BLASTX nr result
ID: Coptis21_contig00021380
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00021380 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24552.3| unnamed protein product [Vitis vinifera] 118 4e-25 ref|XP_002510927.1| mitochondrial intermediate peptidase, putati... 118 4e-25 ref|XP_002265587.1| PREDICTED: mitochondrial intermediate peptid... 118 4e-25 ref|XP_002864117.1| predicted protein [Arabidopsis lyrata subsp.... 115 5e-24 ref|NP_199967.2| mitochondrial intermediate peptidase [Arabidops... 114 6e-24 >emb|CBI24552.3| unnamed protein product [Vitis vinifera] Length = 551 Score = 118 bits (296), Expect = 4e-25 Identities = 59/88 (67%), Positives = 73/88 (82%) Frame = -1 Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85 EKGF+ITT+ TLSS+LQW SD EVRK +YI+GNS PHANL +LDKLI ARHE+AQIMG Sbjct: 309 EKGFRITTEPGTLSSILQWASDAEVRKMAYIQGNSVPHANLAVLDKLIAARHEIAQIMGY 368 Query: 84 NSFADFSMHHRTLASSPDVVMSFLLELS 1 S+A+F++ +ASSP+VVMSFL E+S Sbjct: 369 KSYAEFAV-RPNMASSPEVVMSFLFEMS 395 >ref|XP_002510927.1| mitochondrial intermediate peptidase, putative [Ricinus communis] gi|223550042|gb|EEF51529.1| mitochondrial intermediate peptidase, putative [Ricinus communis] Length = 718 Score = 118 bits (296), Expect = 4e-25 Identities = 64/88 (72%), Positives = 70/88 (79%) Frame = -1 Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85 EKGFQITTD TL SVLQW SDDEVRK +YIKGNS PHAN+ +LDKLI ARHELAQIMG Sbjct: 231 EKGFQITTDPRTLVSVLQWASDDEVRKIAYIKGNSVPHANIKVLDKLIAARHELAQIMGY 290 Query: 84 NSFADFSMHHRTLASSPDVVMSFLLELS 1 S+A+F M LASSP VV SFL E+S Sbjct: 291 KSYAEF-MVKPNLASSPKVVTSFLNEMS 317 >ref|XP_002265587.1| PREDICTED: mitochondrial intermediate peptidase [Vitis vinifera] Length = 771 Score = 118 bits (296), Expect = 4e-25 Identities = 59/88 (67%), Positives = 73/88 (82%) Frame = -1 Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85 EKGF+ITT+ TLSS+LQW SD EVRK +YI+GNS PHANL +LDKLI ARHE+AQIMG Sbjct: 289 EKGFRITTEPGTLSSILQWASDAEVRKMAYIQGNSVPHANLAVLDKLIAARHEIAQIMGY 348 Query: 84 NSFADFSMHHRTLASSPDVVMSFLLELS 1 S+A+F++ +ASSP+VVMSFL E+S Sbjct: 349 KSYAEFAV-RPNMASSPEVVMSFLFEMS 375 >ref|XP_002864117.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297309952|gb|EFH40376.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 706 Score = 115 bits (287), Expect = 5e-24 Identities = 59/88 (67%), Positives = 69/88 (78%) Frame = -1 Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85 +KGF+I TD TLSS+LQW SD+EVRK YI+GNS PHAN +L+KLI ARHEL+Q+MGC Sbjct: 234 QKGFRINTDPRTLSSILQWTSDEEVRKMVYIQGNSVPHANHRVLEKLITARHELSQMMGC 293 Query: 84 NSFADFSMHHRTLASSPDVVMSFLLELS 1 NS+ADF M LA SP VV SFL ELS Sbjct: 294 NSYADF-MVEPNLAKSPKVVTSFLQELS 320 >ref|NP_199967.2| mitochondrial intermediate peptidase [Arabidopsis thaliana] gi|332008712|gb|AED96095.1| mitochondrial intermediate peptidase [Arabidopsis thaliana] Length = 706 Score = 114 bits (286), Expect = 6e-24 Identities = 58/88 (65%), Positives = 69/88 (78%) Frame = -1 Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85 +KGF+I TD T+SS+LQW SD+EVRK YI+GNS PHAN G+L+KLI ARHEL+Q+MGC Sbjct: 234 QKGFRINTDPRTVSSILQWTSDEEVRKMVYIQGNSVPHANHGVLEKLIAARHELSQMMGC 293 Query: 84 NSFADFSMHHRTLASSPDVVMSFLLELS 1 NS+AD M LA SP VV SFL ELS Sbjct: 294 NSYADI-MVEPNLAKSPKVVTSFLQELS 320