BLASTX nr result

ID: Coptis21_contig00021285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021285
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm...   167   1e-39
ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252...   163   2e-38
ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...   162   3e-38
ref|XP_002276324.1| PREDICTED: uncharacterized protein LOC100256...   161   8e-38
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   161   8e-38

>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
           gi|223540049|gb|EEF41626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score =  167 bits (423), Expect = 1e-39
 Identities = 85/189 (44%), Positives = 124/189 (65%), Gaps = 2/189 (1%)
 Frame = +1

Query: 4   ISTDPNILTKSLENRIRPAISFLKGILPTDSDVLTVIKRSTWVLNQDPQKRLAPNIAILR 183
           +S+DP +LT+SLEN+I P+ +FLK IL +D  +++ +KR+TW+  +D  K L PNI +LR
Sbjct: 151 LSSDPTLLTRSLENQIIPSYNFLKSILLSDEKIVSALKRTTWIFLEDHSKNLIPNIELLR 210

Query: 184 ANGVPNSKILKLLLLSARTFL-RGDRFCEIVEETKRMKFNPSQYAFVRAIHVLSALSKSS 360
             GV +S I  LL       + R D+F +IV+E + M+F+P +  FV A+H +S     S
Sbjct: 211 EAGVLHSCISLLLTHFPEALMQRHDKFSKIVKEVREMEFDPKKSTFVLAVHAISGKGNKS 270

Query: 361 WVAKC-DIYKRWGWSEKEINTAFRLQPACMGLSEKNIMSTMEFLVNKMGYDPLLISEMPI 537
              KC ++Y RWGWS+ +I  AF+  P CM LSEK IM  M+F VNKMG+   +I++ P+
Sbjct: 271 IWNKCFEVYMRWGWSKDDIFAAFKKHPHCMMLSEKKIMKAMDFFVNKMGFPSKVIAQCPV 330

Query: 538 LLLHSLEKR 564
           +L  SLEKR
Sbjct: 331 VLFFSLEKR 339


>ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252802 [Vitis vinifera]
          Length = 399

 Score =  163 bits (413), Expect = 2e-38
 Identities = 94/189 (49%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
 Frame = +1

Query: 1   VISTDPNILTKSLENRIRPAISFLKGILPTDSDVLTVIKRSTWVLNQDPQKRLAPNIAIL 180
           V+ST P IL +SLEN+I P+ +F K  L +D   +TVIKR + +L  D    +A NI  L
Sbjct: 139 VVST-PGILYRSLENQIIPSFNFFKDFLQSDEMAITVIKRFSRILLFDLHTYVASNINAL 197

Query: 181 RANGVPNSKILKLLLLSARTFL-RGDRFCEIVEETKRMKFNPSQYAFVRAIHVLSALSKS 357
           +  GVP S I  LL+     F+ R + F E +EE K+M FNPSQ  FV AIH + A+ KS
Sbjct: 198 QEFGVPKSNIAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAIHAMRAMGKS 257

Query: 358 SWVAKCDIYKRWGWSEKEINTAFRLQPACMGLSEKNIMSTMEFLVNKMGYDPLLISEMPI 537
           +W  K D YKRWGWSE+EI  AF   P CM  SE  IM+TM+F VNKMG +  LI+  P+
Sbjct: 258 TWERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFVNKMGRESSLIARRPL 317

Query: 538 LLLHSLEKR 564
           L+  SLEKR
Sbjct: 318 LIPLSLEKR 326


>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score =  162 bits (411), Expect = 3e-38
 Identities = 88/189 (46%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
 Frame = +1

Query: 1   VISTDPNILTKSLENRIRPAISFLKGILPTDSDVLTVIKRSTWVLNQDPQKRLAPNIAIL 180
           V+S+ P IL++SL+N+I P  +F K IL  D+ V++ IKRS  +  +D  K + PNI  L
Sbjct: 147 VLSSCPMILSRSLDNQIIPCYNFFKSILHLDNRVVSAIKRSPRIFLEDVNKNIVPNITAL 206

Query: 181 RANGVPNSKILKLLLLSARTF-LRGDRFCEIVEETKRMKFNPSQYAFVRAIHVLSALSKS 357
           +  GVP S I+ L+        L+ DRF E V++   M F+P    F++AI V   +SKS
Sbjct: 207 QEIGVPESSIVFLITYYPIVVQLKHDRFGETVKKVMEMGFDPLTVVFIKAIQVFGGMSKS 266

Query: 358 SWVAKCDIYKRWGWSEKEINTAFRLQPACMGLSEKNIMSTMEFLVNKMGYDPLLISEMPI 537
           +W  K ++Y+RWGWS  EI   FR  PACM LSEK IMSTM+FLVNKMG+    I+  PI
Sbjct: 267 TWEQKMEVYRRWGWSNDEIVLLFRAFPACMSLSEKKIMSTMDFLVNKMGWKLTEITRFPI 326

Query: 538 LLLHSLEKR 564
            L  +LEKR
Sbjct: 327 SLGFNLEKR 335


>ref|XP_002276324.1| PREDICTED: uncharacterized protein LOC100256384 [Vitis vinifera]
          Length = 396

 Score =  161 bits (407), Expect = 8e-38
 Identities = 87/189 (46%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
 Frame = +1

Query: 1   VISTDPNILTKSLENRIRPAISFLKGILPTDSDVLTVIKRSTWVLNQDPQKRLAPNIAIL 180
           ++++ P I+ +SLEN++ P+ +F K  L +D   +TV+KR + +L  D    +A N+  L
Sbjct: 142 IVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRILLFDIHTYVASNMNAL 201

Query: 181 RANGVPNSKILKLLLLSARTFL-RGDRFCEIVEETKRMKFNPSQYAFVRAIHVLSALSKS 357
           +  GVP S I  LL      F+ R + F E +EE K+M FNPSQ  FV A+  + A  KS
Sbjct: 202 QEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAVQAIRAGGKS 261

Query: 358 SWVAKCDIYKRWGWSEKEINTAFRLQPACMGLSEKNIMSTMEFLVNKMGYDPLLISEMPI 537
           SW  K DIYK WGWSE+EI  AF   P CM  SE  IM+TM+F VNKMG +  LI+  P+
Sbjct: 262 SWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFVNKMGRESSLIARRPV 321

Query: 538 LLLHSLEKR 564
           L+ HSLEKR
Sbjct: 322 LISHSLEKR 330


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  161 bits (407), Expect = 8e-38
 Identities = 84/189 (44%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
 Frame = +1

Query: 4   ISTDPNILTKSLENRIRPAISFLKGILPTDSDVLTVIKRSTWVLNQDPQKRLAPNIAILR 183
           +S+DP +LT+SLEN+I P+ +FLK IL +D  +++  KR+TW+  +D  K L PN+ +LR
Sbjct: 150 LSSDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLR 209

Query: 184 ANGVPNSKILKLLLLSARTFLRG-DRFCEIVEETKRMKFNPSQYAFVRAIHVLSA-LSKS 357
             GVP S I  LL       +   + F E VEE ++M F+P++  FV A+H L    +KS
Sbjct: 210 KVGVPQSCISLLLTHFPEAMMENHEEFSENVEEVRKMGFDPNKSTFVLAVHALCGKCNKS 269

Query: 358 SWVAKCDIYKRWGWSEKEINTAFRLQPACMGLSEKNIMSTMEFLVNKMGYDPLLISEMPI 537
            W    ++YKRWGW++ +I +AFR  P CM LSEK IM  ++F VNKMG+    I   P+
Sbjct: 270 IWERCFEVYKRWGWTKDDILSAFRKHPHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPV 329

Query: 538 LLLHSLEKR 564
           +L  SLEKR
Sbjct: 330 ILFLSLEKR 338


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