BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021451
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003933763.1| PREDICTED: ubiquitin-60S ribosomal protein L...   108   6e-22
ref|XP_003933761.1| PREDICTED: ubiquitin-60S ribosomal protein L...   108   6e-22
ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyr...   107   8e-22
emb|CAI83761.1| Polyubiqutin 2 [Epidinium ecaudatum]                  107   8e-22
emb|CAI83760.1| Polyubiqutin 1 [Epidinium ecaudatum]                  107   8e-22

>ref|XP_003933763.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 153

 Score =  108 bits (269), Expect = 6e-22
 Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI+ +KA   + EG+   + ++L F    L+  + L DY I++ STL+L L     +Q
Sbjct: 20  SDTIKNVKAKIQDKEGIPP-DQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLRGGMQ 78

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + +SKTITLEV+  DTI NVKAKIQ KEGI   Q  LI+ G++L++ RTL+ YNI
Sbjct: 79  IFVK-TLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

Query: 359 ETGSILYAIFRF-GDV 403
           +  SIL+ + R  GDV
Sbjct: 138 QKESILHLVLRLRGDV 153



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +2

Query: 203 SSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNIETGSILY 379
           +SKTITLEV+  DTI+NVKAKIQ KEGI   Q  LI+  ++L++ R L+ YNI+  S L+
Sbjct: 9   TSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYNIQKESTLH 68

Query: 380 AIFRFGDVMEIGV 418
            I R    M+I V
Sbjct: 69  LILRLRGGMQIFV 81


>ref|XP_003933761.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 153

 Score =  108 bits (269), Expect = 6e-22
 Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI+ +KA   + EG+   + ++L F    L+  + L DY I++ STL+L L     +Q
Sbjct: 20  SDTIKNVKAKIQDKEGIPP-DQQRLIFARKQLEDGRNLSDYNIQKESTLHLILRLRGGMQ 78

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + +SKTITLEV+  DTI NVKAKIQ KEGI   Q  LI+ G++L++ RTL+ YNI
Sbjct: 79  IFVK-TLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

Query: 359 ETGSILYAIFRF-GDV 403
           +  SIL+ + R  GDV
Sbjct: 138 QKESILHLVLRLRGDV 153



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
 Frame = +2

Query: 176 VQIYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAY 352
           +QI++K + +SKTITLEV+  DTI+NVKAKIQ KEGI   Q  LI+  ++L++ R L+ Y
Sbjct: 1   MQIFLK-TLTSKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDY 59

Query: 353 NIETGSILYAIFRFGDVMEIGV 418
           NI+  S L+ I R    M+I V
Sbjct: 60  NIQKESTLHLILRLRGGMQIFV 81


>ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
           gi|297316295|gb|EFH46718.1| polyubiquitin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 537

 Score =  107 bits (268), Expect = 8e-22
 Identities = 63/140 (45%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+ + + ++L F    L+  + L DY I++ STL+L L     +Q
Sbjct: 99  SDTIDNVKAKIQDKEGI-LPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 157

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITLEV++ DTI NVKAKI+ KEGI T Q  LI+ G++L++ RTLA YNI
Sbjct: 158 IFVK-TLTGKTITLEVESSDTIDNVKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNI 216

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 217 QKESTLHLVLRLRGGMQIFV 236



 Score =  104 bits (260), Expect = 7e-21
 Identities = 62/140 (44%), Positives = 89/140 (63%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+   + ++L F    L+  + L DY I++ STL+L L     +Q
Sbjct: 175 SDTIDNVKAKIEDKEGIPT-DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 233

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITLEV++ DTI N+KAKIQ KEGI   Q  LI+ G++L++ RTLA YNI
Sbjct: 234 IFVK-TLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 292

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 293 QKESTLHLVLRLRGGMQIFV 312



 Score =  103 bits (257), Expect = 1e-20
 Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+   + ++L F    L+  + L DY I++ STL+L L     +Q
Sbjct: 403 SDTIDNVKAKIQDKEGIPP-DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 461

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGIT-KQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITLEV++ DTI NVKAKIQ KEGI   Q  LI+ G++L++ RTLA YNI
Sbjct: 462 IFVK-TLTGKTITLEVESSDTIDNVKAKIQDKEGIVPDQQRLIFAGKQLEDGRTLADYNI 520

Query: 359 ETGSILYAIFR 391
           +  S L+ + R
Sbjct: 521 QKESTLHLVLR 531



 Score =  102 bits (254), Expect = 3e-20
 Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  LKA   + EG+   + ++L F    L+  + L DY I++ STL+L L     +Q
Sbjct: 251 SDTIDNLKAKIQDKEGIPP-DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 309

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + +TITLEV++ DTI NVKAKIQ KE I   Q  LI+ G++L++ RTLA YNI
Sbjct: 310 IFVK-TLTGRTITLEVESSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYNI 368

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 369 QKESTLHLVLRLCGGMQIFV 388



 Score =  102 bits (254), Expect = 3e-20
 Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + E +   + ++L F    L+  + L DY I++ STL+L L     +Q
Sbjct: 327 SDTIDNVKAKIQDKEEIPA-DQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQ 385

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITLEV++ DTI NVKAKIQ KEGI   Q  LI+ G++L++ RTLA YNI
Sbjct: 386 IFVK-TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 444

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 445 QKESTLHLVLRLRGGMQIFV 464



 Score =  101 bits (252), Expect = 6e-20
 Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           S TI  +KA   + EG+ + + ++L F    L+  + L DY I++ S L+L L     +Q
Sbjct: 23  SYTINNVKAQIQDKEGIPL-DQQRLIFAGKQLEDGRTLADYNIQKESILHLALRLRGGMQ 81

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITLEV++ DTI NVKAKIQ KEGI   Q  LI+ G++L++ RTLA YNI
Sbjct: 82  IFVK-TLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNI 140

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 141 QKESTLHLVLRLRGGMQIFV 160



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
 Frame = +2

Query: 176 VQIYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAY 352
           +QI+ + + + KTITL+ ++  TI NVKA+IQ KEGI   Q  LI+ G++L++ RTLA Y
Sbjct: 4   MQIFAR-TLTEKTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADY 62

Query: 353 NIETGSILYAIFRFGDVMEIGV 418
           NI+  SIL+   R    M+I V
Sbjct: 63  NIQKESILHLALRLRGGMQIFV 84


>emb|CAI83761.1| Polyubiqutin 2 [Epidinium ecaudatum]
          Length = 322

 Score =  107 bits (268), Expect = 8e-22
 Identities = 63/140 (45%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+   + ++L F    L+ N+ L DY I++ STL+L L     +Q
Sbjct: 37  SDTIENVKAKIQDKEGIPP-DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 95

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITL+V+  DTI NVKAKIQ KEGI   Q  LI+ G++L+++RTLA YNI
Sbjct: 96  IFVK-TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 154

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 155 QKESTLHLVLRLRGGMQIFV 174



 Score =  107 bits (267), Expect = 1e-21
 Identities = 63/140 (45%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+   + ++L F    L+ N+ L DY I++ STL+L L     +Q
Sbjct: 113 SDTIENVKAKIQDKEGIPP-DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 171

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITL+V+  DTI NVKAKIQ KEGI   Q  LI+ G++L+++RTLA YNI
Sbjct: 172 IFVK-TFTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 230

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 231 QKESTLHLVLRLRGGMQIFV 250



 Score =  105 bits (262), Expect = 4e-21
 Identities = 60/131 (45%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+   + ++L F    L+ N+ L DY I++ STL+L L     +Q
Sbjct: 189 SDTIENVKAKIQDKEGIPP-DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 247

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITL+V+  DTI NVKAKIQ KEGI   Q  LI+ G++L+++RTLA YNI
Sbjct: 248 IFVK-TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 306

Query: 359 ETGSILYAIFR 391
           +  S L+ + R
Sbjct: 307 QKESTLHLVLR 317



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/98 (48%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
 Frame = +2

Query: 128 IKEGSTLNLFLHSGAKVQIYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDL 304
           I++ STL+L L     +QI+VK + + KTITL+V+  DTI NVKAKIQ KEGI   Q  L
Sbjct: 2   IQKESTLHLVLRLRGGMQIFVK-TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 60

Query: 305 IYLGEELDESRTLAAYNIETGSILYAIFRFGDVMEIGV 418
           I+ G++L+++RTLA YNI+  S L+ + R    M+I V
Sbjct: 61  IFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQIFV 98


>emb|CAI83760.1| Polyubiqutin 1 [Epidinium ecaudatum]
          Length = 378

 Score =  107 bits (268), Expect = 8e-22
 Identities = 63/140 (45%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+   + ++L F    L+ N+ L DY I++ STL+L L     +Q
Sbjct: 17  SDTIENVKAKIQDKEGIPP-DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 75

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITL+V+  DTI NVKAKIQ KEGI   Q  LI+ G++L+++RTLA YNI
Sbjct: 76  IFVK-TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 134

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 135 QKESTLHLVLRLRGGMQIFV 154



 Score =  107 bits (268), Expect = 8e-22
 Identities = 63/140 (45%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+   + ++L F    L+ N+ L DY I++ STL+L L     +Q
Sbjct: 93  SDTIENVKAKIQDKEGIPP-DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 151

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITL+V+  DTI NVKAKIQ KEGI   Q  LI+ G++L+++RTLA YNI
Sbjct: 152 IFVK-TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 210

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 211 QKESTLHLVLRLRGGMQIFV 230



 Score =  107 bits (268), Expect = 8e-22
 Identities = 63/140 (45%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+   + ++L F    L+ N+ L DY I++ STL+L L     +Q
Sbjct: 169 SDTIENVKAKIQDKEGIPP-DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 227

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITL+V+  DTI NVKAKIQ KEGI   Q  LI+ G++L+++RTLA YNI
Sbjct: 228 IFVK-TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 286

Query: 359 ETGSILYAIFRFGDVMEIGV 418
           +  S L+ + R    M+I V
Sbjct: 287 QKESTLHLVLRLRGGMQIFV 306



 Score =  105 bits (262), Expect = 4e-21
 Identities = 60/131 (45%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
 Frame = +2

Query: 2   SDTIRKLKANFSETEGVSMMNLKKLFFGANSLDSNKKLVDYGIKEGSTLNLFLHSGAKVQ 181
           SDTI  +KA   + EG+   + ++L F    L+ N+ L DY I++ STL+L L     +Q
Sbjct: 245 SDTIENVKAKIQDKEGIPP-DQQRLIFAGKQLEDNRTLADYNIQKESTLHLVLRLRGGMQ 303

Query: 182 IYVKLSQSSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNI 358
           I+VK + + KTITL+V+  DTI NVKAKIQ KEGI   Q  LI+ G++L+++RTLA YNI
Sbjct: 304 IFVK-TLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNI 362

Query: 359 ETGSILYAIFR 391
           +  S L+ + R
Sbjct: 363 QKESTLHLVLR 373



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +2

Query: 203 SSKTITLEVDTMDTIRNVKAKIQSKEGI-TKQHDLIYLGEELDESRTLAAYNIETGSILY 379
           + KTITL+V+  DTI NVKAKIQ KEGI   Q  LI+ G++L+++RTLA YNI+  S L+
Sbjct: 6   TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLH 65

Query: 380 AIFRFGDVMEIGV 418
            + R    M+I V
Sbjct: 66  LVLRLRGGMQIFV 78