BLASTX nr result

ID: Coptis21_contig00021389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021389
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276560.1| PREDICTED: uncharacterized protein LOC100243...   171   8e-41
emb|CAO91858.1| putative lysine decarbxylase [Nicotiana tabacum]      162   3e-38
ref|XP_002529033.1| carboxy-lyase, putative [Ricinus communis] g...   161   6e-38
ref|XP_002311733.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|XP_004151464.1| PREDICTED: probable cytokinin riboside 5'-mo...   154   1e-35

>ref|XP_002276560.1| PREDICTED: uncharacterized protein LOC100243479 [Vitis vinifera]
           gi|297737525|emb|CBI26726.3| unnamed protein product
           [Vitis vinifera]
          Length = 310

 Score =  171 bits (433), Expect = 8e-41
 Identities = 87/137 (63%), Positives = 103/137 (75%), Gaps = 14/137 (10%)
 Frame = -1

Query: 370 LNNSHQK-------NSMKKMDKLTSKFKFLKP----RVFMCKSEF---EERTSPDEVKKE 233
           L NSHQ+       +  ++   L+ KF  LKP    R+ +CK EF   EERTSP+EV+KE
Sbjct: 11  LRNSHQRTVRFAPFSGGERRQTLSFKFSELKPHNPWRILVCKGEFVEFEERTSPNEVRKE 70

Query: 232 IQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDCTTWTGVGPGLMDAA 53
           I+ CY LI+KLGRGVVYLGSSRMGP H HY+Q +EL RE+ NLLDCT+WTG GPGLMDAA
Sbjct: 71  IEQCYELINKLGRGVVYLGSSRMGPDHSHYLQALELGREVANLLDCTSWTGAGPGLMDAA 130

Query: 52  TKGALQAKKPVGGFKIG 2
           +KGALQA KPVGGFKIG
Sbjct: 131 SKGALQAGKPVGGFKIG 147


>emb|CAO91858.1| putative lysine decarbxylase [Nicotiana tabacum]
          Length = 305

 Score =  162 bits (411), Expect = 3e-38
 Identities = 86/135 (63%), Positives = 97/135 (71%), Gaps = 12/135 (8%)
 Frame = -1

Query: 370 LNNSHQKNSM--KKMDKLTSKFKFLKPRV-------FMCKSE---FEERTSPDEVKKEIQ 227
           L +SHQK  M    + K T +F    P++       F CKSE   FEERTSP EVKKEI 
Sbjct: 18  LRSSHQKEVMLGSCLRKETWRFNLNLPKLNYQSRNSFCCKSESIDFEERTSPYEVKKEID 77

Query: 226 NCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDCTTWTGVGPGLMDAATK 47
            CY LIH+LGRG VYLGSSRMGP HPHY++T EL  +I  LLDCTTW+G GPGLMDAAT+
Sbjct: 78  QCYELIHRLGRGAVYLGSSRMGPEHPHYIKTFELGSKIATLLDCTTWSGAGPGLMDAATQ 137

Query: 46  GALQAKKPVGGFKIG 2
           GALQA KPVGGFKIG
Sbjct: 138 GALQAGKPVGGFKIG 152


>ref|XP_002529033.1| carboxy-lyase, putative [Ricinus communis]
           gi|223531513|gb|EEF33344.1| carboxy-lyase, putative
           [Ricinus communis]
          Length = 302

 Score =  161 bits (408), Expect = 6e-38
 Identities = 76/108 (70%), Positives = 88/108 (81%), Gaps = 3/108 (2%)
 Frame = -1

Query: 319 SKFKFLKPRVFMCKSE---FEERTSPDEVKKEIQNCYALIHKLGRGVVYLGSSRMGPGHP 149
           SK K    R+ +CKSE   FEERTSP+E++KEI+ CY LIH+LGRGVVYLGSSRMGP HP
Sbjct: 43  SKSKPFPKRISLCKSELVDFEERTSPNEIRKEIERCYELIHRLGRGVVYLGSSRMGPDHP 102

Query: 148 HYMQTVELAREIGNLLDCTTWTGVGPGLMDAATKGALQAKKPVGGFKI 5
           HY+Q +EL+RE+  LLDCT+W G GPGLMDA  KGALQA KPVGGFKI
Sbjct: 103 HYLQALELSREVAKLLDCTSWMGAGPGLMDATIKGALQAGKPVGGFKI 150


>ref|XP_002311733.1| predicted protein [Populus trichocarpa] gi|222851553|gb|EEE89100.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  155 bits (393), Expect = 4e-36
 Identities = 70/90 (77%), Positives = 79/90 (87%)
 Frame = -1

Query: 274 EFEERTSPDEVKKEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDC 95
           +F+ERTSP E++KEI  CY LIH+LGRGVVYLGSSRMGP HPHY Q +EL RE+ NLLDC
Sbjct: 1   DFDERTSPTEIRKEIGRCYELIHRLGRGVVYLGSSRMGPDHPHYSQALELGREVANLLDC 60

Query: 94  TTWTGVGPGLMDAATKGALQAKKPVGGFKI 5
           T+WTG GPGLMDAATKGAL+A KPVGGFKI
Sbjct: 61  TSWTGAGPGLMDAATKGALEAGKPVGGFKI 90


>ref|XP_004151464.1| PREDICTED: probable cytokinin riboside 5'-monophosphate
           phosphoribohydrolase LOGL9-like [Cucumis sativus]
           gi|449524603|ref|XP_004169311.1| PREDICTED: probable
           cytokinin riboside 5'-monophosphate phosphoribohydrolase
           LOGL9-like [Cucumis sativus]
          Length = 298

 Score =  154 bits (389), Expect = 1e-35
 Identities = 86/149 (57%), Positives = 99/149 (66%), Gaps = 11/149 (7%)
 Frame = -1

Query: 415 MGVSLFNFTGWSAIQLNNSHQKNSMKKMDKLTSK---FKFLKP-----RVFMCK---SEF 269
           M  S+   +G   I + NSHQK    ++     K   FKF K      R  + K   +EF
Sbjct: 1   MSFSMMGSSGCE-ILIRNSHQKTVKLQLFHEKEKQMVFKFSKSGCNPARALLSKHEATEF 59

Query: 268 EERTSPDEVKKEIQNCYALIHKLGRGVVYLGSSRMGPGHPHYMQTVELAREIGNLLDCTT 89
           EERTSP EV+ EI  CY LI++LG+GVVYLGSSRMGP H HY Q  EL+REI  LLDCTT
Sbjct: 60  EERTSPIEVRTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTT 119

Query: 88  WTGVGPGLMDAATKGALQAKKPVGGFKIG 2
           W+GVGPGLMDA TKGALQA  PVGGFKIG
Sbjct: 120 WSGVGPGLMDAVTKGALQAGNPVGGFKIG 148


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