BLASTX nr result
ID: Coptis21_contig00021320
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00021320 (270 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera] gi... 135 4e-30 ref|XP_002330139.1| predicted protein [Populus trichocarpa] gi|1... 131 6e-29 ref|XP_003518180.1| PREDICTED: protein COBRA-like [Glycine max] 129 3e-28 ref|XP_002460985.1| hypothetical protein SORBIDRAFT_02g038720 [S... 128 5e-28 ref|XP_004138217.1| PREDICTED: protein COBRA-like [Cucumis sativ... 127 7e-28 >ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera] gi|297734083|emb|CBI15330.3| unnamed protein product [Vitis vinifera] Length = 456 Score = 135 bits (339), Expect = 4e-30 Identities = 61/69 (88%), Positives = 62/69 (89%) Frame = +1 Query: 1 YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180 YNDLL QAGPLGNVQSE LFRKD TFTFDKGWAFPRRIYFNGDNCVMPP DAYPWLPNA Sbjct: 371 YNDLLSQAGPLGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNA 430 Query: 181 SPRPVVSVL 207 S RP VS+L Sbjct: 431 SSRPTVSLL 439 >ref|XP_002330139.1| predicted protein [Populus trichocarpa] gi|118482010|gb|ABK92936.1| unknown [Populus trichocarpa] gi|222871273|gb|EEF08404.1| predicted protein [Populus trichocarpa] Length = 457 Score = 131 bits (329), Expect = 6e-29 Identities = 58/69 (84%), Positives = 61/69 (88%) Frame = +1 Query: 1 YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180 YND L QAGPLGNVQSE LFRKD TFTF+KGWAFPRRIYFNGDNCVMPP DAYPWLPN Sbjct: 372 YNDFLSQAGPLGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPND 431 Query: 181 SPRPVVSVL 207 S RPV+S+L Sbjct: 432 SSRPVISLL 440 >ref|XP_003518180.1| PREDICTED: protein COBRA-like [Glycine max] Length = 458 Score = 129 bits (323), Expect = 3e-28 Identities = 57/69 (82%), Positives = 60/69 (86%) Frame = +1 Query: 1 YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180 YND LMQAGPLGNVQSE LFRKD TFTFDKGWAFPRR+YFNGD CVMPP DAYPWLPNA Sbjct: 374 YNDFLMQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDAYPWLPNA 433 Query: 181 SPRPVVSVL 207 R +VS+L Sbjct: 434 GSRQIVSLL 442 >ref|XP_002460985.1| hypothetical protein SORBIDRAFT_02g038720 [Sorghum bicolor] gi|241924362|gb|EER97506.1| hypothetical protein SORBIDRAFT_02g038720 [Sorghum bicolor] Length = 458 Score = 128 bits (321), Expect = 5e-28 Identities = 57/69 (82%), Positives = 60/69 (86%) Frame = +1 Query: 1 YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180 YNDLLM AGP GNVQSE LFRK+P TFTF KGWAFPRR+YFNGDNCVMPP DAYPWLPNA Sbjct: 372 YNDLLMTAGPDGNVQSELLFRKEPSTFTFQKGWAFPRRVYFNGDNCVMPPPDAYPWLPNA 431 Query: 181 SPRPVVSVL 207 SPR S+L Sbjct: 432 SPRLSASLL 440 >ref|XP_004138217.1| PREDICTED: protein COBRA-like [Cucumis sativus] gi|449529459|ref|XP_004171717.1| PREDICTED: protein COBRA-like [Cucumis sativus] Length = 455 Score = 127 bits (320), Expect = 7e-28 Identities = 56/69 (81%), Positives = 62/69 (89%) Frame = +1 Query: 1 YNDLLMQAGPLGNVQSEFLFRKDPETFTFDKGWAFPRRIYFNGDNCVMPPADAYPWLPNA 180 YNDLL QAGPLGNVQSE LF+KD TFTFDKGWAFPRR+YFNGDNCVMPP +AYP+LPNA Sbjct: 372 YNDLLNQAGPLGNVQSELLFQKDQNTFTFDKGWAFPRRVYFNGDNCVMPPPEAYPYLPNA 431 Query: 181 SPRPVVSVL 207 S RP +S+L Sbjct: 432 SSRPAISLL 440