BLASTX nr result

ID: Coptis21_contig00021266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021266
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i...   290   6e-77
ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-l...   286   2e-75
gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana]           285   2e-75
ref|NP_565923.1| putative ABC1 protein [Arabidopsis thaliana] gi...   285   2e-75
ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-l...   285   4e-75

>ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis
           vinifera] gi|297736618|emb|CBI25489.3| unnamed protein
           product [Vitis vinifera]
          Length = 538

 Score =  290 bits (743), Expect = 6e-77
 Identities = 137/169 (81%), Positives = 155/169 (91%)
 Frame = -2

Query: 507 RLQELCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRATMLNKCPVSSYDQVCEVFKKELG 328
           RLQELCFRNGG+YIKLGQHI QLEYLVP EYV  MR +MLN+CPVSSY+QVCEVFKKELG
Sbjct: 91  RLQELCFRNGGLYIKLGQHIGQLEYLVPQEYVQIMRESMLNRCPVSSYEQVCEVFKKELG 150

Query: 327 LKPDEIFLEFDPVPLASASLAQVHAARTRYGGKVVVKVQHTHMTDTAAADYATVEFIVNT 148
             PDE+F EF+P+P+ASASLAQVH ARTR G KV VKVQHTHMTDTAAAD+ATV+ IVNT
Sbjct: 151 RTPDEVFDEFEPIPIASASLAQVHTARTRDGQKVAVKVQHTHMTDTAAADHATVQLIVNT 210

Query: 147 LHRLFPSFDYRWLIDEMRESLPKELDFLVEAKNSEKCLENFRRLSPHLS 1
           LH +FPSFDYRWLI+EM+ESLPKELDFLVEAKNSEKC++NFR+LSPH++
Sbjct: 211 LHWIFPSFDYRWLIEEMQESLPKELDFLVEAKNSEKCVDNFRKLSPHIA 259


>ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  286 bits (731), Expect = 2e-75
 Identities = 134/169 (79%), Positives = 151/169 (89%)
 Frame = -2

Query: 507 RLQELCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRATMLNKCPVSSYDQVCEVFKKELG 328
           +LQ+LCF+NGG+YIKLGQH+ QLEYLVP EYV TMR +MLN+CPVSSY+QVC VFKKELG
Sbjct: 89  KLQDLCFKNGGVYIKLGQHLGQLEYLVPEEYVRTMRESMLNRCPVSSYEQVCNVFKKELG 148

Query: 327 LKPDEIFLEFDPVPLASASLAQVHAARTRYGGKVVVKVQHTHMTDTAAADYATVEFIVNT 148
             PD+IF EFDPVP+ASASLAQVH ART  G KV VKVQHTHMTDTAAAD+ATVE +VNT
Sbjct: 149 DTPDKIFSEFDPVPIASASLAQVHVARTHDGQKVAVKVQHTHMTDTAAADHATVELVVNT 208

Query: 147 LHRLFPSFDYRWLIDEMRESLPKELDFLVEAKNSEKCLENFRRLSPHLS 1
           LHR FPSFDYRWLIDE+ ESLPKELDFL EAKNSE+CLENF +LSPH++
Sbjct: 209 LHRFFPSFDYRWLIDEISESLPKELDFLTEAKNSERCLENFHKLSPHIA 257


>gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana]
          Length = 538

 Score =  285 bits (730), Expect = 2e-75
 Identities = 134/169 (79%), Positives = 151/169 (89%)
 Frame = -2

Query: 507 RLQELCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRATMLNKCPVSSYDQVCEVFKKELG 328
           +LQELCF+NGGIYIKLGQHI QLEYLVP EYV TMR +MLNKCP+SSY+QVCEVFKKE+G
Sbjct: 91  KLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVRTMRESMLNKCPISSYEQVCEVFKKEVG 150

Query: 327 LKPDEIFLEFDPVPLASASLAQVHAARTRYGGKVVVKVQHTHMTDTAAADYATVEFIVNT 148
             PD++F EFDPVP+ASASLAQVH ART  G KV VKVQH HMTDTAAAD A V  +VNT
Sbjct: 151 EMPDQVFAEFDPVPIASASLAQVHVARTHDGKKVAVKVQHAHMTDTAAADTAAVGVLVNT 210

Query: 147 LHRLFPSFDYRWLIDEMRESLPKELDFLVEAKNSEKCLENFRRLSPHLS 1
           LHR+FPSFDYRWL+DEM ESLPKELDFLVEAKN+EKCL+NFR+LSPH++
Sbjct: 211 LHRIFPSFDYRWLLDEMSESLPKELDFLVEAKNNEKCLDNFRKLSPHIA 259


>ref|NP_565923.1| putative ABC1 protein [Arabidopsis thaliana]
           gi|49066033|sp|O04212.2|Y2090_ARATH RecName:
           Full=Putative ABC1 protein At2g40090; Flags: Precursor
           gi|51969458|dbj|BAD43421.1| ABC transporter like protein
           [Arabidopsis thaliana] gi|51970216|dbj|BAD43800.1| ABC
           transporter like protein [Arabidopsis thaliana]
           gi|330254682|gb|AEC09776.1| putative ABC1 protein
           [Arabidopsis thaliana]
          Length = 538

 Score =  285 bits (730), Expect = 2e-75
 Identities = 134/169 (79%), Positives = 151/169 (89%)
 Frame = -2

Query: 507 RLQELCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRATMLNKCPVSSYDQVCEVFKKELG 328
           +LQELCF+NGGIYIKLGQHI QLEYLVP EYV TMR +MLNKCP+SSY+QVCEVFKKE+G
Sbjct: 91  KLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVRTMRESMLNKCPISSYEQVCEVFKKEVG 150

Query: 327 LKPDEIFLEFDPVPLASASLAQVHAARTRYGGKVVVKVQHTHMTDTAAADYATVEFIVNT 148
             PD++F EFDPVP+ASASLAQVH ART  G KV VKVQH HMTDTAAAD A V  +VNT
Sbjct: 151 EMPDQVFAEFDPVPIASASLAQVHVARTHDGKKVAVKVQHAHMTDTAAADTAAVGVLVNT 210

Query: 147 LHRLFPSFDYRWLIDEMRESLPKELDFLVEAKNSEKCLENFRRLSPHLS 1
           LHR+FPSFDYRWL+DEM ESLPKELDFLVEAKN+EKCL+NFR+LSPH++
Sbjct: 211 LHRIFPSFDYRWLLDEMSESLPKELDFLVEAKNNEKCLDNFRKLSPHIA 259


>ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  285 bits (728), Expect = 4e-75
 Identities = 133/169 (78%), Positives = 151/169 (89%)
 Frame = -2

Query: 507 RLQELCFRNGGIYIKLGQHIAQLEYLVPAEYVHTMRATMLNKCPVSSYDQVCEVFKKELG 328
           +LQ+LCF+NGG+YIKLGQH+ QLEYLVP EYV TMR +MLN+CPVSSY+QVC VFKKELG
Sbjct: 89  KLQDLCFKNGGVYIKLGQHLGQLEYLVPEEYVQTMRESMLNRCPVSSYEQVCNVFKKELG 148

Query: 327 LKPDEIFLEFDPVPLASASLAQVHAARTRYGGKVVVKVQHTHMTDTAAADYATVEFIVNT 148
             PD+IF EFDPVP+ASASLAQVH ART  G KV VKVQHTHMTDTAAAD+ATVE +VNT
Sbjct: 149 DTPDKIFSEFDPVPIASASLAQVHVARTHDGQKVAVKVQHTHMTDTAAADHATVELVVNT 208

Query: 147 LHRLFPSFDYRWLIDEMRESLPKELDFLVEAKNSEKCLENFRRLSPHLS 1
           LHR FPSFDYRWLIDE+ ESLPKELDFL EAKNSE+C+ENF +LSPH++
Sbjct: 209 LHRFFPSFDYRWLIDEISESLPKELDFLTEAKNSERCVENFHKLSPHIA 257


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