BLASTX nr result

ID: Coptis21_contig00021442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021442
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]   110   1e-22
emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]   110   2e-22
emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera]   108   3e-22
emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]   108   3e-22
emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]   108   3e-22

>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/156 (39%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
 Frame = +3

Query: 3    RVYKLLMSTKVLTWNARGMGNEATCMNLRKLILKTKPDIFCVQETRIEDLAYFVEMRIWT 182
            RV K  M  K+++WN RG+G++     ++  +   KPD+   QET+ E+        +WT
Sbjct: 824  RVTKFHM--KIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSVWT 881

Query: 183  D-NWQWIGLPSWGQSGGMILAWDTDKVIVEDHLVGTYSITITGSLISDNFKWMATGVYSP 359
              N  W  LP+ G SGG+++ WDT K+  E+ ++G++S++I  +L      W+ + VY P
Sbjct: 882  ARNKDWAALPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLWL-SAVYGP 940

Query: 360  NQNNKDLREDFWLELDDIRA-----WCVGGDFNVIR 452
              NN  LR+D W+EL DI       WCVGGDFNVIR
Sbjct: 941  --NNSALRKDLWVELSDIAGLASPRWCVGGDFNVIR 974


>emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
          Length = 1844

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
 Frame = +3

Query: 18   LMSTKVLTWNARGMGNEATCMNLRKLILKTKPDIFCVQETRIEDLAYFVEMRIWT-DNWQ 194
            L   K+++WN RG+G++     ++  +   KPD+  +QET+ E+    +   +W+  N  
Sbjct: 754  LFHMKIISWNTRGLGSKKKRRVVKNFLSSEKPDVVMIQETKKEECDRRLVGSVWSVRNKD 813

Query: 195  WIGLPSWGQSGGMILAWDTDKVIVEDHLVGTYSITITGSLISDNFKWMATGVYSPNQNNK 374
            W  LP+ G SGG+++ WD+ K+  E+ ++G++S++I  ++      W+ + VY P  NN 
Sbjct: 814  WAALPASGASGGILIIWDSIKMRREEVVLGSFSVSIKFAMDGCESLWL-SAVYGP--NNS 870

Query: 375  DLREDFWLELDDIRA-----WCVGGDFNVIR 452
             LR+DFW+EL DI       WCVGGDFNVIR
Sbjct: 871  ALRKDFWVELSDIAGLSHPRWCVGGDFNVIR 901


>emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera]
          Length = 1726

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
 Frame = +3

Query: 18   LMSTKVLTWNARGMGNEATCMNLRKLILKTKPDIFCVQETRIEDLAYFVEMRIWTD-NWQ 194
            L + K+L+WN RG+G+      +R+ +    PD+  +QET+ E         +W   +  
Sbjct: 721  LSADKILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQETKREIWDRRXVSSVWKGKSLD 780

Query: 195  WIGLPSWGQSGGMILAWDTDKVIVEDHLVGTYSITITGSLISDNFKWMATGVYSPNQNNK 374
            W+ LP+ G SGG+++ WD+ K    + ++G +S+T+  +   + F W+ T VY PN+   
Sbjct: 781  WVALPACGASGGIVILWDSXKFXCSEKVLGXFSVTVKLNSXEEGFFWL-TSVYGPNK--A 837

Query: 375  DLREDFWLELDDIRA-----WCVGGDFNVIR 452
              R+DFW+EL D+       WCVGGDFNVI+
Sbjct: 838  VXRKDFWMELQDLHGLTSPRWCVGGDFNVIK 868


>emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]
          Length = 1780

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
 Frame = +3

Query: 30   KVLTWNARGMGNEATCMNLRKLILKTKPDIFCVQETRIEDLAYFVEMRIWT-DNWQWIGL 206
            K+++WN RG+G++     ++  +   KPD+  +QET+ E    FV   +WT  N  W  L
Sbjct: 755  KIISWNTRGLGSKKKRRVVKXFLRSEKPDVVMIQETKKECDRRFVG-SVWTARNKDWAAL 813

Query: 207  PSWGQSGGMILAWDTDKVIVEDHLVGTYSITITGSLISDNFKWMATGVYSPNQNNKDLRE 386
            P+ G SGG+++ W+  K+  E+ ++G++S++I  +L      W+ + VY P  NN  LR+
Sbjct: 814  PASGASGGILIIWEAKKLCREEVVLGSFSVSIKFALDGCESLWL-SAVYGP--NNSTLRK 870

Query: 387  DFWLELDDI-----RAWCVGGDFNVIR 452
            DFW+EL DI       WCVGGDFNVIR
Sbjct: 871  DFWVELSDIVGLAYPRWCVGGDFNVIR 897


>emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]
          Length = 1532

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/147 (36%), Positives = 90/147 (61%), Gaps = 6/147 (4%)
 Frame = +3

Query: 30  KVLTWNARGMGNEATCMNLRKLILKTKPDIFCVQETRIEDLAYFVEMRIWTD-NWQWIGL 206
           K+++WN RG+G+      ++  +   KPDI  +QET+  +        +WT  N +W+ L
Sbjct: 508 KIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSVWTARNKEWVVL 567

Query: 207 PSWGQSGGMILAWDTDKVIVEDHLVGTYSITITGSLISDNFKWMATGVYSPNQNNKDLRE 386
           P+ G SGG+++ WD+ K++ E+ ++G++S+++  ++      W+ + VY P  N+  LR+
Sbjct: 568 PACGASGGILVIWDSKKLLSEEVVLGSFSVSVKFAMDGSEQFWL-SAVYGP--NSTALRK 624

Query: 387 DFWLELDDI-----RAWCVGGDFNVIR 452
           DFW+EL DI       WCVGGDFNVIR
Sbjct: 625 DFWVELSDIFGLSSPCWCVGGDFNVIR 651


Top