BLASTX nr result

ID: Coptis21_contig00021228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021228
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263942.2| PREDICTED: MORC family CW-type zinc finger p...   340   3e-91
emb|CBI37505.3| unnamed protein product [Vitis vinifera]              340   3e-91
ref|XP_003516515.1| PREDICTED: MORC family CW-type zinc finger p...   325   2e-86
ref|XP_002532483.1| zinc finger protein, putative [Ricinus commu...   314   3e-83
ref|NP_001058096.1| Os06g0622000 [Oryza sativa Japonica Group] g...   301   1e-79

>ref|XP_002263942.2| PREDICTED: MORC family CW-type zinc finger protein 2B-like [Vitis
            vinifera]
          Length = 760

 Score =  340 bits (873), Expect = 3e-91
 Identities = 189/336 (56%), Positives = 230/336 (68%), Gaps = 21/336 (6%)
 Frame = +2

Query: 110  ACTNSESLAPMG--VAPTACTI-----------TSEGTGESLDDSARKRDFKTLNANHTT 250
            AC NS  ++P G  V P+  T            T   +  S+D     +  +     +T 
Sbjct: 153  ACINSRPVSPFGETVVPSCFTAKEFADRSDAYKTGRCSANSVDRCPHNKFTQDTGDYNTL 212

Query: 251  DRVCEQTSAHLHGFESKKGVTCKPNDCVEKNYVQTNPSYLRTLGQTHSGWVFGAIAELVD 430
            D    +T A+     +      K +   EKNYV+ +PSYL+TLGQ HSGW+FGAIAELVD
Sbjct: 213  DF---ETQAYTRSQLN----AVKQDGHSEKNYVRADPSYLKTLGQAHSGWIFGAIAELVD 265

Query: 431  NSRDANATKLDILIESV--KKDGKEIPMLSVIDDGDGMSHQEIVRMLSFGCKAADVNDPA 604
            NSRDA ATKL I IE +  KK G++IPMLSV DDG GM+H+EIVRM+SFG K  D +DP 
Sbjct: 266  NSRDAKATKLGISIEMIYSKKAGEDIPMLSVKDDGQGMTHKEIVRMVSFGHKQPDTDDPD 325

Query: 605  HIGHFGIGFKTGSMKIGRDAIVLTQTAKSRSIGFLSQSLNEGKEILEIPIVSYVRQGLTM 784
            HIG FGIGFKTG+M++GRDA VLTQT+ SRSI FLSQSLNEGK+ LEIPIVSY RQG  M
Sbjct: 326  HIGRFGIGFKTGAMRLGRDAFVLTQTSSSRSIAFLSQSLNEGKDNLEIPIVSYYRQGQFM 385

Query: 785  EFDLSVHTPASAKYNLKIIKEFSPFDEYFI---ATLFTLRGVGTQIYIWNLDEWGSDYCL 955
            E D S+ + A AKYNLK I+EFSPF++Y I   A LF  +G GTQIYIWNLD+WGSDYCL
Sbjct: 386  ELDESIQSEAFAKYNLKAIREFSPFNKYSIGMKAGLFCEKGTGTQIYIWNLDKWGSDYCL 445

Query: 956  DWQDGK---DTLPEGDIFIRSRRIRMRPGQISQKVP 1054
            +W +G     +  +GDIFIRSRR++ RPGQISQKVP
Sbjct: 446  EWHNGMSSGSSFYQGDIFIRSRRVKSRPGQISQKVP 481


>emb|CBI37505.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  340 bits (873), Expect = 3e-91
 Identities = 189/336 (56%), Positives = 230/336 (68%), Gaps = 21/336 (6%)
 Frame = +2

Query: 110  ACTNSESLAPMG--VAPTACTI-----------TSEGTGESLDDSARKRDFKTLNANHTT 250
            AC NS  ++P G  V P+  T            T   +  S+D     +  +     +T 
Sbjct: 10   ACINSRPVSPFGETVVPSCFTAKEFADRSDAYKTGRCSANSVDRCPHNKFTQDTGDYNTL 69

Query: 251  DRVCEQTSAHLHGFESKKGVTCKPNDCVEKNYVQTNPSYLRTLGQTHSGWVFGAIAELVD 430
            D    +T A+     +      K +   EKNYV+ +PSYL+TLGQ HSGW+FGAIAELVD
Sbjct: 70   DF---ETQAYTRSQLN----AVKQDGHSEKNYVRADPSYLKTLGQAHSGWIFGAIAELVD 122

Query: 431  NSRDANATKLDILIESV--KKDGKEIPMLSVIDDGDGMSHQEIVRMLSFGCKAADVNDPA 604
            NSRDA ATKL I IE +  KK G++IPMLSV DDG GM+H+EIVRM+SFG K  D +DP 
Sbjct: 123  NSRDAKATKLGISIEMIYSKKAGEDIPMLSVKDDGQGMTHKEIVRMVSFGHKQPDTDDPD 182

Query: 605  HIGHFGIGFKTGSMKIGRDAIVLTQTAKSRSIGFLSQSLNEGKEILEIPIVSYVRQGLTM 784
            HIG FGIGFKTG+M++GRDA VLTQT+ SRSI FLSQSLNEGK+ LEIPIVSY RQG  M
Sbjct: 183  HIGRFGIGFKTGAMRLGRDAFVLTQTSSSRSIAFLSQSLNEGKDNLEIPIVSYYRQGQFM 242

Query: 785  EFDLSVHTPASAKYNLKIIKEFSPFDEYFI---ATLFTLRGVGTQIYIWNLDEWGSDYCL 955
            E D S+ + A AKYNLK I+EFSPF++Y I   A LF  +G GTQIYIWNLD+WGSDYCL
Sbjct: 243  ELDESIQSEAFAKYNLKAIREFSPFNKYSIGMKAGLFCEKGTGTQIYIWNLDKWGSDYCL 302

Query: 956  DWQDGK---DTLPEGDIFIRSRRIRMRPGQISQKVP 1054
            +W +G     +  +GDIFIRSRR++ RPGQISQKVP
Sbjct: 303  EWHNGMSSGSSFYQGDIFIRSRRVKSRPGQISQKVP 338


>ref|XP_003516515.1| PREDICTED: MORC family CW-type zinc finger protein 3-like [Glycine
            max]
          Length = 692

 Score =  325 bits (832), Expect = 2e-86
 Identities = 160/247 (64%), Positives = 197/247 (79%), Gaps = 8/247 (3%)
 Frame = +2

Query: 338  KNYVQTNPSYLRTLGQTHSGWVFGAIAELVDNSRDANATKLDILIE--SVKKDGKEIPML 511
            KN+++ +PSYL+TLGQ HSGW+FG IAELVDNSRDA ATK+DI ++  ++KK GK++PML
Sbjct: 168  KNFIRVDPSYLKTLGQVHSGWIFGGIAELVDNSRDAKATKMDIFVDLINLKKSGKDVPML 227

Query: 512  SVIDDGDGMSHQEIVRMLSFGCKAADVNDPAHIGHFGIGFKTGSMKIGRDAIVLTQTAKS 691
            SVIDDG+GM+H E+++M+SFG K +D +D  HIG FG+GFKTG+M++GRD +VLTQT  S
Sbjct: 228  SVIDDGNGMNHAEVMKMVSFGHKQSDKDDKDHIGKFGVGFKTGAMRLGRDVLVLTQTTNS 287

Query: 692  RSIGFLSQSLNEGKEILEIPIVSYVRQGLTMEFDLSVHTPASAKYNLKIIKEFSPFDEYF 871
            RS+ FLSQSLNEGK+ +EIPIVSY R G  ME DLS+ + A AKYNLK IKEFSPF++Y 
Sbjct: 288  RSLAFLSQSLNEGKDNIEIPIVSYCRHGQRMEVDLSMQSEALAKYNLKAIKEFSPFNKYL 347

Query: 872  I---ATLFTLRGVGTQIYIWNLDEWGSDYCLDWQD---GKDTLPEGDIFIRSRRIRMRPG 1033
            I   A LF   G GTQIYIWNLDEWGS YCL+W D   G  +  +GDI I S+RIR RPG
Sbjct: 348  IGEKAALFG-GGTGTQIYIWNLDEWGSKYCLEWHDGLKGGSSFHQGDILISSKRIRSRPG 406

Query: 1034 QISQKVP 1054
            QISQKVP
Sbjct: 407  QISQKVP 413


>ref|XP_002532483.1| zinc finger protein, putative [Ricinus communis]
            gi|223527808|gb|EEF29907.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 754

 Score =  314 bits (804), Expect = 3e-83
 Identities = 160/247 (64%), Positives = 195/247 (78%), Gaps = 8/247 (3%)
 Frame = +2

Query: 338  KNYVQTNPSYLRTLGQTHSGWVFGAIAELVDNSRDANATKLDILIESV--KKDGKEIPML 511
            +NYV+ +PSYL+TLGQ HSGW+FGAIAELVDNSRDA A++LDILIE++  K+ GK+IPML
Sbjct: 240  ENYVRADPSYLQTLGQAHSGWIFGAIAELVDNSRDAKASRLDILIETIYSKRAGKDIPML 299

Query: 512  SVIDDGDGMSHQEIVRMLSFGCKAADVNDPAHIGHFGIGFKTGSMKIGRDAIVLTQTAKS 691
            S+IDDG GM+HQE++RM  FG K  DV+D   IG FG+GFKTG+M++GRDA+VLTQT+ S
Sbjct: 300  SIIDDGHGMTHQEVMRMTCFGHKQPDVDDLDRIGRFGVGFKTGAMRLGRDALVLTQTSCS 359

Query: 692  RSIGFLSQSLNEGKEILEIPIVSYVRQGLTMEFDLSVHTPASAKYNLKIIKEFSPFDEYF 871
            RSI FLSQSLNEG + LEIPIVSY R+G  ME D +V + A AK NLK IKE S FD+Y 
Sbjct: 360  RSIAFLSQSLNEGNDNLEIPIVSYRRKGQFMEVDTNVQSEALAKNNLKAIKELSHFDKYL 419

Query: 872  I---ATLFTLRGVGTQIYIWNLDEWGSDYCLDWQ---DGKDTLPEGDIFIRSRRIRMRPG 1033
            I   A LF  +  GTQIYIWNLDEWGS YCLDW    +G  +  +GDI IRS+R+R RPG
Sbjct: 420  IGEKAGLFHGKHTGTQIYIWNLDEWGSGYCLDWTTGLNGWSSFHQGDILIRSKRVRSRPG 479

Query: 1034 QISQKVP 1054
            Q++QKVP
Sbjct: 480  QMTQKVP 486


>ref|NP_001058096.1| Os06g0622000 [Oryza sativa Japonica Group]
            gi|51090841|dbj|BAD35369.1| Zinc finger CW-type
            coiled-coil domain protein 3-like [Oryza sativa Japonica
            Group] gi|113596136|dbj|BAF20010.1| Os06g0622000 [Oryza
            sativa Japonica Group]
          Length = 792

 Score =  301 bits (772), Expect = 1e-79
 Identities = 155/256 (60%), Positives = 191/256 (74%), Gaps = 10/256 (3%)
 Frame = +2

Query: 317  KPNDCVEKNYVQTNPSYLRTLGQTHSGWVFGAIAELVDNSRDANATKLDILIESV--KKD 490
            K    + KN+V T+PSYLRTL QTH+GWVFGAIAEL+DNSRDA+A++L+I ++S+  KK 
Sbjct: 213  KRTTTLAKNFVSTDPSYLRTLSQTHAGWVFGAIAELIDNSRDADASRLNISVKSLFSKKA 272

Query: 491  GKEIPMLSVIDDGDGMSHQEIVRMLSFGCKAADVNDPAHIGHFGIGFKTGSMKIGRDAIV 670
             K+IP+LSVIDDG GM+  E++RM+SFG K  D      IG FGIGFKTG+MK+GRDAIV
Sbjct: 273  DKKIPVLSVIDDGHGMTCAEMMRMISFGHKRPDKQRQDQIGRFGIGFKTGAMKLGRDAIV 332

Query: 671  LTQTAKSRSIGFLSQSLNEGKEILEIPIVSYVRQGLTMEFDLSVHTPASAKYNLKIIKEF 850
            LTQT+ SRS+ FLSQS NE K+ LEIP+V+Y ++G  ME D SV + A+A+YNL  IKEF
Sbjct: 333  LTQTSSSRSVAFLSQSFNENKDNLEIPVVTYRKEGQYMEVDSSVQSEATAEYNLNAIKEF 392

Query: 851  SPFDEYFIAT---LFTLRGVGTQIYIWNLDEWGSDYCLDWQDGKDTLP-----EGDIFIR 1006
            SPF+EYFI     +F   G GTQIYIWNLD WG+DY LDW  GK +        GDI IR
Sbjct: 393  SPFNEYFIGEKLGIFGEDGTGTQIYIWNLDRWGADYTLDWSSGKPSEDPVHHGRGDILIR 452

Query: 1007 SRRIRMRPGQISQKVP 1054
            SRR+R+RPGQ S  VP
Sbjct: 453  SRRVRLRPGQTSNNVP 468


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