BLASTX nr result

ID: Coptis21_contig00021251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021251
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17900.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27...    85   5e-15
emb|CAN77367.1| hypothetical protein VITISV_010740 [Vitis vinifera]    85   5e-15
ref|XP_002332820.1| cc-nbs-lrr resistance protein [Populus trich...    83   2e-14
ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trich...    82   4e-14

>emb|CBI17900.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
 Frame = +2

Query: 2   LEEARNRLHSTIEKLISSCLLIKD--ENGVIMMHDVVRDVAISIA-SEEGTGFIVKAGMR 172
           +EEAR R  S + K + +C L+ D  E G + MHDVVRD+AI +A SEE   F+V++G  
Sbjct: 440 IEEARGRARSVV-KYLKACSLLLDSTEEGGVKMHDVVRDMAILLASSEEDNAFMVQSGSA 498

Query: 173 SEEWPDIELEKWEKCKRFSLMDTTIRCGIPNQIKAPQLLTLSLHSCK--MEIPHDFFKEM 346
            +EWP    + +E     SLM   I   +P+ +  P+L TL L +     EIP DFF   
Sbjct: 499 LKEWP--TKDSYEAYTAISLMSNEIE-ELPDGLVCPKLQTLLLQNNNDIQEIPDDFFGSF 555

Query: 347 KSLSTLDLSRTDIHSLP 397
            SL  LDL+  DI SLP
Sbjct: 556 HSLRVLDLNGADIPSLP 572


>ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 1063

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
 Frame = +2

Query: 2   LEEARNRLHSTIEKLISSCLLIKD--ENGVIMMHDVVRDVAISIA-SEEGTGFIVKAGMR 172
           +EEAR R  S + K + +C L+ D  E G + MHDVVRD+AI +A SEE   F+V++G  
Sbjct: 440 IEEARGRARSVV-KYLKACSLLLDSTEEGGVKMHDVVRDMAILLASSEEDNAFMVQSGSA 498

Query: 173 SEEWPDIELEKWEKCKRFSLMDTTIRCGIPNQIKAPQLLTLSLHSCK--MEIPHDFFKEM 346
            +EWP    + +E     SLM   I   +P+ +  P+L TL L +     EIP DFF   
Sbjct: 499 LKEWP--TKDSYEAYTAISLMSNEIE-ELPDGLVCPKLQTLLLQNNNDIQEIPDDFFGSF 555

Query: 347 KSLSTLDLSRTDIHSLP 397
            SL  LDL+  DI SLP
Sbjct: 556 HSLRVLDLNGADIPSLP 572


>emb|CAN77367.1| hypothetical protein VITISV_010740 [Vitis vinifera]
          Length = 975

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 58/137 (42%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
 Frame = +2

Query: 2   LEEARNRLHSTIEKLISSCLLIKD--ENGVIMMHDVVRDVAISIA-SEEGTGFIVKAGMR 172
           +EEAR R  S + K + +C L+ D  E G + MHDVVRD+AI +A SEE   F+V++G  
Sbjct: 349 IEEARGRARSVV-KYLKACSLLLDSTEEGGVKMHDVVRDMAILLASSEEDNAFMVQSGSA 407

Query: 173 SEEWPDIELEKWEKCKRFSLMDTTIRCGIPNQIKAPQLLTLSLHSCK--MEIPHDFFKEM 346
            +EWP    + +E     SLM   I   +P+ +  P+L TL L +     EIP DFF   
Sbjct: 408 LKEWP--TKDSYEAYTAISLMSNEIE-ELPDGLVCPKLQTLLLQNNNDIQEIPDDFFGSF 464

Query: 347 KSLSTLDLSRTDIHSLP 397
            SL  LDL+  DI SLP
Sbjct: 465 HSLRVLDLNGADIPSLP 481


>ref|XP_002332820.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834208|gb|EEE72685.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 655

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
 Frame = +2

Query: 8   EARNRLHSTIEKLISSCLLIKDENGV-IMMHDVVRDVAISIASEEGTGFIVKAGMRSEEW 184
           +AR R++  I+KL   C+L+  E    + MHD+VRDVAI IAS +  GFI+KAG+  +EW
Sbjct: 440 DARKRVYVEIKKLKDCCMLLDTETDEHVKMHDLVRDVAIRIASSQEYGFIIKAGIGLKEW 499

Query: 185 PDIELEKWEKCKRFSLMDTTIRCGIPNQIKAPQLLTLSLH-SCKMEIPHDFFKEMKSLST 361
           P + ++ +E C   SLM   +   +P  ++ PQL  L L     M +P  FF+ MK +  
Sbjct: 500 P-MSIKSFEACTTISLMGNKL-TELPEGLECPQLKVLLLEVDYGMNVPERFFEGMKEIEV 557

Query: 362 LDL 370
           L L
Sbjct: 558 LSL 560


>ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834210|gb|EEE72687.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 817

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 51/125 (40%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
 Frame = +2

Query: 2   LEEARNRLHSTIEKLISSCLLIKDENGV-IMMHDVVRDVAISIASEEGTGFIVKAGMRSE 178
           +E+AR ++H  IE L + CLL+  E    + MHD+VRDVAI IAS E  GF+VK G+  +
Sbjct: 273 IEDAREQVHVAIEYLKACCLLLGTETEEHVRMHDLVRDVAIQIASSEEYGFMVKVGIGLK 332

Query: 179 EWPDIELEKWEKCKRFSLMDTTIRCGIPNQIKAPQLLTLSLH-SCKMEIPHDFFKEMKSL 355
           EWP +  + +E C   SLM   +   +P  +  PQL  L L     M +P  FF+ MK +
Sbjct: 333 EWP-MSNKSFEGCTTISLMGNKL-AKLPEGLVCPQLKVLLLELDDGMNVPEKFFEGMKEI 390

Query: 356 STLDL 370
             L L
Sbjct: 391 EVLSL 395


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