BLASTX nr result
ID: Coptis21_contig00021243
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00021243 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|2... 240 8e-62 ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi... 228 4e-58 ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana] ... 225 3e-57 ref|NP_001189950.1| uncharacterized protein [Arabidopsis thalian... 225 3e-57 ref|XP_002885518.1| pentatricopeptide repeat-containing protein ... 224 6e-57 >ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa] Length = 845 Score = 240 bits (613), Expect = 8e-62 Identities = 117/162 (72%), Positives = 135/162 (83%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 DKVTMV VASACGYLGALDLAKW+H YI+ +I DM L TALVDM+ARCGDPQS+MQVF Sbjct: 472 DKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVF 531 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACSHSGLVE 365 +KM ++DVSAWTA+IGAMAMEG+G AI LFDEM++QG+KPDGV F+ +LTA SH GLVE Sbjct: 532 NKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVE 591 Query: 366 EGQRFFRSMKDDYGSPPKVVHYGCMVDLLGRAGMLKEAHKFI 491 +G FRSMKD YG P+ VHYGCMVDLLGRAG+L EA I Sbjct: 592 QGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLI 633 Score = 79.3 bits (194), Expect = 3e-13 Identities = 47/160 (29%), Positives = 80/160 (50%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 D T V SAC AL VH I DM + +L+ Y CG+ +VF Sbjct: 138 DNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVF 197 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACSHSGLVE 365 KM E++V +WT+ IG A G ++A+ LF EM++ G++P+ V +GV++AC+ ++ Sbjct: 198 DKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQ 257 Query: 366 EGQRFFRSMKDDYGSPPKVVHYGCMVDLLGRAGMLKEAHK 485 G++ + + + +VD+ + G + +A K Sbjct: 258 LGEQVCTCI-GELELEVNALMVNALVDMYMKCGAIDKARK 296 Score = 73.6 bits (179), Expect = 2e-11 Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 36/189 (19%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARC---------- 155 D++TM+S SAC L + KW H Y+ N + + A+++MY +C Sbjct: 340 DRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVF 399 Query: 156 ---------------------GDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAII 272 GD +S+ ++F M + D+ +W IGA+ E ++AI Sbjct: 400 DRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIE 459 Query: 273 LFDEMIKQGVKPDGVAFLGVLTACSHSGLVEEGQRFFRSMKDDYGSPPKVVHYG-----C 437 LF M +G+ D V +GV +AC + G ++ + +K K +H+ Sbjct: 460 LFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIK------KKDIHFDMHLGTA 513 Query: 438 MVDLLGRAG 464 +VD+ R G Sbjct: 514 LVDMFARCG 522 Score = 67.0 bits (162), Expect = 2e-09 Identities = 35/114 (30%), Positives = 59/114 (51%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 + VTMV V SAC L L L + V I E+ + + ALVDMY +CG + ++F Sbjct: 239 NSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIF 298 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACS 347 + +K++ + + +G + + + EM+K G +PD + L ++ACS Sbjct: 299 DECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACS 352 >ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690 [Vitis vinifera] Length = 836 Score = 228 bits (581), Expect = 4e-58 Identities = 111/163 (68%), Positives = 134/163 (82%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 D+VTM+ +ASACGYLGA +LAKWVH YIE N I CDM L+TALVDM+ARCGDPQS+MQVF Sbjct: 464 DRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVF 523 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACSHSGLVE 365 +KM E+DVSAWTA+IG MAMEG+GE A LF++M+ QGVKPD V F+ VLTACSH G VE Sbjct: 524 NKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVE 583 Query: 366 EGQRFFRSMKDDYGSPPKVVHYGCMVDLLGRAGMLKEAHKFIK 494 +G F S+ +D+G P++ HYGCMVDLLGRAG+L+EA IK Sbjct: 584 QGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIK 625 Score = 69.3 bits (168), Expect = 3e-10 Identities = 36/110 (32%), Positives = 62/110 (56%) Frame = +3 Query: 12 VTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVFHK 191 VTMV V SAC L LD+ + V YI + + + ALVDMY +CG ++ ++F + Sbjct: 233 VTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDE 292 Query: 192 MREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTA 341 ++++ + + A +G +A+ + DEM++QG +PD V L ++A Sbjct: 293 CVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 342 Score = 66.6 bits (161), Expect = 2e-09 Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 31/184 (16%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDP------- 164 D+VTM+S SA L L K H Y+ N + + ++DMY +CG P Sbjct: 332 DRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVF 391 Query: 165 ------------------------QSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAII 272 +S+ +VF+++ E++ W I + + E AI Sbjct: 392 DLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIE 451 Query: 273 LFDEMIKQGVKPDGVAFLGVLTACSHSGLVEEGQRFFRSMKDDYGSPPKVVHYGCMVDLL 452 LF EM +G+K D V +G+ +AC + G E ++ + + G P + +VD+ Sbjct: 452 LFREMQGEGIKADRVTMMGIASACGYLG-APELAKWVHTYIEKNGIPCDMRLNTALVDMF 510 Query: 453 GRAG 464 R G Sbjct: 511 ARCG 514 Score = 64.3 bits (155), Expect = 1e-08 Identities = 41/157 (26%), Positives = 73/157 (46%) Frame = +3 Query: 15 TMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVFHKM 194 T V S C + A VH + + D+ + L+ YA CG +VF M Sbjct: 133 TFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGM 192 Query: 195 REKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACSHSGLVEEGQ 374 E++V +WT+ I A ++A+ LF EM++ G++P V + V++AC+ ++ G+ Sbjct: 193 SERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGE 252 Query: 375 RFFRSMKDDYGSPPKVVHYGCMVDLLGRAGMLKEAHK 485 R + + G V +VD+ + G + A + Sbjct: 253 RVCAYI-GELGLKLNKVMVNALVDMYMKCGAIDAAKR 288 >ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana] gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana] Length = 938 Score = 225 bits (573), Expect = 3e-57 Identities = 105/163 (64%), Positives = 135/163 (82%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 D VTM+S+ASACG+LGALDLAKW++YYIE N I D+ L T LVDM++RCGDP+S+M +F Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACSHSGLVE 365 + + +DVSAWTA+IGAMAM G+ E+AI LFD+MI+QG+KPDGVAF+G LTACSH GLV+ Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588 Query: 366 EGQRFFRSMKDDYGSPPKVVHYGCMVDLLGRAGMLKEAHKFIK 494 +G+ F SM +G P+ VHYGCMVDLLGRAG+L+EA + I+ Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631 Score = 63.9 bits (154), Expect = 1e-08 Identities = 34/114 (29%), Positives = 62/114 (54%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 + VTMV V SAC L L+ + V+ +I N+ I + + +ALVDMY +C + ++F Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACS 347 + ++ A +G +A+ +F+ M+ GV+PD ++ L +++CS Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348 Score = 62.4 bits (150), Expect = 4e-08 Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 1/132 (0%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 DK T SAC A +H I D+ + +LV YA CG+ S+ +VF Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIK-QGVKPDGVAFLGVLTACSHSGLV 362 +M E++V +WT+ I A + A+ LF M++ + V P+ V + V++AC+ + Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252 Query: 363 EEGQRFFRSMKD 398 E G++ + +++ Sbjct: 253 ETGEKVYAFIRN 264 Score = 57.8 bits (138), Expect = 9e-07 Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 32/152 (21%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARC---------- 155 D+++M+S S+C L + K H Y+ N + AL+DMY +C Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395 Query: 156 ---------------------GDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAII 272 G+ ++ + F M EK++ +W I + E+AI Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455 Query: 273 LFDEMIKQ-GVKPDGVAFLGVLTACSHSGLVE 365 +F M Q GV DGV + + +AC H G ++ Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALD 487 >ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana] gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana] gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana] Length = 842 Score = 225 bits (573), Expect = 3e-57 Identities = 105/163 (64%), Positives = 135/163 (82%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 D VTM+S+ASACG+LGALDLAKW++YYIE N I D+ L T LVDM++RCGDP+S+M +F Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACSHSGLVE 365 + + +DVSAWTA+IGAMAM G+ E+AI LFD+MI+QG+KPDGVAF+G LTACSH GLV+ Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588 Query: 366 EGQRFFRSMKDDYGSPPKVVHYGCMVDLLGRAGMLKEAHKFIK 494 +G+ F SM +G P+ VHYGCMVDLLGRAG+L+EA + I+ Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631 Score = 63.9 bits (154), Expect = 1e-08 Identities = 34/114 (29%), Positives = 62/114 (54%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 + VTMV V SAC L L+ + V+ +I N+ I + + +ALVDMY +C + ++F Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACS 347 + ++ A +G +A+ +F+ M+ GV+PD ++ L +++CS Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348 Score = 62.4 bits (150), Expect = 4e-08 Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 1/132 (0%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 DK T SAC A +H I D+ + +LV YA CG+ S+ +VF Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIK-QGVKPDGVAFLGVLTACSHSGLV 362 +M E++V +WT+ I A + A+ LF M++ + V P+ V + V++AC+ + Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252 Query: 363 EEGQRFFRSMKD 398 E G++ + +++ Sbjct: 253 ETGEKVYAFIRN 264 Score = 57.8 bits (138), Expect = 9e-07 Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 32/152 (21%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARC---------- 155 D+++M+S S+C L + K H Y+ N + AL+DMY +C Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395 Query: 156 ---------------------GDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAII 272 G+ ++ + F M EK++ +W I + E+AI Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455 Query: 273 LFDEMIKQ-GVKPDGVAFLGVLTACSHSGLVE 365 +F M Q GV DGV + + +AC H G ++ Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALD 487 >ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 904 Score = 224 bits (571), Expect = 6e-57 Identities = 104/163 (63%), Positives = 134/163 (82%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 D VTM+S+ASACG+LGALDLAKW++YYIE N I D+ L T LVDM++RCGDP+S+M +F Sbjct: 468 DGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIF 527 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACSHSGLVE 365 + + +DVSAWTA+IGAMAM G+ E+AI LF+EMI+QG+KPDGV F+G LTAC H GLV+ Sbjct: 528 NSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQ 587 Query: 366 EGQRFFRSMKDDYGSPPKVVHYGCMVDLLGRAGMLKEAHKFIK 494 +G+ F SM+ +G P+ VHYGCMVDLLGRAG+L+EA + IK Sbjct: 588 QGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIK 630 Score = 59.3 bits (142), Expect = 3e-07 Identities = 31/114 (27%), Positives = 62/114 (54%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 + VTMV V SAC L L+ + V+ +I ++ I + + +ALVDMY +C + ++F Sbjct: 234 NSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLF 293 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPDGVAFLGVLTACS 347 + ++ A +G ++A+ + + M+ G++PD ++ L +++CS Sbjct: 294 DEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCS 347 Score = 58.5 bits (140), Expect = 5e-07 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 1/132 (0%) Frame = +3 Query: 6 DKVTMVSVASACGYLGALDLAKWVHYYIENNEITCDMCLSTALVDMYARCGDPQSSMQVF 185 DK T S C +H I + D+ + +LV YA CG+ + +VF Sbjct: 132 DKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVF 191 Query: 186 HKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIK-QGVKPDGVAFLGVLTACSHSGLV 362 +M E++V +WT+ I A + A+ LF M++ + V P+ V + V++AC+ + Sbjct: 192 DEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDL 251 Query: 363 EEGQRFFRSMKD 398 E G++ + ++D Sbjct: 252 ETGEKVYDFIRD 263