BLASTX nr result

ID: Coptis21_contig00021427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021427
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265066.1| PREDICTED: uncharacterized protein LOC100260...   112   3e-23
ref|XP_002529983.1| conserved hypothetical protein [Ricinus comm...   110   9e-23
ref|XP_002303945.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002871245.1| hypothetical protein ARALYDRAFT_487519 [Arab...   107   1e-21
ref|NP_196316.1| uncharacterized protein [Arabidopsis thaliana] ...   107   1e-21

>ref|XP_002265066.1| PREDICTED: uncharacterized protein LOC100260942 [Vitis vinifera]
          Length = 249

 Score =  112 bits (280), Expect = 3e-23
 Identities = 48/70 (68%), Positives = 60/70 (85%)
 Frame = -3

Query: 212 LVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAG 33
           LVRIALECEK P E+ KL++EP+W +YCNG+K GY VKR+ N +DLN MQ+LHAVSMGAG
Sbjct: 137 LVRIALECEKRPEEKIKLMDEPIWNLYCNGRKMGYAVKREANAEDLNVMQMLHAVSMGAG 196

Query: 32  VLPSDSADMP 3
           VLPS++ D+P
Sbjct: 197 VLPSEAIDLP 206


>ref|XP_002529983.1| conserved hypothetical protein [Ricinus communis]
           gi|223530506|gb|EEF32388.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 212

 Score =  110 bits (276), Expect = 9e-23
 Identities = 46/70 (65%), Positives = 58/70 (82%)
 Frame = -3

Query: 212 LVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAG 33
           LVR+ALECEK P E+TK+++EP+WTMYCNG+KTGYGVKR P  +DL  MQ+LH +SMGAG
Sbjct: 100 LVRVALECEKKPHEKTKIIDEPIWTMYCNGRKTGYGVKRAPTDEDLVVMQILHVISMGAG 159

Query: 32  VLPSDSADMP 3
           V+P D  + P
Sbjct: 160 VIPDDGTEQP 169


>ref|XP_002303945.1| predicted protein [Populus trichocarpa] gi|222841377|gb|EEE78924.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/71 (67%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
 Frame = -3

Query: 212 LVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAG 33
           LVRIALECEK P E+TK+ +EP+WTM+CNG+K+GY VKR+P  +DLN MQ+LH VSMGAG
Sbjct: 147 LVRIALECEKKPHEKTKIEDEPIWTMFCNGRKSGYAVKREPTDEDLNVMQILHVVSMGAG 206

Query: 32  VLPS-DSADMP 3
           V+P+ D AD P
Sbjct: 207 VIPTGDGADQP 217


>ref|XP_002871245.1| hypothetical protein ARALYDRAFT_487519 [Arabidopsis lyrata subsp.
           lyrata] gi|297317082|gb|EFH47504.1| hypothetical protein
           ARALYDRAFT_487519 [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/66 (71%), Positives = 57/66 (86%)
 Frame = -3

Query: 212 LVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAG 33
           LVRIALECEK P+E+TK+++EP+W +YCNGKK+GYGVKR P  +DL  MQ+LHAVSMGAG
Sbjct: 137 LVRIALECEKKPSEKTKIIDEPIWALYCNGKKSGYGVKRQPTEEDLVVMQMLHAVSMGAG 196

Query: 32  VLPSDS 15
           VLP  S
Sbjct: 197 VLPVSS 202


>ref|NP_196316.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759555|dbj|BAB11157.1| unnamed protein product
           [Arabidopsis thaliana] gi|71905551|gb|AAZ52753.1|
           expressed protein [Arabidopsis thaliana]
           gi|332003713|gb|AED91096.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 261

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/66 (71%), Positives = 57/66 (86%)
 Frame = -3

Query: 212 LVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAG 33
           LVRIALECEK P+E+TK+++EP+W +YCNGKK+GYGVKR P  +DL  MQ+LHAVSMGAG
Sbjct: 138 LVRIALECEKKPSEKTKIIDEPIWALYCNGKKSGYGVKRQPTEEDLVVMQMLHAVSMGAG 197

Query: 32  VLPSDS 15
           VLP  S
Sbjct: 198 VLPVSS 203


Top