BLASTX nr result

ID: Coptis21_contig00021420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021420
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300700.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002889045.1| hypothetical protein ARALYDRAFT_476726 [Arab...   195   4e-48
gb|ABK28469.1| unknown [Arabidopsis thaliana]                         193   1e-47
gb|AAM67203.1| pectinesterase, putative [Arabidopsis thaliana]        193   1e-47
ref|NP_177707.1| SKU5 similar 18 protein [Arabidopsis thaliana] ...   193   1e-47

>ref|XP_002300700.1| predicted protein [Populus trichocarpa] gi|222842426|gb|EEE79973.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/155 (62%), Positives = 108/155 (69%)
 Frame = -3

Query: 471 KQVIVINDQFPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPI 292
           KQVIVINDQFPGP                 LTEPFL TWNG+Q RRNSWQDGVQ TNCPI
Sbjct: 40  KQVIVINDQFPGPLLNATTNDVLNINIHNNLTEPFLMTWNGLQMRRNSWQDGVQETNCPI 99

Query: 291 LPGRNWTYSFQMKDQIGSFFYFPSLLLQKAAGGYGAXXXXXXXXXXXPFSTPYKEFDILI 112
           LPGRNWTYSFQ+KDQIGSFFYFPSLLL KAAGGYG            PF  P+ + D+LI
Sbjct: 100 LPGRNWTYSFQVKDQIGSFFYFPSLLLHKAAGGYGPIRVNNREVIPIPFPQPHGDIDVLI 159

Query: 111 GDWFISDYQDMRSSLDRGIPLPSQPDGILINGLGP 7
           GDW+ +D++D+R+ LD G  L   P GILING GP
Sbjct: 160 GDWYSADHRDLRALLDNGTGL-QNPSGILINGRGP 193


>ref|XP_002889045.1| hypothetical protein ARALYDRAFT_476726 [Arabidopsis lyrata subsp.
           lyrata] gi|297334886|gb|EFH65304.1| hypothetical protein
           ARALYDRAFT_476726 [Arabidopsis lyrata subsp. lyrata]
          Length = 545

 Score =  195 bits (495), Expect = 4e-48
 Identities = 98/155 (63%), Positives = 109/155 (70%)
 Frame = -3

Query: 471 KQVIVINDQFPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPI 292
           KQVIVIND FPGP                 L EPFL TWNG+Q R+NSWQDGV+GTNCPI
Sbjct: 45  KQVIVINDMFPGPMLNATANDVIIVNIFNNLHEPFLMTWNGLQLRKNSWQDGVRGTNCPI 104

Query: 291 LPGRNWTYSFQMKDQIGSFFYFPSLLLQKAAGGYGAXXXXXXXXXXXPFSTPYKEFDILI 112
           LPG NWTY FQ+KDQIGS+FYFPSLLLQKAAGGYGA           PF  P +E+DILI
Sbjct: 105 LPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYTPELVPVPFPKPDEEYDILI 164

Query: 111 GDWFISDYQDMRSSLDRGIPLPSQPDGILINGLGP 7
           GDWF +D+  MR+SLD G  LP +PDGIL NG GP
Sbjct: 165 GDWFYADHTVMRASLDTGHSLP-KPDGILFNGRGP 198


>gb|ABK28469.1| unknown [Arabidopsis thaliana]
          Length = 545

 Score =  193 bits (490), Expect = 1e-47
 Identities = 97/155 (62%), Positives = 108/155 (69%)
 Frame = -3

Query: 471 KQVIVINDQFPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPI 292
           KQVIVIND FPGP                 L EPFL TWNG+Q R+NSWQDGV+GTNCPI
Sbjct: 45  KQVIVINDMFPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPI 104

Query: 291 LPGRNWTYSFQMKDQIGSFFYFPSLLLQKAAGGYGAXXXXXXXXXXXPFSTPYKEFDILI 112
           LPG NWTY FQ+KDQIGS+FYFP+LLLQKAAGGYGA           PF  P +E+DILI
Sbjct: 105 LPGTNWTYRFQVKDQIGSYFYFPTLLLQKAAGGYGAIRIYPPELVPVPFPKPDEEYDILI 164

Query: 111 GDWFISDYQDMRSSLDRGIPLPSQPDGILINGLGP 7
           GDWF  D+  MR+SLD G  LP+ PDGIL NG GP
Sbjct: 165 GDWFYLDHTVMRASLDAGHSLPN-PDGILFNGRGP 198


>gb|AAM67203.1| pectinesterase, putative [Arabidopsis thaliana]
          Length = 545

 Score =  193 bits (490), Expect = 1e-47
 Identities = 97/155 (62%), Positives = 108/155 (69%)
 Frame = -3

Query: 471 KQVIVINDQFPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPI 292
           KQVIVIND FPGP                 L EPFL TWNG+Q R+NSWQDGV+GTNCPI
Sbjct: 45  KQVIVINDMFPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPI 104

Query: 291 LPGRNWTYSFQMKDQIGSFFYFPSLLLQKAAGGYGAXXXXXXXXXXXPFSTPYKEFDILI 112
           LPG NWTY FQ+KDQIGS+FYFP+LLLQKAAGGYGA           PF  P +E+DILI
Sbjct: 105 LPGTNWTYRFQVKDQIGSYFYFPTLLLQKAAGGYGAIRIYPPELVPVPFPKPDEEYDILI 164

Query: 111 GDWFISDYQDMRSSLDRGIPLPSQPDGILINGLGP 7
           GDWF  D+  MR+SLD G  LP+ PDGIL NG GP
Sbjct: 165 GDWFYLDHTVMRASLDAGHSLPN-PDGILFNGRGP 198


>ref|NP_177707.1| SKU5 similar 18 protein [Arabidopsis thaliana]
           gi|91806095|gb|ABE65776.1| multi-copper oxidase type I
           family protein [Arabidopsis thaliana]
           gi|332197638|gb|AEE35759.1| SKU5 similar 18 protein
           [Arabidopsis thaliana]
          Length = 545

 Score =  193 bits (490), Expect = 1e-47
 Identities = 97/155 (62%), Positives = 108/155 (69%)
 Frame = -3

Query: 471 KQVIVINDQFPGPXXXXXXXXXXXXXXXXXLTEPFLFTWNGVQQRRNSWQDGVQGTNCPI 292
           KQVIVIND FPGP                 L EPFL TWNG+Q R+NSWQDGV+GTNCPI
Sbjct: 45  KQVIVINDMFPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPI 104

Query: 291 LPGRNWTYSFQMKDQIGSFFYFPSLLLQKAAGGYGAXXXXXXXXXXXPFSTPYKEFDILI 112
           LPG NWTY FQ+KDQIGS+FYFP+LLLQKAAGGYGA           PF  P +E+DILI
Sbjct: 105 LPGTNWTYRFQVKDQIGSYFYFPTLLLQKAAGGYGAIRIYPPELVPVPFPKPDEEYDILI 164

Query: 111 GDWFISDYQDMRSSLDRGIPLPSQPDGILINGLGP 7
           GDWF  D+  MR+SLD G  LP+ PDGIL NG GP
Sbjct: 165 GDWFYLDHTVMRASLDAGHSLPN-PDGILFNGRGP 198


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