BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021276
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22748.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]               68   7e-10

>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +1

Query: 1   IVYSTLVGNLKNAGKLSEAHEIITQMVDKGQYIHLLAKFKGYRRC 135
           +VY+TLVGNL+NAGKL EAHE+I  MVDKGQY+HLL+KFKGYRRC
Sbjct: 474 LVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVHLLSKFKGYRRC 518


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +1

Query: 1   IVYSTLVGNLKNAGKLSEAHEIITQMVDKGQYIHLLAKFKGYRRC 135
           +VY+TLVGNL+NAGKL EAHE+I  MVDKGQY+HLL+KFKGYRRC
Sbjct: 470 LVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVHLLSKFKGYRRC 514


>ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Cucumis sativus]
          Length = 476

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +1

Query: 1   IVYSTLVGNLKNAGKLSEAHEIITQMVDKGQYIHLLAKFKGYRRC 135
           +VYSTLV  L+NAGKL EAH++I QMV+ GQY HL+ KFKGYRRC
Sbjct: 432 LVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476


>ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Cucumis sativus]
          Length = 476

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = +1

Query: 1   IVYSTLVGNLKNAGKLSEAHEIITQMVDKGQYIHLLAKFKGYRRC 135
           +VYSTLV  L+NAGKL EAH++I +MV+ GQY HL+ KFKGYRRC
Sbjct: 432 LVYSTLVSYLRNAGKLGEAHKVIKRMVENGQYAHLMTKFKGYRRC 476


>gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
          Length = 554

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = +1

Query: 1   IVYSTLVGNLKNAGKLSEAHEIITQMVDKGQYIHLLAKFKGYRR 132
           +VYSTLV NLKNAGK+ EAHE++  MV+KG Y+HL++K K YRR
Sbjct: 510 VVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 553