BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021248
         (1955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634397.1| PREDICTED: putative transcription elongation...   636   e-180
ref|XP_002265283.2| PREDICTED: putative transcription elongation...   636   e-180
emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]   636   e-180
ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis...   621   e-175
ref|XP_004148818.1| PREDICTED: putative transcription elongation...   619   e-174

>ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like isoform 2 [Vitis vinifera]
          Length = 1044

 Score =  636 bits (1640), Expect = e-180
 Identities = 339/516 (65%), Positives = 392/516 (75%), Gaps = 8/516 (1%)
 Frame = +3

Query: 432  FIVDSGAELQEEVDGRRKERRPFFPQXXXXXXXXXXXQTIQNRYGPE-YGDYDDEIN-VE 605
            FIVD+GAEL +E DG+R  RRP  PQ           + IQ RYG   + +YD+E   VE
Sbjct: 105  FIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFEALERKIQERYGKSSHAEYDEETTEVE 164

Query: 606  QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSAIALDHLKNYIYVEA 785
            QQALLPSV+DPKLW+VKC IGHEREAAV LMQKS +KG  VQIRSAIALDHLKNYIY+EA
Sbjct: 165  QQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKSIDKGPEVQIRSAIALDHLKNYIYIEA 224

Query: 786  DKEAHVKEACKGLRNIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 965
            DKEAHVKEACKGLRNIY+ KV+ VPI+EMTDVLSVESKA+D+SR++WVRMK G YKGD+A
Sbjct: 225  DKEAHVKEACKGLRNIYAQKVMLVPIREMTDVLSVESKAVDLSRNTWVRMKIGTYKGDLA 284

Query: 966  XXXXXXXXXXXXXXXLIPRIDFQSLANKLDGREFV-KKKIVPAQRPMNIDEAREMHIRVV 1142
                           LIPRID Q+LANKL+GRE V KK   P  R MN++EAREMHIRV 
Sbjct: 285  KVVDVDNVRQRVTVQLIPRIDLQALANKLEGREVVTKKAFKPPPRFMNVEEAREMHIRVE 344

Query: 1143 SRRDPITGDYFENIADMMFKDGFLFKTVSMRSISSQNIQPTFDEFEKFWKP-KDRYYDIA 1319
             RRDP+TGDYFENI  MMFKDGFL+KTVSM+SIS QNIQPTFDE EKF  P +    D+A
Sbjct: 345  RRRDPMTGDYFENIGGMMFKDGFLYKTVSMKSISVQNIQPTFDELEKFRTPGETEDGDMA 404

Query: 1320 SFSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWVEKVEDEIVHIRLKMKGLHETICINEK 1499
            S STL  +R+K HFMKGDAV+I++GDLK+L GWVEKVE+E VHIR +MKGL +T+ +NEK
Sbjct: 405  SLSTLFANRKKGHFMKGDAVIIVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNEK 464

Query: 1500 SLCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXXXX 1679
             LCKYF+PG+HVKVVSG +EG TGMV+KVEGHVLII+SD TKE +RVF+D          
Sbjct: 465  ELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDVVESSEVTS 524

Query: 1680 XXXRLGDYELHDFVVLDN-GFGVIIRVESEAFQVLTGNANKPEVVFVKLREIKRKIEHRF 1856
               R+GDYELHD V+LDN  FGVIIRVESEAFQVL G  ++PEVV VKLREIK KI+ R 
Sbjct: 525  GVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREIKFKIDKRV 584

Query: 1857 S---RANNIFCEKDVVRIGKGPYKGKQGSVERIHGG 1955
            +   R  N    KDVVRI  GP KGKQG VE I+ G
Sbjct: 585  NVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHIYKG 620


>ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like isoform 1 [Vitis vinifera]
            gi|302142757|emb|CBI19960.3| unnamed protein product
            [Vitis vinifera]
          Length = 1034

 Score =  636 bits (1640), Expect = e-180
 Identities = 339/516 (65%), Positives = 392/516 (75%), Gaps = 8/516 (1%)
 Frame = +3

Query: 432  FIVDSGAELQEEVDGRRKERRPFFPQXXXXXXXXXXXQTIQNRYGPE-YGDYDDEIN-VE 605
            FIVD+GAEL +E DG+R  RRP  PQ           + IQ RYG   + +YD+E   VE
Sbjct: 105  FIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFEALERKIQERYGKSSHAEYDEETTEVE 164

Query: 606  QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSAIALDHLKNYIYVEA 785
            QQALLPSV+DPKLW+VKC IGHEREAAV LMQKS +KG  VQIRSAIALDHLKNYIY+EA
Sbjct: 165  QQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKSIDKGPEVQIRSAIALDHLKNYIYIEA 224

Query: 786  DKEAHVKEACKGLRNIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 965
            DKEAHVKEACKGLRNIY+ KV+ VPI+EMTDVLSVESKA+D+SR++WVRMK G YKGD+A
Sbjct: 225  DKEAHVKEACKGLRNIYAQKVMLVPIREMTDVLSVESKAVDLSRNTWVRMKIGTYKGDLA 284

Query: 966  XXXXXXXXXXXXXXXLIPRIDFQSLANKLDGREFV-KKKIVPAQRPMNIDEAREMHIRVV 1142
                           LIPRID Q+LANKL+GRE V KK   P  R MN++EAREMHIRV 
Sbjct: 285  KVVDVDNVRQRVTVQLIPRIDLQALANKLEGREVVTKKAFKPPPRFMNVEEAREMHIRVE 344

Query: 1143 SRRDPITGDYFENIADMMFKDGFLFKTVSMRSISSQNIQPTFDEFEKFWKP-KDRYYDIA 1319
             RRDP+TGDYFENI  MMFKDGFL+KTVSM+SIS QNIQPTFDE EKF  P +    D+A
Sbjct: 345  RRRDPMTGDYFENIGGMMFKDGFLYKTVSMKSISVQNIQPTFDELEKFRTPGETEDGDMA 404

Query: 1320 SFSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWVEKVEDEIVHIRLKMKGLHETICINEK 1499
            S STL  +R+K HFMKGDAV+I++GDLK+L GWVEKVE+E VHIR +MKGL +T+ +NEK
Sbjct: 405  SLSTLFANRKKGHFMKGDAVIIVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNEK 464

Query: 1500 SLCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXXXX 1679
             LCKYF+PG+HVKVVSG +EG TGMV+KVEGHVLII+SD TKE +RVF+D          
Sbjct: 465  ELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDVVESSEVTS 524

Query: 1680 XXXRLGDYELHDFVVLDN-GFGVIIRVESEAFQVLTGNANKPEVVFVKLREIKRKIEHRF 1856
               R+GDYELHD V+LDN  FGVIIRVESEAFQVL G  ++PEVV VKLREIK KI+ R 
Sbjct: 525  GVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREIKFKIDKRV 584

Query: 1857 S---RANNIFCEKDVVRIGKGPYKGKQGSVERIHGG 1955
            +   R  N    KDVVRI  GP KGKQG VE I+ G
Sbjct: 585  NVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHIYKG 620


>emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]
          Length = 1107

 Score =  636 bits (1640), Expect = e-180
 Identities = 339/516 (65%), Positives = 392/516 (75%), Gaps = 8/516 (1%)
 Frame = +3

Query: 432  FIVDSGAELQEEVDGRRKERRPFFPQXXXXXXXXXXXQTIQNRYGPE-YGDYDDEIN-VE 605
            FIVD+GAEL +E DG+R  RRP  PQ           + IQ RYG   + +YD+E   VE
Sbjct: 105  FIVDAGAELPDEDDGQRMRRRPLLPQEDEQEDFEALERKIQERYGKSSHAEYDEETTEVE 164

Query: 606  QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSAIALDHLKNYIYVEA 785
            QQALLPSV+DPKLW+VKC IGHEREAAV LMQKS +KG  VQIRSAIALDHLKNYIY+EA
Sbjct: 165  QQALLPSVRDPKLWMVKCAIGHEREAAVCLMQKSIDKGPEVQIRSAIALDHLKNYIYIEA 224

Query: 786  DKEAHVKEACKGLRNIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 965
            DKEAHVKEACKGLRNIY+ KV+ VPI+EMTDVLSVESKA+D+SR++WVRMK G YKGD+A
Sbjct: 225  DKEAHVKEACKGLRNIYAQKVMLVPIREMTDVLSVESKAVDLSRNTWVRMKIGTYKGDLA 284

Query: 966  XXXXXXXXXXXXXXXLIPRIDFQSLANKLDGREFV-KKKIVPAQRPMNIDEAREMHIRVV 1142
                           LIPRID Q+LANKL+GRE V KK   P  R MN++EAREMHIRV 
Sbjct: 285  KVVDVDNVRQRVTVQLIPRIDLQALANKLEGREVVTKKAFKPPPRFMNVEEAREMHIRVE 344

Query: 1143 SRRDPITGDYFENIADMMFKDGFLFKTVSMRSISSQNIQPTFDEFEKFWKP-KDRYYDIA 1319
             RRDP+TGDYFENI  MMFKDGFL+KTVSM+SIS QNIQPTFDE EKF  P +    D+A
Sbjct: 345  RRRDPMTGDYFENIGGMMFKDGFLYKTVSMKSISVQNIQPTFDELEKFRTPGETEDGDMA 404

Query: 1320 SFSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWVEKVEDEIVHIRLKMKGLHETICINEK 1499
            S STL  +R+K HFMKGDAV+I++GDLK+L GWVEKVE+E VHIR +MKGL +T+ +NEK
Sbjct: 405  SLSTLFANRKKGHFMKGDAVIIVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNEK 464

Query: 1500 SLCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXXXX 1679
             LCKYF+PG+HVKVVSG +EG TGMV+KVEGHVLII+SD TKE +RVF+D          
Sbjct: 465  ELCKYFEPGNHVKVVSGTQEGATGMVVKVEGHVLIILSDTTKEHLRVFADDVVESSEVTS 524

Query: 1680 XXXRLGDYELHDFVVLDN-GFGVIIRVESEAFQVLTGNANKPEVVFVKLREIKRKIEHRF 1856
               R+GDYELHD V+LDN  FGVIIRVESEAFQVL G  ++PEVV VKLREIK KI+ R 
Sbjct: 525  GVTRIGDYELHDLVLLDNLSFGVIIRVESEAFQVLKGVPDRPEVVLVKLREIKFKIDKRV 584

Query: 1857 S---RANNIFCEKDVVRIGKGPYKGKQGSVERIHGG 1955
            +   R  N    KDVVRI  GP KGKQG VE I+ G
Sbjct: 585  NVQDRFKNTVSVKDVVRILDGPCKGKQGPVEHIYKG 620


>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
            gi|223534550|gb|EEF36249.1| suppressor of ty, putative
            [Ricinus communis]
          Length = 1045

 Score =  621 bits (1602), Expect = e-175
 Identities = 328/515 (63%), Positives = 385/515 (74%), Gaps = 7/515 (1%)
 Frame = +3

Query: 432  FIVDSGAELQEEVDGRRKERRPFFPQXXXXXXXXXXXQTIQNRYG-PEYGDYDDEIN-VE 605
            FIVD+GA+L +E DGRR  RRP  P+           + IQ RY    + +YD+E   VE
Sbjct: 113  FIVDNGADLPDEDDGRRVHRRPLLPREDDQEDMEALERRIQARYARSSHTEYDEETTEVE 172

Query: 606  QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSAIALDHLKNYIYVEA 785
            QQALLPSV+DPKLW+VKC IG ERE AV LMQK  +KGS +QIRSAIALDHLKNYIY+EA
Sbjct: 173  QQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSAIALDHLKNYIYIEA 232

Query: 786  DKEAHVKEACKGLRNIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 965
            DKEAHV+EACKGLRNIY+ K++ VPIKEMTDVLSVESKAID+SRD+WVRMK G YKGD+A
Sbjct: 233  DKEAHVREACKGLRNIYAQKIMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 292

Query: 966  XXXXXXXXXXXXXXXLIPRIDFQSLANKLDGREFVKKK-IVPAQRPMNIDEAREMHIRVV 1142
                           LIPRID Q+LANKL+GRE  KKK  VP  R MN+DEARE+HIRV 
Sbjct: 293  KVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNVDEARELHIRVE 352

Query: 1143 SRRDPITGDYFENIADMMFKDGFLFKTVSMRSISSQNIQPTFDEFEKFWKPKDRYYDIAS 1322
             RRDP++GDYFENI  M+FKDGFL+KTVSM+SIS QNI+PTFDE EKF KP +   DI  
Sbjct: 353  RRRDPMSGDYFENIGGMLFKDGFLYKTVSMKSISVQNIKPTFDELEKFRKPGENDGDIVG 412

Query: 1323 FSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWVEKVEDEIVHIRLKMKGLHETICINEKS 1502
             STL  +R+K HF+KGDAV+I++GDLK+L GWVEKV++E VHI+ +MK L  TI +NEK 
Sbjct: 413  LSTLFANRKKGHFVKGDAVIIVKGDLKNLKGWVEKVDEENVHIKPEMKDLPRTIAVNEKE 472

Query: 1503 LCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXXXXX 1682
            LCKYF+PG+HVKVVSG +EG TGMV+KVE HVLII+SD TKE IRVF+D           
Sbjct: 473  LCKYFEPGNHVKVVSGTQEGATGMVVKVEQHVLIILSDTTKEHIRVFADDVVESSEVTTG 532

Query: 1683 XXRLGDYELHDFVVLDN-GFGVIIRVESEAFQVLTGNANKPEVVFVKLREIKRKIEHRFS 1859
              ++GDYELHD V+LDN  FGVIIRVESEAFQVL G   +PEV  V+LREIK KIE +F+
Sbjct: 533  VTKIGDYELHDLVLLDNMSFGVIIRVESEAFQVLKGVPERPEVALVRLREIKCKIEKKFN 592

Query: 1860 ---RANNIFCEKDVVRIGKGPYKGKQGSVERIHGG 1955
               R  N    KDVVRI  GP KGKQG VE I+ G
Sbjct: 593  VQDRYKNTIAVKDVVRIIDGPCKGKQGPVEHIYKG 627


>ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Cucumis sativus]
          Length = 1044

 Score =  619 bits (1595), Expect = e-174
 Identities = 327/516 (63%), Positives = 389/516 (75%), Gaps = 8/516 (1%)
 Frame = +3

Query: 432  FIVDSGAELQEEVDGRRKERRPFFPQXXXXXXXXXXXQTIQNRYG-PEYGDYDDEIN-VE 605
            FIVD+ A++ +E D RR  RRP  P+           + IQ RY    + +YD+E   VE
Sbjct: 109  FIVDNVADIPDEDDNRRMHRRPLLPREDEQEDVEALERRIQARYARSNHMEYDEETTEVE 168

Query: 606  QQALLPSVKDPKLWIVKCLIGHEREAAVSLMQKSFNKGSVVQIRSAIALDHLKNYIYVEA 785
            QQALLPSV+DPKLW+VKC IG EREAAV LMQK  ++G  +QIRSA+ALDHLKN+IY+EA
Sbjct: 169  QQALLPSVRDPKLWMVKCAIGREREAAVCLMQKCIDRGPEMQIRSAVALDHLKNFIYIEA 228

Query: 786  DKEAHVKEACKGLRNIYSAKVVQVPIKEMTDVLSVESKAIDISRDSWVRMKTGIYKGDIA 965
            DKEAHV+EACKGLRNIY+ K+  VPIKEMTDVLSVESKAID+SRD+WVRMK G YKGD+A
Sbjct: 229  DKEAHVREACKGLRNIYAQKITLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLA 288

Query: 966  XXXXXXXXXXXXXXXLIPRIDFQSLANKLDGREFVKKK-IVPAQRPMNIDEAREMHIRVV 1142
                           LIPRID Q+LANKL+GRE  KKK  VP  R MNIDEARE+HIRV 
Sbjct: 289  KVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIRVE 348

Query: 1143 SRRDPITGDYFENIADMMFKDGFLFKTVSMRSISSQNIQPTFDEFEKFWKP-KDRYYDIA 1319
             RRDPITG+YFENI  M FKDGFL+KTVSM+SIS+QNI+PTFDE EKF KP ++   DIA
Sbjct: 349  RRRDPITGEYFENIGGMFFKDGFLYKTVSMKSISAQNIKPTFDELEKFRKPGENGDGDIA 408

Query: 1320 SFSTLAVSRRKCHFMKGDAVVIIEGDLKDLMGWVEKVEDEIVHIRLKMKGLHETICINEK 1499
            S STL  +R+K HFMKGDAV++++GDLK+L GWVEKVE+E VHIR +MKGL +T+ +NE+
Sbjct: 409  SLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGWVEKVEEENVHIRPEMKGLPKTLAVNER 468

Query: 1500 SLCKYFKPGDHVKVVSGAREGVTGMVIKVEGHVLIIVSDITKEDIRVFSDHXXXXXXXXX 1679
             LCKYF+PG+HVKVVSG +EG TGMV+KV+ HVLII+SD TKE IRVF+D          
Sbjct: 469  ELCKYFEPGNHVKVVSGTQEGATGMVVKVDQHVLIILSDTTKEHIRVFADDVVESSEVTT 528

Query: 1680 XXXRLGDYELHDFVVLDN-GFGVIIRVESEAFQVLTGNANKPEVVFVKLREIKRKIEHRF 1856
               R+GDYELHD V+LDN  FGVIIRVE+EAFQVL G  ++PEV  VKLREIK KI+ + 
Sbjct: 529  GVTRIGDYELHDLVLLDNMSFGVIIRVETEAFQVLKGTPDRPEVDIVKLREIKSKIDKKI 588

Query: 1857 S---RANNIFCEKDVVRIGKGPYKGKQGSVERIHGG 1955
            S   R NN    KDVVRI +GP KGKQG VE I+ G
Sbjct: 589  SVQDRFNNTISSKDVVRILEGPCKGKQGPVEHIYRG 624