BLASTX nr result

ID: Coptis21_contig00021380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021380
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24552.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002510927.1| mitochondrial intermediate peptidase, putati...   118   4e-25
ref|XP_002265587.1| PREDICTED: mitochondrial intermediate peptid...   118   4e-25
ref|XP_002864117.1| predicted protein [Arabidopsis lyrata subsp....   115   5e-24
ref|NP_199967.2| mitochondrial intermediate peptidase [Arabidops...   114   6e-24

>emb|CBI24552.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/88 (67%), Positives = 73/88 (82%)
 Frame = -1

Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85
           EKGF+ITT+  TLSS+LQW SD EVRK +YI+GNS PHANL +LDKLI ARHE+AQIMG 
Sbjct: 309 EKGFRITTEPGTLSSILQWASDAEVRKMAYIQGNSVPHANLAVLDKLIAARHEIAQIMGY 368

Query: 84  NSFADFSMHHRTLASSPDVVMSFLLELS 1
            S+A+F++    +ASSP+VVMSFL E+S
Sbjct: 369 KSYAEFAV-RPNMASSPEVVMSFLFEMS 395


>ref|XP_002510927.1| mitochondrial intermediate peptidase, putative [Ricinus communis]
           gi|223550042|gb|EEF51529.1| mitochondrial intermediate
           peptidase, putative [Ricinus communis]
          Length = 718

 Score =  118 bits (296), Expect = 4e-25
 Identities = 64/88 (72%), Positives = 70/88 (79%)
 Frame = -1

Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85
           EKGFQITTD  TL SVLQW SDDEVRK +YIKGNS PHAN+ +LDKLI ARHELAQIMG 
Sbjct: 231 EKGFQITTDPRTLVSVLQWASDDEVRKIAYIKGNSVPHANIKVLDKLIAARHELAQIMGY 290

Query: 84  NSFADFSMHHRTLASSPDVVMSFLLELS 1
            S+A+F M    LASSP VV SFL E+S
Sbjct: 291 KSYAEF-MVKPNLASSPKVVTSFLNEMS 317


>ref|XP_002265587.1| PREDICTED: mitochondrial intermediate peptidase [Vitis vinifera]
          Length = 771

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/88 (67%), Positives = 73/88 (82%)
 Frame = -1

Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85
           EKGF+ITT+  TLSS+LQW SD EVRK +YI+GNS PHANL +LDKLI ARHE+AQIMG 
Sbjct: 289 EKGFRITTEPGTLSSILQWASDAEVRKMAYIQGNSVPHANLAVLDKLIAARHEIAQIMGY 348

Query: 84  NSFADFSMHHRTLASSPDVVMSFLLELS 1
            S+A+F++    +ASSP+VVMSFL E+S
Sbjct: 349 KSYAEFAV-RPNMASSPEVVMSFLFEMS 375


>ref|XP_002864117.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309952|gb|EFH40376.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 706

 Score =  115 bits (287), Expect = 5e-24
 Identities = 59/88 (67%), Positives = 69/88 (78%)
 Frame = -1

Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85
           +KGF+I TD  TLSS+LQW SD+EVRK  YI+GNS PHAN  +L+KLI ARHEL+Q+MGC
Sbjct: 234 QKGFRINTDPRTLSSILQWTSDEEVRKMVYIQGNSVPHANHRVLEKLITARHELSQMMGC 293

Query: 84  NSFADFSMHHRTLASSPDVVMSFLLELS 1
           NS+ADF M    LA SP VV SFL ELS
Sbjct: 294 NSYADF-MVEPNLAKSPKVVTSFLQELS 320


>ref|NP_199967.2| mitochondrial intermediate peptidase [Arabidopsis thaliana]
           gi|332008712|gb|AED96095.1| mitochondrial intermediate
           peptidase [Arabidopsis thaliana]
          Length = 706

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/88 (65%), Positives = 69/88 (78%)
 Frame = -1

Query: 264 EKGFQITTDSITLSSVLQWVSDDEVRKQSYIKGNSSPHANLGILDKLIEARHELAQIMGC 85
           +KGF+I TD  T+SS+LQW SD+EVRK  YI+GNS PHAN G+L+KLI ARHEL+Q+MGC
Sbjct: 234 QKGFRINTDPRTVSSILQWTSDEEVRKMVYIQGNSVPHANHGVLEKLIAARHELSQMMGC 293

Query: 84  NSFADFSMHHRTLASSPDVVMSFLLELS 1
           NS+AD  M    LA SP VV SFL ELS
Sbjct: 294 NSYADI-MVEPNLAKSPKVVTSFLQELS 320


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