BLASTX nr result

ID: Coptis21_contig00021355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021355
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37165.3| unnamed protein product [Vitis vinifera]              226   4e-57
ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263...   226   4e-57
emb|CBI23698.3| unnamed protein product [Vitis vinifera]              221   2e-55
ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257...   220   2e-55
emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]   220   2e-55

>emb|CBI37165.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score =  226 bits (576), Expect = 4e-57
 Identities = 122/239 (51%), Positives = 151/239 (63%), Gaps = 1/239 (0%)
 Frame = -2

Query: 724 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 545
           MDSD+GKLFVGGI ++T EE L+++F++YG+V  TVIMRD+ T RPRGFGFVVFADPSV+
Sbjct: 1   MDSDEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVL 60

Query: 544 DQALEENHVICSRTVEVKKAVPRGEQH-QHYHNSNQEQHSRGFGXXXXXXXXXXXXXXXX 368
           D  L+E H I  RTVE K+A+ R EQH     NSN  + S G                  
Sbjct: 61  DAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGM----------------- 103

Query: 367 XXXXXXXXXXXXXXXXXXXXXXXXGGNNTQFRSKKIFVGGLSASVTEEEFRGYFEKFGRI 188
                                   GGN   F++KKIFVGGL +++TEE FR YFE +G +
Sbjct: 104 ------------------------GGN---FKTKKIFVGGLPSTLTEEGFRQYFETYGHV 136

Query: 187 TDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQNNFHELNNKSVEVKRAVPKDAATNSG 11
           TDVVVMYD  T RPRGFGFI+FD+E+AV+ V+   FH+LN K VEVKRA+PKDA    G
Sbjct: 137 TDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEVKRALPKDANPGGG 195


>ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
          Length = 441

 Score =  226 bits (576), Expect = 4e-57
 Identities = 122/239 (51%), Positives = 151/239 (63%), Gaps = 1/239 (0%)
 Frame = -2

Query: 724 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 545
           MDSD+GKLFVGGI ++T EE L+++F++YG+V  TVIMRD+ T RPRGFGFVVFADPSV+
Sbjct: 1   MDSDEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVL 60

Query: 544 DQALEENHVICSRTVEVKKAVPRGEQH-QHYHNSNQEQHSRGFGXXXXXXXXXXXXXXXX 368
           D  L+E H I  RTVE K+A+ R EQH     NSN  + S G                  
Sbjct: 61  DAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGM----------------- 103

Query: 367 XXXXXXXXXXXXXXXXXXXXXXXXGGNNTQFRSKKIFVGGLSASVTEEEFRGYFEKFGRI 188
                                   GGN   F++KKIFVGGL +++TEE FR YFE +G +
Sbjct: 104 ------------------------GGN---FKTKKIFVGGLPSTLTEEGFRQYFETYGHV 136

Query: 187 TDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQNNFHELNNKSVEVKRAVPKDAATNSG 11
           TDVVVMYD  T RPRGFGFI+FD+E+AV+ V+   FH+LN K VEVKRA+PKDA    G
Sbjct: 137 TDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEVKRALPKDANPGGG 195


>emb|CBI23698.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  221 bits (562), Expect = 2e-55
 Identities = 117/243 (48%), Positives = 150/243 (61%), Gaps = 2/243 (0%)
 Frame = -2

Query: 724 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 545
           MDSDQGKLF+GGIS+ET E+ L+++F  YGEV   V+MRD+ T RPRGFGFVVFADPS++
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60

Query: 544 DQALEENHVICSRTVEVKKAVPRGEQH--QHYHNSNQEQHSRGFGXXXXXXXXXXXXXXX 371
           D+ L+E H+I  RTVE K+A+ R EQ       N N  ++S G                 
Sbjct: 61  DRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGG----------------- 103

Query: 370 XXXXXXXXXXXXXXXXXXXXXXXXXGGNNTQFRSKKIFVGGLSASVTEEEFRGYFEKFGR 191
                                    GGN    ++KKIFVGGL  +++EE FR YFE FG 
Sbjct: 104 -------------------------GGN---VKTKKIFVGGLPPTLSEEGFRQYFEAFGH 135

Query: 190 ITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQNNFHELNNKSVEVKRAVPKDAATNSG 11
           +TDVVVMYD +T RPRGFGF++FD+E+AV+ V+   FH+LN K VEVKRA+PKDA    G
Sbjct: 136 VTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALPKDANPGGG 195

Query: 10  RNH 2
             +
Sbjct: 196 SRY 198



 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
 Frame = -2

Query: 706 KLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVVDQALEE 527
           K+FVGG+     EE  R +F  +G V D V+M D+ T RPRGFGFV F     VD+ L +
Sbjct: 111 KIFVGGLPPTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYK 170

Query: 526 N-HVICSRTVEVKKAVPR------GEQHQHY 455
             H +  + VEVK+A+P+      G ++Q Y
Sbjct: 171 TFHDLNGKQVEVKRALPKDANPGGGSRYQGY 201


>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
          Length = 464

 Score =  220 bits (561), Expect = 2e-55
 Identities = 117/240 (48%), Positives = 149/240 (62%), Gaps = 2/240 (0%)
 Frame = -2

Query: 724 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 545
           MDSDQGKLF+GGIS+ET E+ L+++F  YGEV   V+MRD+ T RPRGFGFVVFADPS++
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60

Query: 544 DQALEENHVICSRTVEVKKAVPRGEQH--QHYHNSNQEQHSRGFGXXXXXXXXXXXXXXX 371
           D+ L+E H+I  RTVE K+A+ R EQ       N N  ++S G                 
Sbjct: 61  DRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGG----------------- 103

Query: 370 XXXXXXXXXXXXXXXXXXXXXXXXXGGNNTQFRSKKIFVGGLSASVTEEEFRGYFEKFGR 191
                                    GGN    ++KKIFVGGL  +++EE FR YFE FG 
Sbjct: 104 -------------------------GGN---VKTKKIFVGGLPPTLSEEGFRQYFEAFGH 135

Query: 190 ITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQNNFHELNNKSVEVKRAVPKDAATNSG 11
           +TDVVVMYD +T RPRGFGF++FD+E+AV+ V+   FH+LN K VEVKRA+PKDA    G
Sbjct: 136 VTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALPKDANPGGG 195



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 32/86 (37%), Positives = 53/86 (61%)
 Frame = -2

Query: 265 KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 86
           K+F+GG+S   +E++ + YF  +G ++  VVM D  T RPRGFGF+ F     ++ V+Q 
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 85  NFHELNNKSVEVKRAVPKDAATNSGR 8
             H ++ ++VE KRA+ ++    S R
Sbjct: 67  K-HIIDGRTVEAKRALSREEQQTSSR 91


>emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
          Length = 464

 Score =  220 bits (561), Expect = 2e-55
 Identities = 117/240 (48%), Positives = 149/240 (62%), Gaps = 2/240 (0%)
 Frame = -2

Query: 724 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 545
           MDSDQGKLF+GGIS+ET E+ L+++F  YGEV   V+MRD+ T RPRGFGFVVFADPS++
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60

Query: 544 DQALEENHVICSRTVEVKKAVPRGEQH--QHYHNSNQEQHSRGFGXXXXXXXXXXXXXXX 371
           D+ L+E H+I  RTVE K+A+ R EQ       N N  ++S G                 
Sbjct: 61  DRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGG----------------- 103

Query: 370 XXXXXXXXXXXXXXXXXXXXXXXXXGGNNTQFRSKKIFVGGLSASVTEEEFRGYFEKFGR 191
                                    GGN    ++KKIFVGGL  +++EE FR YFE FG 
Sbjct: 104 -------------------------GGN---VKTKKIFVGGLPPTLSEEGFRQYFEAFGH 135

Query: 190 ITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQNNFHELNNKSVEVKRAVPKDAATNSG 11
           +TDVVVMYD +T RPRGFGF++FD+E+AV+ V+   FH+LN K VEVKRA+PKDA    G
Sbjct: 136 VTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALPKDANPGGG 195



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 32/86 (37%), Positives = 53/86 (61%)
 Frame = -2

Query: 265 KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 86
           K+F+GG+S   +E++ + YF  +G ++  VVM D  T RPRGFGF+ F     ++ V+Q 
Sbjct: 7   KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66

Query: 85  NFHELNNKSVEVKRAVPKDAATNSGR 8
             H ++ ++VE KRA+ ++    S R
Sbjct: 67  K-HIIDGRTVEAKRALSREEQQTSSR 91


Top