BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021278
         (1459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...   470   e-130
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...   451   e-124
ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arab...   429   e-118
ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methy...   426   e-117
ref|NP_171690.1| Ribosomal RNA adenine dimethylase family protei...   426   e-116

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
            vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
            product [Vitis vinifera]
          Length = 335

 Score =  470 bits (1209), Expect = e-130
 Identities = 240/309 (77%), Positives = 269/309 (87%)
 Frame = -1

Query: 1342 TIPQHNIRRSSCIIVLCARSEDDYHATLKALKSKGRTPRKSLGQHYMLNTAINDKLVETA 1163
            ++ Q + R   CI   CARS+DDYHATL AL SKGRTPRKSLGQHYMLN++IN++L +TA
Sbjct: 28   SLVQGSTRTPLCIT--CARSQDDYHATLDALNSKGRTPRKSLGQHYMLNSSINEQLADTA 85

Query: 1162 EVRDGDVVLEIGPGTGSLTNVLLNAGATVIAIEKDPHMAALVKERFASFERFSVLQEDFT 983
            ++RDGDV+LEIGPGTGSLTNVLL+AGATV+AIEKD HMAALV+ERFA  +R  VLQEDF 
Sbjct: 86   DIRDGDVILEIGPGTGSLTNVLLDAGATVLAIEKDAHMAALVRERFAVTDRLKVLQEDFM 145

Query: 982  KCNIRCHMMSLMESRASITKVPRHAKVVSNLPFNISTDVVKQLLPMGDIFSEVVLLLQDE 803
            KC+I  H+ SL+ES+ +  K  R+AKVVSN+PFNISTDVVK LLPMGDIFSEVVLLLQDE
Sbjct: 146  KCHIHPHLFSLLESKKAKNKESRYAKVVSNIPFNISTDVVKILLPMGDIFSEVVLLLQDE 205

Query: 802  TASRLVDASLRTSEYRPINIFVNFYSEPEYKLKVLRTNFFPQPNVDAAVVAFKLKKPSEY 623
            TA RLV+ASLRT EYRPINIFVNFYS+PEYK KV RTNFFPQPNVDAAVV FKLK+  +Y
Sbjct: 206  TALRLVEASLRTQEYRPINIFVNFYSDPEYKFKVPRTNFFPQPNVDAAVVVFKLKQAVDY 265

Query: 622  PAVVSTKSFFSLVNSAFNGKRKMLRRSLQHICTAPEIEEALGNVGVPVTSRPEELTLDDF 443
            P V S KSFFSLVNSAFNGKRKMLRRSLQHICT+ EIEEAL NVG+P TSRPEELTLDDF
Sbjct: 266  PPVSSIKSFFSLVNSAFNGKRKMLRRSLQHICTSIEIEEALRNVGLPATSRPEELTLDDF 325

Query: 442  VRLHNLIVK 416
            VRLHNLIVK
Sbjct: 326  VRLHNLIVK 334


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
            gi|223548969|gb|EEF50458.1| dimethyladenosine
            transferase, putative [Ricinus communis]
          Length = 338

 Score =  451 bits (1160), Expect = e-124
 Identities = 223/303 (73%), Positives = 264/303 (87%), Gaps = 2/303 (0%)
 Frame = -1

Query: 1318 RSSCIIVLC--ARSEDDYHATLKALKSKGRTPRKSLGQHYMLNTAINDKLVETAEVRDGD 1145
            R   +++ C   RS DDY ATLKAL S+GR PRKSLGQHYMLN+ +N++LV  A V +GD
Sbjct: 35   RKKRVLIRCDTKRSSDDYRATLKALNSRGRRPRKSLGQHYMLNSEVNEQLVCAANVEEGD 94

Query: 1144 VVLEIGPGTGSLTNVLLNAGATVIAIEKDPHMAALVKERFASFERFSVLQEDFTKCNIRC 965
            +VLEIGPGTGSLTN+LL+ GATV+AIEKD HMAA+V+ERF+  +RF +LQEDF KC+IR 
Sbjct: 95   LVLEIGPGTGSLTNLLLDTGATVLAIEKDAHMAAIVRERFSHTDRFKLLQEDFVKCHIRF 154

Query: 964  HMMSLMESRASITKVPRHAKVVSNLPFNISTDVVKQLLPMGDIFSEVVLLLQDETASRLV 785
            HM+SL+E+  S+ + PR AKVV+N+PFNISTDVVKQLLPMGDI SEV LLLQ+ETASRLV
Sbjct: 155  HMLSLLENMTSLNEKPRRAKVVANIPFNISTDVVKQLLPMGDIISEVALLLQEETASRLV 214

Query: 784  DASLRTSEYRPINIFVNFYSEPEYKLKVLRTNFFPQPNVDAAVVAFKLKKPSEYPAVVST 605
            ++SLRTSEYRPIN+FVNFYS+P YK KV R+NFFPQPNVDAAVV FKLK+ ++YPAV S+
Sbjct: 215  ESSLRTSEYRPINVFVNFYSDPVYKFKVPRSNFFPQPNVDAAVVTFKLKQTADYPAVSSS 274

Query: 604  KSFFSLVNSAFNGKRKMLRRSLQHICTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNL 425
            KSFFSLVNSAFNGKRKMLRRSLQHICT+PEIE+AL NVG+P TSRPEELTLDDFV+LHNL
Sbjct: 275  KSFFSLVNSAFNGKRKMLRRSLQHICTSPEIEQALINVGLPATSRPEELTLDDFVKLHNL 334

Query: 424  IVK 416
            I +
Sbjct: 335  IAR 337


>ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arabidopsis lyrata subsp.
            lyrata] gi|297335191|gb|EFH65608.1| hypothetical protein
            ARALYDRAFT_470090 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  429 bits (1104), Expect = e-118
 Identities = 217/294 (73%), Positives = 248/294 (84%), Gaps = 1/294 (0%)
 Frame = -1

Query: 1300 VLCARSE-DDYHATLKALKSKGRTPRKSLGQHYMLNTAINDKLVETAEVRDGDVVLEIGP 1124
            V C +S  DDYH+TLK+L S+GR PRKSLGQHYMLN+ IND+L   A+V++GD VLEIGP
Sbjct: 46   VSCGKSSPDDYHSTLKSLNSRGRFPRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGP 105

Query: 1123 GTGSLTNVLLNAGATVIAIEKDPHMAALVKERFASFERFSVLQEDFTKCNIRCHMMSLME 944
            GTGSLTNVL+N GATV+AIEKDPHM  LV ERFA  ++F VLQEDF KC+IR HM+S++E
Sbjct: 106  GTGSLTNVLINLGATVLAIEKDPHMVDLVSERFAGSDKFKVLQEDFVKCHIRSHMLSILE 165

Query: 943  SRASITKVPRHAKVVSNLPFNISTDVVKQLLPMGDIFSEVVLLLQDETASRLVDASLRTS 764
            SR         AKVVSNLPFNISTDVVK LLPMGDIFS+VVLLLQDE A RLV+ +LRTS
Sbjct: 166  SRRLSHPDSSLAKVVSNLPFNISTDVVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTS 225

Query: 763  EYRPINIFVNFYSEPEYKLKVLRTNFFPQPNVDAAVVAFKLKKPSEYPAVVSTKSFFSLV 584
            EYRPINI +NFYSEPEY  +V R NFFPQP VDAAVV FKLK PS+YP V STK+FFSLV
Sbjct: 226  EYRPINILINFYSEPEYNFRVPRENFFPQPKVDAAVVTFKLKHPSDYPDVSSTKNFFSLV 285

Query: 583  NSAFNGKRKMLRRSLQHICTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLI 422
            NSAFNGKRKMLR+SLQHI ++PEIE+ALG  G+PVTSRPEELTLDDFV+LHN+I
Sbjct: 286  NSAFNGKRKMLRKSLQHISSSPEIEKALGVAGLPVTSRPEELTLDDFVKLHNVI 339


>ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Glycine max]
          Length = 341

 Score =  426 bits (1096), Expect = e-117
 Identities = 228/322 (70%), Positives = 257/322 (79%), Gaps = 12/322 (3%)
 Frame = -1

Query: 1345 HTIPQHN----IRRSSCIIVLCA--------RSEDDYHATLKALKSKGRTPRKSLGQHYM 1202
            H  P H+    +RR +  +V CA        RS DDYHATLKAL SKGR PRKSLGQHYM
Sbjct: 23   HHKPAHDSTAGVRRRTPYVV-CAEKGSRASTRSADDYHATLKALNSKGRFPRKSLGQHYM 81

Query: 1201 LNTAINDKLVETAEVRDGDVVLEIGPGTGSLTNVLLNAGATVIAIEKDPHMAALVKERFA 1022
            LN  IND+L   A V  GDVVLEIGPGTGSLTNVLLN+GA V+A+EKD HMAALV ERF+
Sbjct: 82   LNADINDQLAGAAGVEQGDVVLEIGPGTGSLTNVLLNSGAFVLAVEKDKHMAALVSERFS 141

Query: 1021 SFERFSVLQEDFTKCNIRCHMMSLMESRASITKVPRHAKVVSNLPFNISTDVVKQLLPMG 842
            S  +  VL ED  KC++R HM SL+    SI    R AKVV+N+PFNISTDV+K LLPMG
Sbjct: 142  STGKLKVLTEDIVKCHVRSHMSSLV---GSINPESRKAKVVANIPFNISTDVIKLLLPMG 198

Query: 841  DIFSEVVLLLQDETASRLVDASLRTSEYRPINIFVNFYSEPEYKLKVLRTNFFPQPNVDA 662
            DIFSEVVLLLQ+ETA RLV +SLRT EYRPIN+FVNFYS+PEYKL+V RTNFFPQPNVDA
Sbjct: 199  DIFSEVVLLLQEETAVRLVVSSLRTPEYRPINVFVNFYSDPEYKLEVPRTNFFPQPNVDA 258

Query: 661  AVVAFKLKKPSEYPAVVSTKSFFSLVNSAFNGKRKMLRRSLQHICTAPEIEEALGNVGVP 482
            AVV+FKLK PSEYP V STKSFFS+VNSAFN KRKMLR+SLQHICT+ EIEEAL ++G+ 
Sbjct: 259  AVVSFKLKLPSEYPQVSSTKSFFSMVNSAFNEKRKMLRKSLQHICTSLEIEEALTSIGLL 318

Query: 481  VTSRPEELTLDDFVRLHNLIVK 416
             TSRPEELTLDDFV+LHNLI K
Sbjct: 319  ATSRPEELTLDDFVKLHNLIAK 340


>ref|NP_171690.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
            thaliana] gi|3005590|gb|AAC09322.1| dimethyladenosine
            transferase [Arabidopsis thaliana]
            gi|26449914|dbj|BAC42078.1| putative dimethyladenosine
            transferase [Arabidopsis thaliana]
            gi|28827572|gb|AAO50630.1| putative dimethyladenosine
            transferase [Arabidopsis thaliana]
            gi|332189223|gb|AEE27344.1| Ribosomal RNA adenine
            dimethylase family protein [Arabidopsis thaliana]
          Length = 343

 Score =  426 bits (1094), Expect = e-116
 Identities = 214/304 (70%), Positives = 250/304 (82%), Gaps = 1/304 (0%)
 Frame = -1

Query: 1324 IRRSSCIIVLCARSE-DDYHATLKALKSKGRTPRKSLGQHYMLNTAINDKLVETAEVRDG 1148
            + R   + V C +S  DDYH+TLK+L S+GR PRKSLGQHYMLN+ IND+L   A+V++G
Sbjct: 39   LSRRRTVKVSCGKSSPDDYHSTLKSLNSRGRFPRKSLGQHYMLNSDINDQLASAADVKEG 98

Query: 1147 DVVLEIGPGTGSLTNVLLNAGATVIAIEKDPHMAALVKERFASFERFSVLQEDFTKCNIR 968
            D VLEIGPGTGSLTNVL+N GATV+AIEKDPHM  LV ERFA  ++F VLQEDF KC+IR
Sbjct: 99   DFVLEIGPGTGSLTNVLINLGATVLAIEKDPHMVDLVSERFAGSDKFKVLQEDFVKCHIR 158

Query: 967  CHMMSLMESRASITKVPRHAKVVSNLPFNISTDVVKQLLPMGDIFSEVVLLLQDETASRL 788
             HM+S++E+R         AKVVSNLPFNISTDVVK LLPMGDIFS+VVLLLQDE A RL
Sbjct: 159  SHMLSILETRRLSHPDSALAKVVSNLPFNISTDVVKLLLPMGDIFSKVVLLLQDEAALRL 218

Query: 787  VDASLRTSEYRPINIFVNFYSEPEYKLKVLRTNFFPQPNVDAAVVAFKLKKPSEYPAVVS 608
            V+ +LRTSEYRPINI +NFYSEPEY  +V R NFFPQP VDAAVV FKLK P +YP V S
Sbjct: 219  VEPALRTSEYRPINILINFYSEPEYNFRVPRENFFPQPKVDAAVVTFKLKHPRDYPDVSS 278

Query: 607  TKSFFSLVNSAFNGKRKMLRRSLQHICTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHN 428
            TK+FFSLVNSAFNGKRKMLR+SLQHI ++P+IE+ALG  G+P TSRPEELTLDDFV+LHN
Sbjct: 279  TKNFFSLVNSAFNGKRKMLRKSLQHISSSPDIEKALGVAGLPATSRPEELTLDDFVKLHN 338

Query: 427  LIVK 416
            +I +
Sbjct: 339  VIAR 342