BLASTX nr result

ID: Coptis21_contig00021337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021337
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK03726.1| predicted protein [Hordeum vulgare subsp. vulgare]     78   2e-12
emb|CBI25339.3| unnamed protein product [Vitis vinifera]               72   2e-10
ref|XP_003557970.1| PREDICTED: uncharacterized protein LOC100826...    68   2e-09
gb|ADN34175.1| hypothetical protein [Cucumis melo subsp. melo]         68   3e-09
emb|CBI34458.3| unnamed protein product [Vitis vinifera]               66   9e-09

>dbj|BAK03726.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 648

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
 Frame = +2

Query: 197 RLVRCPKCLKVLPELANLPVYKCGGCRTTLKAKRRNEDQEGESSEMLHHNVEDEGLICSS 376
           RLVRCPKCL +LPE AN+ VY+CGGC TTL+AK R  D +  +++ +  +  D  ++ S 
Sbjct: 10  RLVRCPKCLNILPEPANVSVYQCGGCNTTLRAKIRASDAQNVATKQVQQDSRDYSVVPSE 69

Query: 377 QKAIISSIDACEQVECRESDKEKSGSRSILNGIT-SSEELNS-DEKEESSFVAGANE--- 541
               +S+  + +QV  R+     S   S+ NG++  S+EL S     + S   GA+    
Sbjct: 70  ---TVSNGVSTKQV--RQDSGNYSVVTSVSNGVSPQSKELGSIGAAADDSITLGASSSEM 124

Query: 542 EADGNSETGSDFESPISDRKGISRGSNLTSA 634
           E +GN    S+    +SD + +    N  S+
Sbjct: 125 EQEGNGTGSSEKGDIMSDEENVMEVPNTESS 155


>emb|CBI25339.3| unnamed protein product [Vitis vinifera]
          Length = 1185

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
 Frame = +2

Query: 188 TKVRLVRCPKCLKVLPELANLPVYKCGGCRTTLKAKRR-----------NEDQEGESSEM 334
           TK+RLVRCPKC K+LPE+A +P+Y+CGGC   L+AK             +E    + +E+
Sbjct: 7   TKIRLVRCPKCWKLLPEVAGIPLYQCGGCGVFLRAKNHGNSTKTTPSGSHETGSVQRNEL 66

Query: 335 LHHNVEDEGLICSSQKAIISSIDAC---------EQVECRESDKEKSGSRSILNGITSSE 487
           +H + E+E    SS++AI SS   C         +  +CR    E + S  + +     E
Sbjct: 67  VHVS-ENEESSSSSREAIPSSTGECSLNKENGRDDLGDCRTEQPEVNFSNGVSSTTKQPE 125

Query: 488 ELNSDEKEESS 520
           + N  +K  SS
Sbjct: 126 DANFSDKVPSS 136


>ref|XP_003557970.1| PREDICTED: uncharacterized protein LOC100826692 [Brachypodium
           distachyon]
          Length = 644

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
 Frame = +2

Query: 197 RLVRCPKCLKVLPELANLPVYKCGGCRTTLKAKRRNEDQEGESSEMLHHNVEDEGLICSS 376
           RLVRCPKCL +LPE AN+ VY+CGGC TTL+AK    + +  + + +  + ++  ++ S 
Sbjct: 10  RLVRCPKCLNILPEPANVSVYQCGGCNTTLRAKVSVSNAQNVAKKQVRQDSDNYSVVTSV 69

Query: 377 QKAI------ISSI-----DAC------EQVECRESDKEKSGSRSILNGITSSEELNSDE 505
              +      + SI     D+C       + EC  + K  + S  +++   ++ E+ + E
Sbjct: 70  SNGVSPENKDLGSIVADVDDSCTPDAPSNETECESNVKASNESGGVMSDEKNAMEVTNTE 129

Query: 506 KEESSFVAG--ANEEAD 550
            +E     G   NEE +
Sbjct: 130 NKEDRKSDGRDTNEETE 146


>gb|ADN34175.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 909

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
 Frame = +2

Query: 191 KVRLVRCPKCLKVLPELANLPVYKCGGCRTTLKAKRRNEDQEGESSEMLHHNVEDEGLIC 370
           K+RLVRCPKC  +LPELA+  VY+CGGC T L+AK RN++++      L +  +++G++ 
Sbjct: 6   KLRLVRCPKCENLLPELADYSVYQCGGCGTVLRAKVRNKEEDS-----LSYKSDEDGVVG 60

Query: 371 SSQKAIISSIDACEQVECRE-SDKEKSGSRSILNGITSSEELNSDEKEESSFVAGANEEA 547
           SS      +      V+  + SD +   S   L G     +LN  EK++   V GA    
Sbjct: 61  SSSSTKSMNTPEKGTVDLSDASDVDFKSSPDSLPG-----DLNGSEKDK---VEGA---- 108

Query: 548 DGNSETGSDFESPISDRKGISRGSNLTS 631
               E   ++ +   D+ G+ +  NL +
Sbjct: 109 ----EKCEEYFNGKMDKWGVQKDLNLNT 132


>emb|CBI34458.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = +2

Query: 188 TKVRLVRCPKCLKVLPELANLPVYKCGGCRTTLKAKRRNEDQEGESSEMLHHNVEDE-GL 364
           +KVR+VRCPKC  +LPEL + PVY+CGGC   L+AK++       S++ L    +DE G 
Sbjct: 5   SKVRVVRCPKCENLLPELPDYPVYQCGGCGAVLRAKKK-----APSNDALSEKSDDENGR 59

Query: 365 ICSSQKAIISSIDACEQVECRESDKEKSG 451
             S +   +S   A     C E++KE  G
Sbjct: 60  GVSEKLESLSEKGAVSLGSCSETEKESDG 88


Top