BLASTX nr result

ID: Coptis21_contig00021320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021320
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera] gi...   135   4e-30
ref|XP_002330139.1| predicted protein [Populus trichocarpa] gi|1...   131   6e-29
ref|XP_003518180.1| PREDICTED: protein COBRA-like [Glycine max]       129   3e-28
ref|XP_002460985.1| hypothetical protein SORBIDRAFT_02g038720 [S...   128   5e-28
ref|XP_004138217.1| PREDICTED: protein COBRA-like [Cucumis sativ...   127   7e-28

>ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera]
           gi|297734083|emb|CBI15330.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  135 bits (339), Expect = 4e-30
 Identities = 61/69 (88%), Positives = 62/69 (89%)
 Frame = +1

Query: 1   YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180
           YNDLL QAGPLGNVQSE LFRKD  TFTFDKGWAFPRRIYFNGDNCVMPP DAYPWLPNA
Sbjct: 371 YNDLLSQAGPLGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNA 430

Query: 181 SPRPVVSVL 207
           S RP VS+L
Sbjct: 431 SSRPTVSLL 439


>ref|XP_002330139.1| predicted protein [Populus trichocarpa] gi|118482010|gb|ABK92936.1|
           unknown [Populus trichocarpa]
           gi|222871273|gb|EEF08404.1| predicted protein [Populus
           trichocarpa]
          Length = 457

 Score =  131 bits (329), Expect = 6e-29
 Identities = 58/69 (84%), Positives = 61/69 (88%)
 Frame = +1

Query: 1   YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180
           YND L QAGPLGNVQSE LFRKD  TFTF+KGWAFPRRIYFNGDNCVMPP DAYPWLPN 
Sbjct: 372 YNDFLSQAGPLGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPND 431

Query: 181 SPRPVVSVL 207
           S RPV+S+L
Sbjct: 432 SSRPVISLL 440


>ref|XP_003518180.1| PREDICTED: protein COBRA-like [Glycine max]
          Length = 458

 Score =  129 bits (323), Expect = 3e-28
 Identities = 57/69 (82%), Positives = 60/69 (86%)
 Frame = +1

Query: 1   YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180
           YND LMQAGPLGNVQSE LFRKD  TFTFDKGWAFPRR+YFNGD CVMPP DAYPWLPNA
Sbjct: 374 YNDFLMQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDAYPWLPNA 433

Query: 181 SPRPVVSVL 207
             R +VS+L
Sbjct: 434 GSRQIVSLL 442


>ref|XP_002460985.1| hypothetical protein SORBIDRAFT_02g038720 [Sorghum bicolor]
           gi|241924362|gb|EER97506.1| hypothetical protein
           SORBIDRAFT_02g038720 [Sorghum bicolor]
          Length = 458

 Score =  128 bits (321), Expect = 5e-28
 Identities = 57/69 (82%), Positives = 60/69 (86%)
 Frame = +1

Query: 1   YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180
           YNDLLM AGP GNVQSE LFRK+P TFTF KGWAFPRR+YFNGDNCVMPP DAYPWLPNA
Sbjct: 372 YNDLLMTAGPDGNVQSELLFRKEPSTFTFQKGWAFPRRVYFNGDNCVMPPPDAYPWLPNA 431

Query: 181 SPRPVVSVL 207
           SPR   S+L
Sbjct: 432 SPRLSASLL 440


>ref|XP_004138217.1| PREDICTED: protein COBRA-like [Cucumis sativus]
           gi|449529459|ref|XP_004171717.1| PREDICTED: protein
           COBRA-like [Cucumis sativus]
          Length = 455

 Score =  127 bits (320), Expect = 7e-28
 Identities = 56/69 (81%), Positives = 62/69 (89%)
 Frame = +1

Query: 1   YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180
           YNDLL QAGPLGNVQSE LF+KD  TFTFDKGWAFPRR+YFNGDNCVMPP +AYP+LPNA
Sbjct: 372 YNDLLNQAGPLGNVQSELLFQKDQNTFTFDKGWAFPRRVYFNGDNCVMPPPEAYPYLPNA 431

Query: 181 SPRPVVSVL 207
           S RP +S+L
Sbjct: 432 SSRPAISLL 440


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