BLASTX nr result

ID: Coptis21_contig00021349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021349
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521554.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
ref|XP_003631904.1| PREDICTED: uncharacterized protein LOC100254...    75   7e-12
ref|XP_002521551.1| conserved hypothetical protein [Ricinus comm...    74   1e-11
ref|XP_002521552.1| conserved hypothetical protein [Ricinus comm...    72   4e-11
ref|XP_003612062.1| hypothetical protein MTR_5g020860 [Medicago ...    71   1e-10

>ref|XP_002521554.1| conserved hypothetical protein [Ricinus communis]
           gi|223539232|gb|EEF40825.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 123

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 20/115 (17%)
 Frame = +2

Query: 104 RSYSGYKQL-AVESSTELLELSPKKLRSLKETTSSS-------------------NTVKG 223
           RS  GY++L A ES+  LLE   K+ ++L     +S                      K 
Sbjct: 9   RSRRGYERLVADESAICLLEEKLKRSKTLPAAARTSFDLPTKLTSDSAFPQDAAAKVAKP 68

Query: 224 KEAKKVTTSHPIFNMADARRSKKAMKKPDFMRYMAYVKEGGTWNSDSNTPAIYFK 388
             A+KV  SHP+F++ D RR KK   KP+F RY+ Y++EGG W+  SNTP IY+K
Sbjct: 69  AAARKVNKSHPLFSLFDCRRKKKTTAKPEFTRYLQYLREGGMWDVKSNTPVIYYK 123


>ref|XP_003631904.1| PREDICTED: uncharacterized protein LOC100254788 [Vitis vinifera]
           gi|297735125|emb|CBI17487.3| unnamed protein product
           [Vitis vinifera]
          Length = 199

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
 Frame = +2

Query: 104 RSYSGYKQLAVESS-TELLELSPKKLRSLK------------ETTSSSNTVKGKEAKKVT 244
           RS+ GY QL  E       E   K+++SL             E+TS  N    K+ KK +
Sbjct: 93  RSHRGYDQLGKEQPLVGAEEAQLKRVKSLPAGVFGSSKKLAPESTSQPNP-PSKQTKKAS 151

Query: 245 TSHPIFNMADARRSKKAMKKPDFMRYMAYVKEGGTWNSDSNTPAIYFK 388
            SHP+F +   RR  K   KP+F RY+ YV+EGG W+++SNTP I+FK
Sbjct: 152 KSHPLFGLFYGRRKGKTTAKPEFSRYIEYVREGGVWDTNSNTPVIHFK 199


>ref|XP_002521551.1| conserved hypothetical protein [Ricinus communis]
           gi|223539229|gb|EEF40822.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
 Frame = +2

Query: 104 RSYSGYKQL-AVESSTELLELSPKKLRSLKE---------------TTSSSNTVKGKEAK 235
           RSY GY++L A ES+  LLE + K+ ++L                    S   VK   A+
Sbjct: 9   RSYHGYERLVADESAIGLLEGNLKRSKTLPSGLRRFHVSTKLPSELAFPSDPKVKPAAAR 68

Query: 236 KVTTSHPIFNMADARRSKKAMKKPDFMRYMAYVKEGGTWNSDSNTPAIYFK 388
           K   SHP+ ++ D+RR KK   +P+  RY+ YVKEGG W+  SN P IY+K
Sbjct: 69  KSNKSHPLLSLFDSRRKKKTTARPELTRYLEYVKEGGMWDVSSNVPVIYYK 119


>ref|XP_002521552.1| conserved hypothetical protein [Ricinus communis]
           gi|223539230|gb|EEF40823.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 17/112 (15%)
 Frame = +2

Query: 104 RSYSGYKQLAVE--SSTELLELSPKKLRSLKE---------------TTSSSNTVKGKEA 232
           RSY GY++L  +  S+  LLE   K+ ++L                    S   VK   A
Sbjct: 9   RSYHGYERLVADEYSAIGLLEGDLKRSKTLPSGLRRFHVSAELPSELAFPSDPKVKPAAA 68

Query: 233 KKVTTSHPIFNMADARRSKKAMKKPDFMRYMAYVKEGGTWNSDSNTPAIYFK 388
           +K + SHP+ ++ D+RR KK   +P+  RY+ YVKEGG W+ +SN P IY+K
Sbjct: 69  RKSSKSHPLLSLFDSRRKKKTTARPELTRYIEYVKEGGMWDVNSNVPVIYYK 120


>ref|XP_003612062.1| hypothetical protein MTR_5g020860 [Medicago truncatula]
           gi|355513397|gb|AES95020.1| hypothetical protein
           MTR_5g020860 [Medicago truncatula]
           gi|388503976|gb|AFK40054.1| unknown [Medicago
           truncatula]
          Length = 125

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
 Frame = +2

Query: 89  YFRKSRSYSGYKQLAVESSTELLELSPKKLRSLKETTSSSNTV------------KGKEA 232
           Y +  + + G+ + + E   +     P    ++K   + ++T+               + 
Sbjct: 14  YEKLDKEFGGHNETSNEEYLKRSTSVPSGPSNIKTNMAMASTLGDINLQRNPTKKASSDH 73

Query: 233 KKVTTSHPIFNMADARRSKKAMKKPDFMRYMAYVKEGGTWNSDSNTPAIYFK 388
           K+ +T+HP+ N  D RR KKA  KP+F RY+ Y+KEGG W+S+SN P IY+K
Sbjct: 74  KEKSTTHPLLNFFDFRRKKKATSKPEFARYVEYLKEGGMWDSNSNKPVIYYK 125


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