BLASTX nr result

ID: Coptis21_contig00021354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021354
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL98943.1| translocation protein, partial [Silene latifolia]...   142   2e-32
ref|XP_004173953.1| PREDICTED: translocation protein SEC63 homol...   141   6e-32
ref|XP_004140746.1| PREDICTED: translocation protein SEC63 homol...   141   6e-32
emb|CBI22629.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002275958.1| PREDICTED: translocation protein SEC63 homol...   138   5e-31

>gb|AEL98943.1| translocation protein, partial [Silene latifolia]
           gi|343172480|gb|AEL98944.1| translocation protein,
           partial [Silene latifolia]
          Length = 478

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = -1

Query: 240 MATSEENSSLFPIFILTLMALPLVPYTMIKLSRAVSKKTKSIHCQCSVCSRSGKYRKSIF 61
           MA SEENSSLFPIFILT+MALPLVPYT++KL RA  KK+KS+HCQC VCSRSGKY KS+F
Sbjct: 1   MAASEENSSLFPIFILTMMALPLVPYTIVKLCRAAKKKSKSLHCQCVVCSRSGKYHKSLF 60

Query: 60  KRISNFSTYSNLTLVLLWVI 1
           KRISNFSTYSNLTLVLLWVI
Sbjct: 61  KRISNFSTYSNLTLVLLWVI 80


>ref|XP_004173953.1| PREDICTED: translocation protein SEC63 homolog, partial [Cucumis
           sativus]
          Length = 242

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/79 (84%), Positives = 74/79 (93%)
 Frame = -1

Query: 240 MATSEENSSLFPIFILTLMALPLVPYTMIKLSRAVSKKTKSIHCQCSVCSRSGKYRKSIF 61
           MATSEENS+LFPIFILT+MALPLVPYT++KL RA SKK K IHCQC+ CSRSGKYRKSIF
Sbjct: 1   MATSEENSALFPIFILTIMALPLVPYTILKLCRAASKKAKIIHCQCAECSRSGKYRKSIF 60

Query: 60  KRISNFSTYSNLTLVLLWV 4
           KRI+NFSTYSNLTLVLLW+
Sbjct: 61  KRIANFSTYSNLTLVLLWI 79


>ref|XP_004140746.1| PREDICTED: translocation protein SEC63 homolog [Cucumis sativus]
          Length = 685

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/79 (84%), Positives = 74/79 (93%)
 Frame = -1

Query: 240 MATSEENSSLFPIFILTLMALPLVPYTMIKLSRAVSKKTKSIHCQCSVCSRSGKYRKSIF 61
           MATSEENS+LFPIFILT+MALPLVPYT++KL RA SKK K IHCQC+ CSRSGKYRKSIF
Sbjct: 1   MATSEENSALFPIFILTIMALPLVPYTILKLCRAASKKAKIIHCQCAECSRSGKYRKSIF 60

Query: 60  KRISNFSTYSNLTLVLLWV 4
           KRI+NFSTYSNLTLVLLW+
Sbjct: 61  KRIANFSTYSNLTLVLLWI 79


>emb|CBI22629.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/80 (82%), Positives = 74/80 (92%)
 Frame = -1

Query: 240 MATSEENSSLFPIFILTLMALPLVPYTMIKLSRAVSKKTKSIHCQCSVCSRSGKYRKSIF 61
           MA SEENS+LFPIFILT+MALPLVPYT++KL  A S+KTKSIHCQCS C+RSGKYR+SIF
Sbjct: 1   MAASEENSALFPIFILTIMALPLVPYTIMKLCHAASRKTKSIHCQCSECTRSGKYRRSIF 60

Query: 60  KRISNFSTYSNLTLVLLWVI 1
           KRISNFST SNLTLVLLWV+
Sbjct: 61  KRISNFSTCSNLTLVLLWVV 80


>ref|XP_002275958.1| PREDICTED: translocation protein SEC63 homolog [Vitis vinifera]
          Length = 688

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/80 (82%), Positives = 74/80 (92%)
 Frame = -1

Query: 240 MATSEENSSLFPIFILTLMALPLVPYTMIKLSRAVSKKTKSIHCQCSVCSRSGKYRKSIF 61
           MA SEENS+LFPIFILT+MALPLVPYT++KL  A S+KTKSIHCQCS C+RSGKYR+SIF
Sbjct: 1   MAASEENSALFPIFILTIMALPLVPYTIMKLCHAASRKTKSIHCQCSECTRSGKYRRSIF 60

Query: 60  KRISNFSTYSNLTLVLLWVI 1
           KRISNFST SNLTLVLLWV+
Sbjct: 61  KRISNFSTCSNLTLVLLWVV 80


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