis21_contig00021453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021453
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538583.1| PREDICTED: protein SDA1 homolog [Glycine max]      77   1e-12
emb|CBI16831.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_002282097.1| PREDICTED: protein SDA1 homolog [Vitis vinif...    74   9e-12
emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]    74   9e-12
ref|XP_002889990.1| SDA1 family protein [Arabidopsis lyrata subs...    72   6e-11

>ref|XP_003538583.1| PREDICTED: protein SDA1 homolog [Glycine max]
          Length = 826

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  EQEGYETELIQLY*HFDSSLHLFQQQXXXXXXXXXXXXXXXXXDP-ISKDLGDMAMFLSH 248
           + EGYE+EL+ LY  F+SSL LFQ+Q                 DP ++KDLGD AMFL+H
Sbjct: 34  DPEGYESELLLLYNQFNSSLELFQKQAAMNFTSISGIGS----DPTVAKDLGDRAMFLAH 89

Query: 249 VTPFYPTHLSDFPNKLS 299
           VTPFYP HL+DFP KL+
Sbjct: 90  VTPFYPKHLADFPKKLA 106


>emb|CBI16831.3| unnamed protein product [Vitis vinifera]
          Length = 736

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  EQEGYETELIQLY*HFDSSLHLFQQQXXXXXXXXXXXXXXXXXDP-ISKDLGDMAMFLSH 248
           + EGYE+EL+ LY  F+SSL LFQQQ                 DP ++KDLGD A+FLSH
Sbjct: 4   DPEGYESELLLLYSQFNSSLELFQQQAVFTSISGVDT------DPAVAKDLGDRAVFLSH 57

Query: 249 VTPFYPTHLSDFPNKLS 299
           +TPFYP HL++FP +L+
Sbjct: 58  LTPFYPKHLAEFPKQLA 74


>ref|XP_002282097.1| PREDICTED: protein SDA1 homolog [Vitis vinifera]
          Length = 843

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  EQEGYETELIQLY*HFDSSLHLFQQQXXXXXXXXXXXXXXXXXDP-ISKDLGDMAMFLSH 248
           + EGYE+EL+ LY  F+SSL LFQQQ                 DP ++KDLGD A+FLSH
Sbjct: 33  DPEGYESELLLLYSQFNSSLELFQQQAVFTSISGVDT------DPAVAKDLGDRAVFLSH 86

Query: 249 VTPFYPTHLSDFPNKLS 299
           +TPFYP HL++FP +L+
Sbjct: 87  LTPFYPKHLAEFPKQLA 103


>emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]
          Length = 1703

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  EQEGYETELIQLY*HFDSSLHLFQQQXXXXXXXXXXXXXXXXXDP-ISKDLGDMAMFLSH 248
           + EGYE+EL+ LY  F+SSL LFQQQ                 DP ++KDLGD A+FLSH
Sbjct: 33  DPEGYESELLLLYSQFNSSLELFQQQAVFTSISGVDT------DPAVAKDLGDRAVFLSH 86

Query: 249 VTPFYPTHLSDFPNKLS 299
           +TPFYP HL++FP +L+
Sbjct: 87  LTPFYPKHLAEFPKQLA 103


>ref|XP_002889990.1| SDA1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335832|gb|EFH66249.1| SDA1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = +3

Query: 69  REQEGYETELIQLY*HFDSSLHLFQQQXXXXXXXXXXXXXXXXXDP-ISKDLGDMAMFLS 245
           R+ EGYETEL  +Y  F +S+ LFQQQ                 DP +SKDLGD AMFL+
Sbjct: 33  RDPEGYETELQLIYKQFKTSVDLFQQQAALSFSSVGGIGS----DPSVSKDLGDRAMFLA 88

Query: 246 HVTPFYPTHLSDFPNKLS 299
           HVTPFYP  LS+FP +L+
Sbjct: 89  HVTPFYPKQLSEFPAQLT 106


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