BLASTX nr result

ID: Coptis21_contig00021239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021239
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea]                 172   5e-41
ref|XP_002281346.2| PREDICTED: protein VERNALIZATION INSENSITIVE...   160   2e-37
emb|CAN81221.1| hypothetical protein VITISV_003834 [Vitis vinifera]   160   2e-37
ref|XP_002515582.1| conserved hypothetical protein [Ricinus comm...   159   2e-37
ref|XP_002281934.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   159   4e-37

>gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea]
          Length = 696

 Score =  172 bits (435), Expect = 5e-41
 Identities = 82/90 (91%), Positives = 84/90 (93%)
 Frame = -3

Query: 583 GSGRLDGSYEYCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDP 404
           GS  LDGSYEYCVKIIRWLEC+GHIEQEFRMKFLTWFSLRSTEQER VV TYIQTLIDDP
Sbjct: 607 GSNHLDGSYEYCVKIIRWLECKGHIEQEFRMKFLTWFSLRSTEQERKVVNTYIQTLIDDP 666

Query: 403 VSLAGQLVDSFLDIISGKRQRNGFCSKLWH 314
            SLAGQLVDSFLDIISGKR R+GFCSKLWH
Sbjct: 667 SSLAGQLVDSFLDIISGKRLRSGFCSKLWH 696


>ref|XP_002281346.2| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 711

 Score =  160 bits (404), Expect = 2e-37
 Identities = 76/90 (84%), Positives = 81/90 (90%)
 Frame = -3

Query: 583 GSGRLDGSYEYCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDP 404
           GSG LD ++EYCVKIIRWLECEGHI+QEFR+K LTWFSLRSTEQER VV T+IQTLIDDP
Sbjct: 622 GSGCLDENFEYCVKIIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDP 681

Query: 403 VSLAGQLVDSFLDIISGKRQRNGFCSKLWH 314
            SLAGQLVDSF DIIS KR RNGFCSKLWH
Sbjct: 682 SSLAGQLVDSFSDIISNKRPRNGFCSKLWH 711


>emb|CAN81221.1| hypothetical protein VITISV_003834 [Vitis vinifera]
          Length = 707

 Score =  160 bits (404), Expect = 2e-37
 Identities = 76/90 (84%), Positives = 81/90 (90%)
 Frame = -3

Query: 583 GSGRLDGSYEYCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDP 404
           GSG LD ++EYCVKIIRWLECEGHI+QEFR+K LTWFSLRSTEQER VV T+IQTLIDDP
Sbjct: 618 GSGCLDENFEYCVKIIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDP 677

Query: 403 VSLAGQLVDSFLDIISGKRQRNGFCSKLWH 314
            SLAGQLVDSF DIIS KR RNGFCSKLWH
Sbjct: 678 SSLAGQLVDSFSDIISNKRPRNGFCSKLWH 707


>ref|XP_002515582.1| conserved hypothetical protein [Ricinus communis]
           gi|223545526|gb|EEF47031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 725

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/90 (84%), Positives = 80/90 (88%)
 Frame = -3

Query: 583 GSGRLDGSYEYCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDP 404
           GSG LD ++EYCVKIIRWLECEGHI QEFR+K LTWFSLRSTEQER VV T+IQTLIDDP
Sbjct: 636 GSGCLDENFEYCVKIIRWLECEGHINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDP 695

Query: 403 VSLAGQLVDSFLDIISGKRQRNGFCSKLWH 314
            SLAGQLVDSF DIIS KR RNGFCSKLWH
Sbjct: 696 SSLAGQLVDSFSDIISSKRPRNGFCSKLWH 725


>ref|XP_002281934.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 646

 Score =  159 bits (401), Expect = 4e-37
 Identities = 74/90 (82%), Positives = 79/90 (87%)
 Frame = -3

Query: 583 GSGRLDGSYEYCVKIIRWLECEGHIEQEFRMKFLTWFSLRSTEQERMVVITYIQTLIDDP 404
           GSG LD SYEYCVKIIRWLECEGHI QEFRMKFLTWFSLRSTEQER VV  +IQTLI+DP
Sbjct: 557 GSGHLDRSYEYCVKIIRWLECEGHIGQEFRMKFLTWFSLRSTEQERRVVHAFIQTLIEDP 616

Query: 403 VSLAGQLVDSFLDIISGKRQRNGFCSKLWH 314
            SLAGQL+DSF DI+  KR RNGFCS+LWH
Sbjct: 617 SSLAGQLIDSFSDIVKSKRTRNGFCSELWH 646


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