BLASTX nr result
ID: Coptis21_contig00021283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00021283
(675 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucum... 104 7e-26
ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatu... 98 3e-24
ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [G... 98 4e-24
ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [G... 98 1e-23
ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V... 108 1e-21
>ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED:
cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 104 bits (259), Expect(2) = 7e-26
Identities = 59/143 (41%), Positives = 93/143 (65%), Gaps = 7/143 (4%)
Frame = +3
Query: 3 KHFGEHKSKA-----KNGAV*SEAQDCLMNLQIDFKAKMANDLHVGDFLNSSLLETLKFM 167
+H GE+ S K V S A++C++NL+ +F+ +MA+DL+ L + E LKF+
Sbjct: 335 QHQGENLSDGLGKTGKKDPVSSAAEECIINLRSEFQTRMADDLNTAHILTGAFQEALKFI 394
Query: 168 NKALEKLKKGN--QQEPSLIRLFHALENEVKEVLSVLGLMSLSPYSEVLQKFKDRALKRA 341
N L LKK +Q+ S+I+ ++ E++EVL VLGL+S S YSEVLQ+ KD+ALKRA
Sbjct: 395 NSTLTSLKKKQPKKQQLSMIQSLVNVKKELREVLDVLGLLSTSTYSEVLQQLKDKALKRA 454
Query: 342 ELTEEEVKLRIKERSLAREMKDY 410
+ E+++ I+ER+ AR+ K++
Sbjct: 455 GMVEDDILHLIEERTQARKDKNF 477
Score = 38.9 bits (89), Expect(2) = 7e-26
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 413 SDKIRDELRKKGIYLMDVGLQTNWRPSAPLE 505
SD IR +L GI LMDVG +T WRP P+E
Sbjct: 480 SDNIRAKLSSLGIALMDVGRETIWRPCVPVE 510
>ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355481680|gb|AES62883.1| Cysteinyl-tRNA synthetase
[Medicago truncatula]
Length = 552
Score = 97.8 bits (242), Expect(2) = 3e-24
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Frame = +3
Query: 21 KSKAKNGAV*SEAQDCLMNLQIDFKAKMANDLHVGDFLNSSLLETLKFMNKALEKLKKGN 200
+ K K + A++C+ L+ +F+ KM++DL L +L E LKFMN +L+ LKK
Sbjct: 352 EKKEKVPPINDAAKECIKKLKDEFQTKMSDDLQTPVILTGALQEALKFMNGSLKMLKKKM 411
Query: 201 QQEPSL--IRLFHALENEVKEVLSVLGLMSLSPYSEVLQKFKDRALKRAELTEEEVKLRI 374
Q+ L ++ +E E +E+L VLGL+S Y+EVLQ+ KD+ALKRA LTE EV I
Sbjct: 412 QKRAQLQLVQSLLEVEKEAREILKVLGLLSSLSYAEVLQQLKDKALKRAGLTEVEVLKSI 471
Query: 375 KERSLAREMKDY 410
+ER AR KD+
Sbjct: 472 EERRQARINKDF 483
Score = 40.0 bits (92), Expect(2) = 3e-24
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 413 SDKIRDELRKKGIYLMDVGLQTNWRPSAPLEIDIGMSV 526
SD +R +L KGI LMDVG +T WRP P E + +V
Sbjct: 486 SDNVRTDLTAKGIALMDVGNETIWRPCIPSEPLVAQAV 523
>ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 548
Score = 98.2 bits (243), Expect(2) = 4e-24
Identities = 59/135 (43%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +3
Query: 12 GEHKSKAKNGAV*SEAQDCLMNLQIDFKAKMANDLHVGDFLNSSLLETLKFMNKALEKLK 191
GE + K + A++C+ L ++F+ KM++DL L +L E LKF+N +L+ LK
Sbjct: 341 GETEKNEKVPQINEAAKECIKKLNVEFQTKMSDDLQTPVILTGALQEALKFVNTSLKMLK 400
Query: 192 KGNQQEPSLIRLFHALENE--VKEVLSVLGLMSLSPYSEVLQKFKDRALKRAELTEEEVK 365
K Q+ L + LE E V +VL VLGL+S Y+EVLQ+ KD+ALKRA LTE+EV
Sbjct: 401 KKMQKRAQLQLIQSLLEVEKVVGKVLDVLGLLSSKSYAEVLQQLKDKALKRAGLTEDEVL 460
Query: 366 LRIKERSLAREMKDY 410
I ER+ AR KD+
Sbjct: 461 HLIDERTQARINKDF 475
Score = 39.3 bits (90), Expect(2) = 4e-24
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 413 SDKIRDELRKKGIYLMDVGLQTNWRPSAPLE 505
SDK+R +L KGI LMDVG + WRP P E
Sbjct: 478 SDKMRADLATKGIALMDVGNEITWRPCIPSE 508
>ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 553
Score = 97.8 bits (242), Expect(2) = 1e-23
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +3
Query: 12 GEHKSKAKNGAV*SEAQDCLMNLQIDFKAKMANDLHVGDFLNSSLLETLKFMNKALEKLK 191
GE + K + A++C+ L ++F+ KM++DL L +L E LKF+N +L+ LK
Sbjct: 341 GETEKNEKVPQINEAAKECIKKLNVEFQTKMSDDLQTPVILTGALQEALKFVNTSLKMLK 400
Query: 192 KGNQQEPSL--IRLFHALENEVKEVLSVLGLMSLSPYSEVLQKFKDRALKRAELTEEEVK 365
K Q+ L I+ +E EV +VL VLGL+S Y+EVL + KD+AL RA LTE+EV
Sbjct: 401 KKMQKRAQLQLIQSLLEVEKEVGKVLDVLGLLSSKSYAEVLHQLKDKALNRAGLTEDEVL 460
Query: 366 LRIKERSLAREMKDY 410
I+ER+ AR KD+
Sbjct: 461 HLIEERTQARINKDF 475
Score = 38.1 bits (87), Expect(2) = 1e-23
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 413 SDKIRDELRKKGIYLMDVGLQTNWRPSAPLE 505
SDK+R +L KGI LMDVG + WRP P E
Sbjct: 478 SDKMRADLATKGIALMDVGNEIIWRPCIPSE 508
>ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product
[Vitis vinifera]
Length = 513
Score = 108 bits (270), Expect = 1e-21
Identities = 62/128 (48%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Frame = +3
Query: 33 KNGAV*SEAQDCLMNLQIDFKAKMANDLHVGDFLNSSLLETLKFMNKALEKLKKGNQ--Q 206
+N + AQDC+ LQ DF+ KM++DL LN+SL E L+F+N L LKK Q Q
Sbjct: 343 RNVCIAPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQ 402
Query: 207 EPSLIRLFHALENEVKEVLSVLGLMSLSPYSEVLQKFKDRALKRAELTEEEVKLRIKERS 386
+ S + L EVK VLSVLGL+S YSEVLQ+ K +ALKRA + E++V I+ER+
Sbjct: 403 QLSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERA 462
Query: 387 LAREMKDY 410
LAR+ KD+
Sbjct: 463 LARKNKDF 470