BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021370
         (1649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15337.3| unnamed protein product [Vitis vinifera]              158   5e-36
emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]   154   5e-35
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-29
ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|35548...    91   9e-16
ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|35548...    90   2e-15

>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  158 bits (399), Expect = 5e-36
 Identities = 126/399 (31%), Positives = 196/399 (49%), Gaps = 10/399 (2%)
 Frame = +1

Query: 22   DGEARETIGVSSSEVIPSLLPEIVSDILSRLPIEDIMRSKTVCKEWYAFTKDPHFINLHL 201
            DG A  T        +  LLPE++S+ILSRLPIE I+R ++VCK W +  + P FINL  
Sbjct: 139  DGRASTT---KKDGPVNDLLPELISEILSRLPIELILRCRSVCKTWNSVIQSPLFINLQA 195

Query: 202  SRALCLPRRIIVEP-RGEVPIT---SLYLIETTDGMWRGREIPVSCAQGNYLYTLAYCHG 369
             ++   P R+I++P  G V  T   SL+L++T +   + R I     + + L  ++ C+G
Sbjct: 196  RKSHNQPSRVILKPIFGGVTATTMHSLFLLDTEER--KSRRIHDKSWRFSGLQIMSSCNG 253

Query: 370  LICGASSFCKMGPLFIYNPITREYVELPETDIEAEPDKLSVSLGFGFDSIGKKYKVVRFF 549
            L+C  +S  ++GP++I NPITRE+V LP    E     L   +G GFDS   KY VVR  
Sbjct: 254  LLC-ITSDSELGPVYISNPITREFVILPSP--ETGFSLLRHQVGLGFDSSNGKYIVVR-- 308

Query: 550  KLYDDDLQTHM-KGEIITLGEGSWRGLEVPETVICGTRRKPVFLDETLYWITEKNSXXXX 726
              Y D  ++ + K E I LGE SWR L VP+ +   T    VF +  L+W  +K      
Sbjct: 309  -AYTDKSKSQVNKFEAIMLGENSWRSLTVPDIIAECTINGSVFWNGALHWKIKKK--PGR 365

Query: 727  XXXXXXXXSTEKFRTVKFPSSLIRSINIPDKXXXXXXXXXXXXVEHGYRHCFRVWRIVRS 906
                    S+ KF   +FP     S ++PD             V+  Y    ++WR+   
Sbjct: 366  ECMLSFDVSSGKFAVTRFPV----SADVPDDFEMVELDGHLSLVQ-VYDTQMKIWRVTGE 420

Query: 907  NTKKGYKFYESFHSMTVTYDVVGWSMKVMEKWIDNTFLFHLK-----GALFRSKIDMKDH 1071
              +     YE  + M V ++   ++ +++  +ID  +L  +      G  +R       +
Sbjct: 421  KIEGLSVCYEDMYCMNVRWN-SSFNCEIIRGYIDEGYLLQVNTHRGPGGAWRR------Y 473

Query: 1072 LSLYFPEKDEFQIVEVLRIPELFEPTLFVPCLVSPCSAH 1188
            L+ YFP+ ++F  + +  IP  F+   F P L+SP   H
Sbjct: 474  LTQYFPKMEQFLSLIIPSIPICFKTISFRPTLISPMQLH 512


>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score =  154 bits (390), Expect = 5e-35
 Identities = 116/389 (29%), Positives = 184/389 (47%), Gaps = 4/389 (1%)
 Frame = +1

Query: 22   DGEARETIGVSSSEVIPSLLPEIVSDILSRLPIEDIMRSKTVCKEWYAFTKDPHFINLHL 201
            DG  R T  + +   + +L  +I++DILS LPIEDI+R ++VCK WY  TKD +F  L  
Sbjct: 3    DGSGRRT-SLRTGGGLLNLPLDIMADILSLLPIEDILRCRSVCKTWYGLTKDSYFFKLQF 61

Query: 202  SRALCLPRRIIVEPRGEVPITSLYLIETTDGMWRGREIPVSCAQGNYLYTLAYCHGLICG 381
             R      R++   + E    S++L++      + REI +    G  L  ++ C+GL+C 
Sbjct: 62   RRTFYHMPRLMFISKSE---NSVFLLD--GKQCKAREIALPTVLGRNLIVMSSCNGLLCL 116

Query: 382  ASSFCKMGPLFIYNPITREYVELPETDIEAEPDKLSVSLGFGFDSIGKKYKVVRFFKLYD 561
            AS      P+ I NPITR+Y+ LPE+ + A    + + +G G+D    KYKVVR +    
Sbjct: 117  ASEE-SPNPVIISNPITRKYIVLPES-VNASYSFIQL-VGLGYDPWNMKYKVVRSY---- 169

Query: 562  DDLQTHMKGEIITLGEGSWRGLEVPETVICGTRRKPVFLDETLYWITEKN-SXXXXXXXX 738
             D     + EIITLGE SWR L+VP  V+CG   +P++ +  LYWI +K           
Sbjct: 170  IDNSKFTRFEIITLGEASWRQLDVPCRVVCGRNSRPIYCEGALYWILDKKFHYDGDGCIL 229

Query: 739  XXXXSTEKFRTVKFPSSLIRSINIP---DKXXXXXXXXXXXXVEHGYRHCFRVWRIVRSN 909
                  EKF  +  P ++      P   +             V         +W+++R N
Sbjct: 230  AFDLREEKFGMIALPPNIRMPTGNPGLYNGSLHLLNVAGCLTVIADECQFLHIWQVMR-N 288

Query: 910  TKKGYKFYESFHSMTVTYDVVGWSMKVMEKWIDNTFLFHLKGALFRSKIDMKDHLSLYFP 1089
              +G+        M   + V  +S  V+  W  ++ L  +      S+ D+ +    YFP
Sbjct: 289  RDRGFSVRYRRSDMHCRWSV--FSQPVLLDWCKDSLLLSVSKFGVYSERDLVE----YFP 342

Query: 1090 EKDEFQIVEVLRIPELFEPTLFVPCLVSP 1176
            E+ ++    +  +P+ F    F P L+SP
Sbjct: 343  ERKQYAGHHIRGLPKWFRSCSFKPNLISP 371


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  135 bits (339), Expect = 4e-29
 Identities = 116/378 (30%), Positives = 176/378 (46%), Gaps = 11/378 (2%)
 Frame = +1

Query: 76   LLPEIVSDILSRLPIEDIMRSKTVCKEWYAFTKDPHFINLHLSRALCLPRRIIVEPRGEV 255
            L PE+  ++L+RLP+E I+R ++VCK W    + P+FI+L L      P R IV+ + E 
Sbjct: 21   LPPEMFCEVLARLPVESILRFRSVCKSWCRMIQSPYFISLQLGVTKNKPCRFIVQSQREG 80

Query: 256  PITSLYLIETTDGMWRGREI---PVSCA-----QGNYLYTLAYCHGLICGASSFCKMGPL 411
             ++SLYL++  D   + REI    + C      +   L    +C G +C AS   ++ P+
Sbjct: 81   DMSSLYLVDIED--LKAREIQLEKIKCRTRLKFKLPALGVRCFCDGFLCMASE-KRLDPV 137

Query: 412  FIYNPITREYVELPETDIEAEPDKLSVSLGFGFDSIGKKYKVVRFFKLYDDDLQTHM-KG 588
             I NPIT+E V LP +  +A    +   L FGFD    KYKV+R ++   +    H+ K 
Sbjct: 138  CICNPITKESVILPLSRSKAH--LVRHKLAFGFDQSSGKYKVIRDYRTSSN---KHLSKF 192

Query: 589  EIITLGEGSWRGLEVPETVICGTRRKPVFLDETLYWITEKNSXXXXXXXXXXXXSTEKFR 768
            +IITLGE SWR L  P+ +        VF + +L+WI +  +            S+E F 
Sbjct: 193  QIITLGESSWRQLNPPQNLCTSDWDAAVFWNGSLHWIIDDKT--IDEPILAFDLSSETFY 250

Query: 769  TVKFPSSLIRSINIPDKXXXXXXXXXXXXVEHGYRHCFRVWRIVRSNTKKGYKFYESFHS 948
            T+ F    +      +             VEH   H  ++W  V  N  KG  F  +   
Sbjct: 251  TIPFHRLCLSH----ECYELQVLGASLTIVEHN-SHMIKIWE-VAGNKVKG--FSANCRE 302

Query: 949  MTVTYDVVGWSMKVMEKWIDNTF--LFHLKGALFRSKIDMKDHLSLYFPEKDEFQIVEVL 1122
               TY  V W+  +  K I       F L+     +K   KD  + + PEK ++   ++L
Sbjct: 303  EHDTY--VCWNKYLFYKTISQLSHKSFMLQVCFIDNKNVKKDWFTRFVPEKAQYFHQDIL 360

Query: 1123 RIPELFEPTLFVPCLVSP 1176
             +PE F    F P  VSP
Sbjct: 361  GLPEHFNTDHFKPSFVSP 378


>ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|355487161|gb|AES68364.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 90.9 bits (224), Expect = 9e-16
 Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 14/264 (5%)
 Frame = +1

Query: 37  ETIGVSSSEVIPSLLP----EIVSDILSRLPIEDIMRSKTVCKEWYAFTKDPHFINLHLS 204
           +T+   S   +P  LP    E++ +ILSRLP++ +++ +  CK W +   +P F   HLS
Sbjct: 35  KTLTSPSLHALPLPLPFLPFELIEEILSRLPVKLLLQLRCACKSWSSLISNPKFAKKHLS 94

Query: 205 RALCLPRRIIVEPRGEV----PITSLYLIETTDGMWRGREIPVSCAQGNYLYTLAYCHGL 372
            +       I    G++    P+ S+Y   TT  + +       C+     Y +  C+G+
Sbjct: 95  MSTRHVLHCISSSGGDILKSYPLDSIYTNATTTAIPQLEYSFHRCSN----YFIGSCNGI 150

Query: 373 ICGASS--FCKMGPLFIYNPITREYVELPETDIEAEPDKLSVSLGFGFDSIGKKYKVVRF 546
           +C A+      +    ++NP  R++ ELP    +     +    GFG+D +   YKVV  
Sbjct: 151 LCLAAEGYHTNLVTFRLWNPFIRKFKELPPLGDQQTSAYIIKMYGFGYDPVSDNYKVVTV 210

Query: 547 FKLYDDDLQTHMKGE---IITLGEGSWRGLEV-PETVICGTRRKPVFLDETLYWITEKNS 714
            +++D      +K +   + TLG  SW+ + V P +V    R     +  T+ W+  K+S
Sbjct: 211 LRVFDYSSHILVKNDEVKVYTLGINSWKSISVFPYSVFPVQRLSGKCVSGTINWLASKDS 270

Query: 715 XXXXXXXXXXXXSTEKFRTVKFPS 786
                         E ++ V  P+
Sbjct: 271 KQSKYFILSLDLMNESYQEVSLPN 294


>ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|355487157|gb|AES68360.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 14/264 (5%)
 Frame = +1

Query: 37  ETIGVSSSEVIPSLLP----EIVSDILSRLPIEDIMRSKTVCKEWYAFTKDPHFINLHLS 204
           +T+   S   +P  LP    E++ +ILSRLP++ +++ +  CK W +   +P F   HLS
Sbjct: 35  KTLTSPSLHALPLPLPFLPFELIEEILSRLPVKLLLQLRCACKSWSSLISNPKFAKKHLS 94

Query: 205 RALCLPRRIIVEPRGEV----PITSLYLIETTDGMWRGREIPVSCAQGNYLYTLAYCHGL 372
            +       I    G++    P+ S+Y   TT  + +       C+     Y +  C+G+
Sbjct: 95  MSTRHVLHCISSSGGDILKSYPLDSIYTNATTTAIPQLEYSVHRCSN----YFIGSCNGI 150

Query: 373 ICGASS--FCKMGPLFIYNPITREYVELPETDIEAEPDKLSVSLGFGFDSIGKKYKVVRF 546
           +C A+      +    ++NP  R++ ELP    +     +    GFG+D +   YKVV  
Sbjct: 151 LCLAAEGYHTNLVTFRLWNPFIRKFKELPPLGDQQTSAYIIKMYGFGYDPVSDNYKVVTV 210

Query: 547 FKLYDDDLQTHMKGE---IITLGEGSWRGLEV-PETVICGTRRKPVFLDETLYWITEKNS 714
            +++D      +K +   + TLG  SW+ + V P +V    +     +  T+ W+  K+S
Sbjct: 211 LRVFDYSSHILVKSDEVKVYTLGINSWKSISVFPYSVFPVQQLSGKCVSGTINWLASKDS 270

Query: 715 XXXXXXXXXXXXSTEKFRTVKFPS 786
                         E ++ V  P+
Sbjct: 271 KQSKYFILSLDLMNESYQEVSLPN 294