BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021316
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566672.1| RNA recognition motif-containing protein [Arabi...    63   5e-08
dbj|BAB01902.1| unnamed protein product [Arabidopsis thaliana]         63   5e-08
ref|XP_002447049.1| hypothetical protein SORBIDRAFT_06g027510 [S...    63   5e-08
ref|NP_001149488.1| LOC100283114 [Zea mays] gi|195627510|gb|ACG3...    63   5e-08
ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [...    61   2e-07

>ref|NP_566672.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|20466724|gb|AAM20679.1| unknown protein [Arabidopsis
           thaliana] gi|21536799|gb|AAM61131.1| unknown
           [Arabidopsis thaliana] gi|25084257|gb|AAN72206.1|
           unknown protein [Arabidopsis thaliana]
           gi|332642921|gb|AEE76442.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 374

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 41/179 (22%), Positives = 81/179 (45%)
 Frame = -2

Query: 538 YICVLDTNGLEFGSEKALFDYYVKLLSEVVGSDEEARKRIYCVSRDWNHLGFCSHIDAVA 359
           ++ +LD       S+ A+ DYYV++L++V+G++++A+  IY  S D  H GFC HID  A
Sbjct: 73  WMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFD-THFGFCCHIDEDA 131

Query: 358 AEKLKDFPLVHFVVEDKYFLAREKTTAVAESTNIFSPLNQNQRLLNIFSYYHFSKLNLEW 179
           + +L   P V  +  ++ + + +K   +     +           ++F +          
Sbjct: 132 SRQLASLPGVVSIRPEQDYSSEKKNYGIGSHKGV-----------SLFDH---------G 171

Query: 178 DFDHWLINIKCPEGGFATWTEALECCIEVLXXXXXXXXXXXXKIYVIWSIKPFGFGAEI 2
              HW++ I  P  G  T  + ++ C+++L             +Y +     FGF  ++
Sbjct: 172 TVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDL 230


>dbj|BAB01902.1| unnamed protein product [Arabidopsis thaliana]
          Length = 396

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 41/179 (22%), Positives = 81/179 (45%)
 Frame = -2

Query: 538 YICVLDTNGLEFGSEKALFDYYVKLLSEVVGSDEEARKRIYCVSRDWNHLGFCSHIDAVA 359
           ++ +LD       S+ A+ DYYV++L++V+G++++A+  IY  S D  H GFC HID  A
Sbjct: 73  WMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFD-THFGFCCHIDEDA 131

Query: 358 AEKLKDFPLVHFVVEDKYFLAREKTTAVAESTNIFSPLNQNQRLLNIFSYYHFSKLNLEW 179
           + +L   P V  +  ++ + + +K   +     +           ++F +          
Sbjct: 132 SRQLASLPGVVSIRPEQDYSSEKKNYGIGSHKGV-----------SLFDH---------G 171

Query: 178 DFDHWLINIKCPEGGFATWTEALECCIEVLXXXXXXXXXXXXKIYVIWSIKPFGFGAEI 2
              HW++ I  P  G  T  + ++ C+++L             +Y +     FGF  ++
Sbjct: 172 TVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDL 230


>ref|XP_002447049.1| hypothetical protein SORBIDRAFT_06g027510 [Sorghum bicolor]
           gi|241938232|gb|EES11377.1| hypothetical protein
           SORBIDRAFT_06g027510 [Sorghum bicolor]
          Length = 216

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
 Frame = -2

Query: 565 RSTTEYFPMY--------ICVLDTNGLEFGSEKALFDYYVKLLSEVVGSDEEARKRIYCV 410
           R+ TE  P++        + V+D  G E  +++ + D Y++ L++VVGS+EEA+KRIY V
Sbjct: 64  RAPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVVGSEEEAKKRIYNV 123

Query: 409 SRDWNHLGFCSHIDAVAAEKLKDFPLVHFVVEDKYFLAREK 287
           S +  + GF   ID   + KL+  P V FV+ D Y  A  K
Sbjct: 124 SCE-RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENK 163


>ref|NP_001149488.1| LOC100283114 [Zea mays] gi|195627510|gb|ACG35585.1| DAG protein
           [Zea mays] gi|223973333|gb|ACN30854.1| unknown [Zea
           mays]
          Length = 215

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
 Frame = -2

Query: 565 RSTTEYFPMY--------ICVLDTNGLEFGSEKALFDYYVKLLSEVVGSDEEARKRIYCV 410
           R+ TE  P++        + V+D  G E  +++ + D Y++ L++VVGS+EEA+KRIY V
Sbjct: 63  RAPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVVGSEEEAKKRIYNV 122

Query: 409 SRDWNHLGFCSHIDAVAAEKLKDFPLVHFVVEDKYFLAREK 287
           S +  + GF   ID   + KL+  P V FV+ D Y  A  K
Sbjct: 123 SCE-RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENK 162


>ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
           distachyon]
          Length = 215

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
 Frame = -2

Query: 565 RSTTEYFPMY--------ICVLDTNGLEFGSEKALFDYYVKLLSEVVGSDEEARKRIYCV 410
           R+ TE  P++        + V+D  G E  +++ + D Y++ L++VVGS+EEA+K+IY V
Sbjct: 63  RAPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNV 122

Query: 409 SRDWNHLGFCSHIDAVAAEKLKDFPLVHFVVEDKYFLAREK 287
           S +  + GF   ID   + KL+  P V FV+ D Y  A  K
Sbjct: 123 SCE-RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENK 162