BLASTX nr result

ID: Coptis21_contig00021307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021307
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278401.1| PREDICTED: uncharacterized protein LOC100253...   163   7e-38
ref|XP_002523900.1| conserved hypothetical protein [Ricinus comm...   157   3e-36
ref|XP_003619775.1| hypothetical protein MTR_6g068850 [Medicago ...   153   5e-35
ref|XP_003524987.1| PREDICTED: uncharacterized protein LOC100803...   152   9e-35
ref|NP_001236368.1| uncharacterized protein LOC100500324 [Glycin...   152   1e-34

>ref|XP_002278401.1| PREDICTED: uncharacterized protein LOC100253091 [Vitis vinifera]
           gi|296086074|emb|CBI31515.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  163 bits (412), Expect = 7e-38
 Identities = 82/110 (74%), Positives = 91/110 (82%), Gaps = 3/110 (2%)
 Frame = -2

Query: 432 MGSEGLQAAKVYRHLLKAVKKHIGKEEHKRHFSDFINQEFHK---VSDPSTAHQKIMLAH 262
           MGSE LQA KVYR LLKAVK HIGKE+HKRHF D I QEF K   + D S+  QK+ +AH
Sbjct: 1   MGSEALQATKVYRQLLKAVKNHIGKEDHKRHFRDHITQEFQKNRGLLDLSSIQQKLKVAH 60

Query: 261 NYSYLLNSVHHHKELLFSYNIAVDRSDEVKRTLNKSAASVGLQLPEVYQP 112
           +Y+YLLNSVHHHKELL SYNIAVDRSDE+KR L KSA+SVGLQLPEVYQP
Sbjct: 61  DYTYLLNSVHHHKELLLSYNIAVDRSDEMKRILGKSASSVGLQLPEVYQP 110


>ref|XP_002523900.1| conserved hypothetical protein [Ricinus communis]
           gi|223536830|gb|EEF38469.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 110

 Score =  157 bits (398), Expect = 3e-36
 Identities = 78/110 (70%), Positives = 90/110 (81%), Gaps = 3/110 (2%)
 Frame = -2

Query: 432 MGSEGLQAAKVYRHLLKAVKKHIGKEEHKRHFSDFINQEFHK---VSDPSTAHQKIMLAH 262
           M  E L A KVYRHLLKA+KKHIG+E++K+HF +F+  EF K   +SD S   QKI LA 
Sbjct: 1   MSFEALHAVKVYRHLLKAIKKHIGQEDYKKHFGEFVMLEFRKNTNLSDHSAIQQKIKLAR 60

Query: 261 NYSYLLNSVHHHKELLFSYNIAVDRSDEVKRTLNKSAASVGLQLPEVYQP 112
           NY++LLNSVHHHK+LLFSYNIAVDRSDE+KR L KSAASVGLQLPEVYQP
Sbjct: 61  NYTFLLNSVHHHKDLLFSYNIAVDRSDEMKRILGKSAASVGLQLPEVYQP 110


>ref|XP_003619775.1| hypothetical protein MTR_6g068850 [Medicago truncatula]
           gi|355494790|gb|AES75993.1| hypothetical protein
           MTR_6g068850 [Medicago truncatula]
          Length = 110

 Score =  153 bits (387), Expect = 5e-35
 Identities = 74/109 (67%), Positives = 88/109 (80%), Gaps = 3/109 (2%)
 Frame = -2

Query: 432 MGSEGLQAAKVYRHLLKAVKKHIGKEEHKRHFSDFINQEFHK---VSDPSTAHQKIMLAH 262
           M +E  Q   +YRHLLKAVKKHIGKEE+K+HF +F+  EFHK   +SD     QKI LA 
Sbjct: 1   MRTEAFQTVNIYRHLLKAVKKHIGKEENKKHFLEFVTSEFHKNRNLSDGVAVQQKIKLAR 60

Query: 261 NYSYLLNSVHHHKELLFSYNIAVDRSDEVKRTLNKSAASVGLQLPEVYQ 115
           +Y+Y+LN VHHHK+LLFSYNIA+DRS+EV+RTL KSAASVGLQLPEVYQ
Sbjct: 61  DYTYMLNGVHHHKDLLFSYNIAIDRSNEVQRTLGKSAASVGLQLPEVYQ 109


>ref|XP_003524987.1| PREDICTED: uncharacterized protein LOC100803307 isoform 1 [Glycine
           max] gi|356512564|ref|XP_003524988.1| PREDICTED:
           uncharacterized protein LOC100803307 isoform 2 [Glycine
           max]
          Length = 110

 Score =  152 bits (385), Expect = 9e-35
 Identities = 77/110 (70%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
 Frame = -2

Query: 432 MGSEGLQAAKVYRHLLKAVKKHIGKEEHKRHFSDFINQEFHK---VSDPSTAHQKIMLAH 262
           M SE  Q A +YR LLKAVKKHIGKEE+K+HF +F+  EF     +SD     QKI LA 
Sbjct: 1   MRSEAFQTANIYRLLLKAVKKHIGKEENKKHFIEFVTSEFRNNRNLSDNVAIQQKIKLAR 60

Query: 261 NYSYLLNSVHHHKELLFSYNIAVDRSDEVKRTLNKSAASVGLQLPEVYQP 112
           +Y++LLNSVHHHK+LLFSYNIAVDRSDEVKRTL KSA+SVGLQLPEVYQP
Sbjct: 61  DYTFLLNSVHHHKDLLFSYNIAVDRSDEVKRTLGKSASSVGLQLPEVYQP 110


>ref|NP_001236368.1| uncharacterized protein LOC100500324 [Glycine max]
           gi|255630024|gb|ACU15364.1| unknown [Glycine max]
          Length = 110

 Score =  152 bits (384), Expect = 1e-34
 Identities = 77/110 (70%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
 Frame = -2

Query: 432 MGSEGLQAAKVYRHLLKAVKKHIGKEEHKRHFSDFINQEFHK---VSDPSTAHQKIMLAH 262
           M S+  Q A +YR LLKAVKKHIGKEE+KRHF +F+  EF     +SD     QKI LA 
Sbjct: 1   MRSDAFQTANIYRLLLKAVKKHIGKEENKRHFIEFVTSEFRNNRNLSDCVAIQQKIKLAR 60

Query: 261 NYSYLLNSVHHHKELLFSYNIAVDRSDEVKRTLNKSAASVGLQLPEVYQP 112
           +Y++LLNSVHHHK+LLFSYNIAVDRSDEVKRTL KSA+SVGLQLPEVYQP
Sbjct: 61  DYTFLLNSVHHHKDLLFSYNIAVDRSDEVKRTLGKSASSVGLQLPEVYQP 110


Top