BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021395
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]              358   3e-97
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     358   3e-97
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...   350   1e-94
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                         348   3e-94
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]        345   5e-93

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  358 bits (920), Expect = 3e-97
 Identities = 171/200 (85%), Positives = 188/200 (94%)
 Frame = +1

Query: 1   LLDRLSAGENRAEKTGVLAELIKKTNAQEMKWIVMIILKDLKLGTSEKSIFHEYHPDAED 180
           LLD L++ ENR EKT VL+ LIKKTNAQEMKWIVMIILKDLKLG SEKSIFHE+HPDAED
Sbjct: 132 LLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIFHEFHPDAED 191

Query: 181 LFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLALRISDAAAAWKKLHGKEVVVEC 360
           LFNVTCDLKLVCEKL+DRS+RHKRQDIE+GKAVRPQLA+R++DA AAWKKLHGKEVVVEC
Sbjct: 192 LFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKLHGKEVVVEC 251

Query: 361 KFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKENILVDRCILDGEMLVWDTSTN 540
           KFDGDRIQIHK+G EIHFFSRNFLDHPEY++AMSNI+ +N+LVDRCILDGEMLVWD S N
Sbjct: 252 KFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILDGEMLVWDISLN 311

Query: 541 RFAEFGSNQEIAKAAKQGFD 600
           RFAEFGSNQEIAKAAK+G D
Sbjct: 312 RFAEFGSNQEIAKAAKEGLD 331


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  358 bits (920), Expect = 3e-97
 Identities = 171/200 (85%), Positives = 188/200 (94%)
 Frame = +1

Query: 1   LLDRLSAGENRAEKTGVLAELIKKTNAQEMKWIVMIILKDLKLGTSEKSIFHEYHPDAED 180
           LLD L++ ENR EKT VL+ LIKKTNAQEMKWIVMIILKDLKLG SEKSIFHE+HPDAED
Sbjct: 132 LLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIFHEFHPDAED 191

Query: 181 LFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLALRISDAAAAWKKLHGKEVVVEC 360
           LFNVTCDLKLVCEKL+DRS+RHKRQDIE+GKAVRPQLA+R++DA AAWKKLHGKEVVVEC
Sbjct: 192 LFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKLHGKEVVVEC 251

Query: 361 KFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKENILVDRCILDGEMLVWDTSTN 540
           KFDGDRIQIHK+G EIHFFSRNFLDHPEY++AMSNI+ +N+LVDRCILDGEMLVWD S N
Sbjct: 252 KFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILDGEMLVWDISLN 311

Query: 541 RFAEFGSNQEIAKAAKQGFD 600
           RFAEFGSNQEIAKAAK+G D
Sbjct: 312 RFAEFGSNQEIAKAAKEGLD 331


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
           predicted protein [Populus trichocarpa]
          Length = 1242

 Score =  350 bits (897), Expect = 1e-94
 Identities = 165/200 (82%), Positives = 184/200 (92%)
 Frame = +1

Query: 1   LLDRLSAGENRAEKTGVLAELIKKTNAQEMKWIVMIILKDLKLGTSEKSIFHEYHPDAED 180
           LLD+L++ ENR EKT VLA LI KTN QEMKWI+MIILKDLKLG SEKS+FHE+HPDAED
Sbjct: 141 LLDKLASSENRGEKTAVLAALINKTNTQEMKWIIMIILKDLKLGMSEKSVFHEFHPDAED 200

Query: 181 LFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLALRISDAAAAWKKLHGKEVVVEC 360
           LFNVTCDLKLVCEKLRDR++RHKRQDIE+GKAVRPQLA+R+SDA AAWKKLHGKEVVVEC
Sbjct: 201 LFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWKKLHGKEVVVEC 260

Query: 361 KFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKENILVDRCILDGEMLVWDTSTN 540
           KFDGDRIQIHK+GAE+H+FSRNFLDH EY H MS+II +N+L +RCILDGEMLVWDTS N
Sbjct: 261 KFDGDRIQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQNVLDERCILDGEMLVWDTSLN 320

Query: 541 RFAEFGSNQEIAKAAKQGFD 600
           RFAEFGSNQEIAKAA+ G D
Sbjct: 321 RFAEFGSNQEIAKAARDGLD 340


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score =  348 bits (894), Expect = 3e-94
 Identities = 164/200 (82%), Positives = 184/200 (92%)
 Frame = +1

Query: 1   LLDRLSAGENRAEKTGVLAELIKKTNAQEMKWIVMIILKDLKLGTSEKSIFHEYHPDAED 180
           LLD+L++ ENR +KT VLA LI KTN QEMKWI+MIILKDLKLG SEKS+FHE+HPDAED
Sbjct: 141 LLDKLASSENRGDKTAVLAALINKTNTQEMKWIIMIILKDLKLGMSEKSVFHEFHPDAED 200

Query: 181 LFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLALRISDAAAAWKKLHGKEVVVEC 360
           LFNVTCDLKLVCEKLRDR++RHKRQDIE+GKAVRPQLA+R+SDA AAWKKLHGKEVVVEC
Sbjct: 201 LFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWKKLHGKEVVVEC 260

Query: 361 KFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKENILVDRCILDGEMLVWDTSTN 540
           KFDGDRIQIHK+GAE+H+FSRNFLDH EY H MS+II +N+L +RCILDGEMLVWDTS N
Sbjct: 261 KFDGDRIQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQNVLDERCILDGEMLVWDTSLN 320

Query: 541 RFAEFGSNQEIAKAAKQGFD 600
           RFAEFGSNQEIAKAA+ G D
Sbjct: 321 RFAEFGSNQEIAKAARDGLD 340


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
          Length = 1171

 Score =  345 bits (884), Expect = 5e-93
 Identities = 165/200 (82%), Positives = 183/200 (91%)
 Frame = +1

Query: 1   LLDRLSAGENRAEKTGVLAELIKKTNAQEMKWIVMIILKDLKLGTSEKSIFHEYHPDAED 180
           LLDRL++ ENRAEK  VL+ LI+KTNAQEMKWI+MIILKDLKLG SEKSIFHE+HPDAED
Sbjct: 132 LLDRLASAENRAEKILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAED 191

Query: 181 LFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLALRISDAAAAWKKLHGKEVVVEC 360
           LFNVTCDLKLVCEKLRDR++RHKRQDIE+GKAVRPQLA R+++A  AWKKLHGK+VVVEC
Sbjct: 192 LFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAWKKLHGKDVVVEC 251

Query: 361 KFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKENILVDRCILDGEMLVWDTSTN 540
           KFDGDRIQIHK+G EIHFFSRNF+DH EY HAMS II +N+LVDRCILDGEMLVWDTS  
Sbjct: 252 KFDGDRIQIHKNGTEIHFFSRNFIDHSEYAHAMSEIIIQNVLVDRCILDGEMLVWDTSLK 311

Query: 541 RFAEFGSNQEIAKAAKQGFD 600
           RFAEFGSNQEIAKAA+ G D
Sbjct: 312 RFAEFGSNQEIAKAARDGLD 331