BLASTX nr result
ID: Coptis21_contig00021313
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00021313 (742 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814... 251 1e-64 emb|CBI31917.3| unnamed protein product [Vitis vinifera] 249 4e-64 ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicag... 234 2e-59 ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212... 223 3e-56 ref|XP_001781419.1| predicted protein [Physcomitrella patens sub... 174 2e-41 >ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814892 [Glycine max] Length = 446 Score = 251 bits (641), Expect = 1e-64 Identities = 113/186 (60%), Positives = 134/186 (72%) Frame = +3 Query: 3 KCNNPGHLAEDCLVSSGAQSYSSISRDLRALYRRCHQIGKXXXXXXXXXXXXXXXXXXXX 182 KC PGHLAEDC+V+ G+ SSI +DL LYRRCHQIGK Sbjct: 261 KCQRPGHLAEDCMVTDGSNRSSSIPKDLLQLYRRCHQIGKDLLAANCNVCRRSSNLATCL 320 Query: 183 XXXXNYCDSSGHLHEHIVAHPSHKQLYSYKLQRLVKCCKSTCDVTDINDLLSCHYCIDKA 362 CD +GHL EHI HPSH++ YS+KL+RLVKCCKSTC VTDI DLL CHYC DKA Sbjct: 321 DCSIVLCDGAGHLIEHIRTHPSHQKYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFDKA 380 Query: 363 FEKFYDMYTATWKHAGISIIWNSICCEEHFSWHRMNCMSADVEGSAYVIRPHSQRDKRIQ 542 FEKFYDMYTATWK AG++I+W SICCE+HF+WHRMNC++A+VE SAY+++P + KR Q Sbjct: 381 FEKFYDMYTATWKGAGLAIMWGSICCEDHFTWHRMNCLNANVEESAYILKPDGHKGKRTQ 440 Query: 543 LSDFIF 560 LSDFIF Sbjct: 441 LSDFIF 446 >emb|CBI31917.3| unnamed protein product [Vitis vinifera] Length = 448 Score = 249 bits (636), Expect = 4e-64 Identities = 115/203 (56%), Positives = 139/203 (68%), Gaps = 17/203 (8%) Frame = +3 Query: 3 KCNNPGHLAEDCLVSS-----------------GAQSYSSISRDLRALYRRCHQIGKXXX 131 KC PGHLA+DCLV + G + ISRDL LY+RCHQIGK Sbjct: 246 KCQRPGHLADDCLVMTSNSQSPCLSQTCNKVPMGQNKSTFISRDLLGLYKRCHQIGKNLT 305 Query: 132 XXXXXXXXXXXXXXXXXXXXXNYCDSSGHLHEHIVAHPSHKQLYSYKLQRLVKCCKSTCD 311 CD++GHL EHI+AHPSH++++SYKL+RLVKCCKSTC+ Sbjct: 306 TAKCNLCCSSSTLATCLDCSTVICDNAGHLKEHIIAHPSHQKIFSYKLKRLVKCCKSTCE 365 Query: 312 VTDINDLLSCHYCIDKAFEKFYDMYTATWKHAGISIIWNSICCEEHFSWHRMNCMSADVE 491 VTD+ DLL CHYC+DKAF+KFYDMYTATWK G+SIIW SICCEEHF+WHRMNC++ADVE Sbjct: 366 VTDLKDLLVCHYCLDKAFDKFYDMYTATWKGNGLSIIWGSICCEEHFAWHRMNCLNADVE 425 Query: 492 GSAYVIRPHSQRDKRIQLSDFIF 560 SAY+ R H+Q++ IQLSDFIF Sbjct: 426 DSAYIFRRHAQKNNSIQLSDFIF 448 >ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] gi|355509778|gb|AES90920.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] Length = 452 Score = 234 bits (596), Expect = 2e-59 Identities = 111/193 (57%), Positives = 130/193 (67%), Gaps = 7/193 (3%) Frame = +3 Query: 3 KCNNPGHLAEDCLVSSGAQ-------SYSSISRDLRALYRRCHQIGKXXXXXXXXXXXXX 161 KC PGHLAEDCLV S ++ SSI +DL LYRRCHQ+GK Sbjct: 260 KCQRPGHLAEDCLVKSCSEITVGRSNRSSSIPKDLLGLYRRCHQLGKDLLAANCNTCRSS 319 Query: 162 XXXXXXXXXXXNYCDSSGHLHEHIVAHPSHKQLYSYKLQRLVKCCKSTCDVTDINDLLSC 341 CD +GHL +HI HPSH++ YS+KL+RLVKCCKSTC VTDI DLL C Sbjct: 320 LNLATCIDCSIVLCDGAGHLDDHIRTHPSHQKYYSHKLKRLVKCCKSTCKVTDIKDLLVC 379 Query: 342 HYCIDKAFEKFYDMYTATWKHAGISIIWNSICCEEHFSWHRMNCMSADVEGSAYVIRPHS 521 HYC DKAFEKFYDMYTATWK AG SII SICCE+HF+WHRMNC++A E SAY+++ + Sbjct: 380 HYCFDKAFEKFYDMYTATWKGAGFSIISGSICCEDHFTWHRMNCLNAGAEESAYIVQRNG 439 Query: 522 QRDKRIQLSDFIF 560 + KR QLSDFIF Sbjct: 440 HKGKRTQLSDFIF 452 >ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212105 [Cucumis sativus] gi|449513293|ref|XP_004164287.1| PREDICTED: uncharacterized protein LOC101227135 [Cucumis sativus] Length = 443 Score = 223 bits (568), Expect = 3e-56 Identities = 104/194 (53%), Positives = 128/194 (65%), Gaps = 8/194 (4%) Frame = +3 Query: 3 KCNNPGHLAEDCLVSSGAQ--------SYSSISRDLRALYRRCHQIGKXXXXXXXXXXXX 158 KC PGHLAEDCLV + Q + + + DL LY+RC+Q+GK Sbjct: 250 KCQKPGHLAEDCLVKTSNQVRIAMQQMTSNPVPGDLLGLYKRCYQMGKNLSNALCNECSC 309 Query: 159 XXXXXXXXXXXXNYCDSSGHLHEHIVAHPSHKQLYSYKLQRLVKCCKSTCDVTDINDLLS 338 YCDS+GHL+EHI HP+H YS+KL+RLVKCCKSTC VT I DLL Sbjct: 310 SYSLATCLDCNTVYCDSAGHLNEHIHTHPTHGLYYSHKLKRLVKCCKSTCRVTQIKDLLV 369 Query: 339 CHYCIDKAFEKFYDMYTATWKHAGISIIWNSICCEEHFSWHRMNCMSADVEGSAYVIRPH 518 CHYC DKAF+KFYDMYTA+W AG+SII SICCE+HF+WHRMNC +ADVE +AY+I Sbjct: 370 CHYCFDKAFDKFYDMYTASWNRAGLSIISGSICCEDHFAWHRMNCFNADVEDTAYIINRK 429 Query: 519 SQRDKRIQLSDFIF 560 ++DK + +SDFIF Sbjct: 430 PKKDKFVSISDFIF 443 >ref|XP_001781419.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667156|gb|EDQ53793.1| predicted protein [Physcomitrella patens subsp. patens] Length = 489 Score = 174 bits (440), Expect = 2e-41 Identities = 88/200 (44%), Positives = 116/200 (58%), Gaps = 14/200 (7%) Frame = +3 Query: 3 KCNNPGHLAEDCLVSSG--AQSYSSISRD------------LRALYRRCHQIGKXXXXXX 140 KC PGHL EDC+VS G AQS SS SR L+ LYRRC +I Sbjct: 291 KCKRPGHLPEDCVVSMGIPAQS-SSDSRQYNVPPTFSAGPMLQDLYRRCKEIEGQAKASK 349 Query: 141 XXXXXXXXXXXXXXXXXXNYCDSSGHLHEHIVAHPSHKQLYSYKLQRLVKCCKSTCDVTD 320 +CDS GHL H+ +PSH+++YS KL RLVKCCK C V D Sbjct: 350 CDKCGINFNLAYCLDCGKTFCDSQGHLSSHMQENPSHRRMYSRKLHRLVKCCKGPCPVVD 409 Query: 321 INDLLSCHYCIDKAFEKFYDMYTATWKHAGISIIWNSICCEEHFSWHRMNCMSADVEGSA 500 + +LL+C+ C+ +AF+K+Y MY ATWK AG+ +I N+ICC+ HF+WHRMNC + DVE SA Sbjct: 410 MRELLACNSCLSEAFDKYYSMYNATWKGAGLKLIVNAICCDAHFNWHRMNCGNVDVEDSA 469 Query: 501 YVIRPHSQRDKRIQLSDFIF 560 ++R Q ++F+F Sbjct: 470 SLLRKDGSDLHGSQFNEFLF 489