BLASTX nr result

ID: Coptis21_contig00021399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021399
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 6...    87   1e-15
emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]    87   1e-15
ref|XP_004147826.1| PREDICTED: U-box domain-containing protein 6...    67   1e-09
gb|AFK49229.1| unknown [Medicago truncatula]                           67   2e-09
ref|XP_003522509.1| PREDICTED: U-box domain-containing protein 6...    62   6e-08

>ref|XP_002275253.1| PREDICTED: U-box domain-containing protein 62-like [Vitis vinifera]
          Length = 441

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/65 (64%), Positives = 51/65 (78%)
 Frame = +1

Query: 1   ENGLNSQLVFQDETLQFNCGASPQRRIVENGRKGREMSGFVTEKMFSIEGERYFGAQSSE 180
           ENGLNSQLVFQDE L+FNCGA PQRR+ + G K RE+S F+ EKMF +E +RYF  Q  E
Sbjct: 15  ENGLNSQLVFQDEALRFNCGA-PQRRVGDPGPKTRELSSFIDEKMFCVERDRYFHPQGGE 73

Query: 181 FRRNM 195
           FRR++
Sbjct: 74  FRRSI 78


>emb|CAN61689.1| hypothetical protein VITISV_024206 [Vitis vinifera]
          Length = 452

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/65 (64%), Positives = 51/65 (78%)
 Frame = +1

Query: 1   ENGLNSQLVFQDETLQFNCGASPQRRIVENGRKGREMSGFVTEKMFSIEGERYFGAQSSE 180
           ENGLNSQLVFQDE L+FNCGA PQRR+ + G K RE+S F+ EKMF +E +RYF  Q  E
Sbjct: 15  ENGLNSQLVFQDEALRFNCGA-PQRRVGDPGPKTRELSSFIDEKMFCVERDRYFHPQGGE 73

Query: 181 FRRNM 195
           FRR++
Sbjct: 74  FRRSI 78


>ref|XP_004147826.1| PREDICTED: U-box domain-containing protein 62-like [Cucumis
           sativus] gi|449476988|ref|XP_004154895.1| PREDICTED:
           U-box domain-containing protein 62-like [Cucumis
           sativus]
          Length = 429

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = +1

Query: 4   NGLNSQLVFQDETLQFNCGASPQRRIVENGRKGREMSGFVTEKMFSI-EGERYFGAQSSE 180
           NGL+S LVFQ+E+L FNC ++P RR+ +   K RE+ GF+ +K+F I + +R+F  Q  +
Sbjct: 7   NGLDSHLVFQNESLPFNCSSTPHRRLPDPPPKTRELCGFMDDKLFPIVDRDRFFSQQGED 66

Query: 181 FRRNM 195
           FRRN+
Sbjct: 67  FRRNV 71


>gb|AFK49229.1| unknown [Medicago truncatula]
          Length = 432

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = +1

Query: 1   ENGLNSQLVFQDETLQFNCGASPQRRIVENGRKGREMSGFVTEKMFSIEGERYFGAQSSE 180
           ENGL S LVF D +L+FNCG +P R++   G    +  GF+ +KMF++  +++F +Q +E
Sbjct: 15  ENGLTSPLVFPDHSLRFNCGGAPPRQV---GDPVPKTGGFIDDKMFTVNRDQFFPSQGTE 71

Query: 181 FRRNMNVFEDSG 216
           FRR  NVF D G
Sbjct: 72  FRR--NVFSDRG 81


>ref|XP_003522509.1| PREDICTED: U-box domain-containing protein 62-like [Glycine max]
          Length = 426

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = +1

Query: 1   ENGLNSQLVFQDETLQFNCGASPQRRIVENGRKGREMSGFVTEKMFSIEGERYF-GAQSS 177
           ENGLNS LVFQD+ L+FNC    QRR+ +   K RE+  F+ +    I+ +R+F  AQ+ 
Sbjct: 15  ENGLNSPLVFQDDPLRFNCPTPHQRRVGDPPPKTRELGAFIDDNKMFIDRDRFFAAAQNP 74

Query: 178 EFRR 189
           EFRR
Sbjct: 75  EFRR 78


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