BLASTX nr result

ID: Coptis21_contig00021305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021305
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242...   186   4e-45
emb|CBI39045.3| unnamed protein product [Vitis vinifera]              186   5e-45
ref|XP_002319723.1| predicted protein [Populus trichocarpa] gi|2...   135   8e-30
ref|NP_001051270.1| Os03g0748600 [Oryza sativa Japonica Group] g...   132   8e-29
ref|XP_002870538.1| predicted protein [Arabidopsis lyrata subsp....   129   4e-28

>ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242796 [Vitis vinifera]
          Length = 175

 Score =  186 bits (472), Expect = 4e-45
 Identities = 97/159 (61%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
 Frame = -2

Query: 682 QPSSPFLEIICKGSSNVRRFAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPISFG 503
           QP  PF+E++CK S   RRFA GTEAGFA+ LIN+KLD G+PLA +IEAVKEGEEP+SFG
Sbjct: 18  QPLPPFVEVMCKSSGRTRRFAAGTEAGFAIYLINKKLDIGLPLALHIEAVKEGEEPVSFG 77

Query: 502 PNAVLVDYGDGWKLQTVIDEGFV---KEKGAQTTNEQTPDVVQKTDNLQRSTSESKPHIS 332
           PNAVLVDYGDGWKL+TV D  F    KEK  Q T  + P  +  +   + + S S+P IS
Sbjct: 78  PNAVLVDYGDGWKLETVTDVEFAGVGKEKRVQPTKVKIPKSLGGSHPSESAVS-SQPVIS 136

Query: 331 FPYIGRIVLALTFIILLGVMFTLALENLPRLFLFVTSSM 215
           F YIG+I +A+ FI  LG +FTLALENLPRL LF+ SSM
Sbjct: 137 FVYIGKIFIAIIFIFALGAVFTLALENLPRLILFINSSM 175


>emb|CBI39045.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score =  186 bits (471), Expect = 5e-45
 Identities = 97/160 (60%), Positives = 117/160 (73%), Gaps = 4/160 (2%)
 Frame = -2

Query: 682 QPSSPFLEIICKGSSNVRRFAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPISFG 503
           QP  PF+E++CK S   RRFA GTEAGFA+ LIN+KLD G+PLA +IEAVKEGEEP+SFG
Sbjct: 18  QPLPPFVEVMCKSSGRTRRFAAGTEAGFAIYLINKKLDIGLPLALHIEAVKEGEEPVSFG 77

Query: 502 PNAVLVDYGDGWKLQTVIDEGFV----KEKGAQTTNEQTPDVVQKTDNLQRSTSESKPHI 335
           PNAVLVDYGDGWKL+TV D  F     KEK  Q T  + P  +  +   + + S S+P I
Sbjct: 78  PNAVLVDYGDGWKLETVTDVEFAVGVGKEKRVQPTKVKIPKSLGGSHPSESAVS-SQPVI 136

Query: 334 SFPYIGRIVLALTFIILLGVMFTLALENLPRLFLFVTSSM 215
           SF YIG+I +A+ FI  LG +FTLALENLPRL LF+ SSM
Sbjct: 137 SFVYIGKIFIAIIFIFALGAVFTLALENLPRLILFINSSM 176


>ref|XP_002319723.1| predicted protein [Populus trichocarpa] gi|222858099|gb|EEE95646.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  135 bits (340), Expect = 8e-30
 Identities = 73/139 (52%), Positives = 96/139 (69%), Gaps = 2/139 (1%)
 Frame = -2

Query: 625 FAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPISFGPNAVLVDYGDGWKLQ--TV 452
           FA GT+AGFA+ LINRKLD G P   +IEAVK+GEEPISFGP+AVLVDYG+ WKLQ  TV
Sbjct: 1   FAAGTKAGFAVSLINRKLDVGAPFVLHIEAVKDGEEPISFGPDAVLVDYGNDWKLQTFTV 60

Query: 451 IDEGFVKEKGAQTTNEQTPDVVQKTDNLQRSTSESKPHISFPYIGRIVLALTFIILLGVM 272
           +D G  + +  Q   +Q+      +D  + + + + P ISF Y+ +I++A   + +LG  
Sbjct: 61  LDYGVRQAEHFQRIPKQS------SDGSRPAKTATNPGISFLYMAKILVAFVLLFVLGAS 114

Query: 271 FTLALENLPRLFLFVTSSM 215
           FTLALENLPRL LF+ S M
Sbjct: 115 FTLALENLPRLILFINSFM 133


>ref|NP_001051270.1| Os03g0748600 [Oryza sativa Japonica Group]
           gi|18087672|gb|AAL58964.1|AC091811_13 unknown protein
           [Oryza sativa Japonica Group]
           gi|108711081|gb|ABF98876.1| expressed protein [Oryza
           sativa Japonica Group] gi|113549741|dbj|BAF13184.1|
           Os03g0748600 [Oryza sativa Japonica Group]
           gi|215692973|dbj|BAG88393.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193751|gb|EEC76178.1| hypothetical protein
           OsI_13509 [Oryza sativa Indica Group]
           gi|222625797|gb|EEE59929.1| hypothetical protein
           OsJ_12571 [Oryza sativa Japonica Group]
          Length = 171

 Score =  132 bits (331), Expect = 8e-29
 Identities = 70/151 (46%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
 Frame = -2

Query: 679 PSSPFLEIICKGSSNVRRFAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPISFGP 500
           P  PFLE+ C+ S  VRRFA GT A +AL  +NRKL  G P A ++EAVK+GEEP+SFGP
Sbjct: 21  PPPPFLEVKCRSSGEVRRFAFGTTARYALHAVNRKLAPGAPAALHVEAVKDGEEPVSFGP 80

Query: 499 NAVLVDYGDGWKLQTVIDE---GFVKEKGAQTTNEQTPDVVQKTDNLQRSTSESKPHISF 329
            A L DYGDGWKLQT+ ++   G+ +   + T         ++ D  Q + +        
Sbjct: 81  AAPLADYGDGWKLQTITEQDAPGYYQTPASDT---------RRDDTKQSAKNPRDQETMA 131

Query: 328 PYIGRIVLALTFIILLGVMFTLALENLPRLF 236
            YI +IVLA  FI LLG +FT  LE LP +F
Sbjct: 132 AYITKIVLAFVFIFLLGGLFTYLLETLPDMF 162


>ref|XP_002870538.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316374|gb|EFH46797.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  129 bits (325), Expect = 4e-28
 Identities = 81/165 (49%), Positives = 103/165 (62%), Gaps = 10/165 (6%)
 Frame = -2

Query: 679 PSSP--FLEIICKGSSNVRRFAVGTEAGFALRLINRKLDSGIPLASYIEAVKEGEEPISF 506
           PS P  FLE+ C+ S    RF  GT+A FA+ +IN+KL S  P   +IEAVK+GEEPISF
Sbjct: 11  PSQPPLFLEVFCEVSGKEYRFTSGTKAKFAVSVINKKLGSLKPRVVFIEAVKDGEEPISF 70

Query: 505 GPNAVLVDYGDGWKLQTVIDEGFVKEKGAQTTNEQT--PDVVQKTDNLQRS--TSESKPH 338
           G +A LV+YG GWKL+TV+D  F    G +  N Q   P V+    + + S  T +S+P 
Sbjct: 71  GDDACLVNYGHGWKLKTVVDSDF---PGTEKNNLQQHFPSVISMGFDSKDSKYTKDSRPE 127

Query: 337 I---SFPYIGRIVLALTFIILLGVMFTLALENLPRL-FLFVTSSM 215
           I   S  YIGRI  A   + +LG +FT+ALENLPRL  LF  SSM
Sbjct: 128 IGDQSLKYIGRIFFAFVLMFILGGLFTVALENLPRLILLFKNSSM 172


Top